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RHBDD2
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  • RHBDD2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:249.3 nTPM
FANTOM5:311.8 Scaled Tags Per Million
Pig:164.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051960
Glial cells Not detected
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

249.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 249.3
Samples: 246

Max nTPM: 445.2
Min nTPM: 99.6
Std nTPM: 69.3
Median nTPM: 248.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 445.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 444.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 441.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 430.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 422.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 391.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 390.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 390.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 387.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 386.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 381.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 379.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 378.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 378.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 377.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 377.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 359.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 358.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 358.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 357.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 356.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 348.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 347.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 345.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 340.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 338.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 337.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 335.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 334.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 329.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 326.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 325.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 323.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 322.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 321.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 320.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 319.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 318.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 318.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 314.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 314.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 312.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 312.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 311.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 311.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 310.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 309.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 308.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 308.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 307.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 306.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 305.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 300.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 300.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 299.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 294.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 294.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 293.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 293.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 292.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 292.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 292.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 288.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 287.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 287.3
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 286.1
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 285.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 283.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 283.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 283.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 282.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 282.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 281.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 280.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 280.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 280.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 280.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 279.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 279.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 279.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 278.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 278.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 277.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 276.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 275.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 275.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 270.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 268.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 267.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 267.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 266.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 266.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 266.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 265.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 265.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 265.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 265.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 264.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 264.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 263.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 263.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 261.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 261.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 258.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 258.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 257.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 257.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 257.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 257.0
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 256.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 256.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 256.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 255.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 255.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 255.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 254.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 253.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 253.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 252.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 251.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 251.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 249.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 249.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 248.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 248.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 247.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 246.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 246.0
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 243.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 243.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 243.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 243.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 242.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 242.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 240.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 240.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 240.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 237.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 234.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 233.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 232.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 232.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 230.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 229.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 229.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 229.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 227.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 227.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 226.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 226.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 222.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 222.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 220.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 219.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 217.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 216.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 216.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 216.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 216.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 215.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 215.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 214.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 213.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 212.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 211.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 211.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 211.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 211.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 210.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 210.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 210.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 208.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 208.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 206.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 205.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 205.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 204.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 200.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 199.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 199.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 198.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 198.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 197.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 197.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 196.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 196.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 196.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 196.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 193.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 192.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 191.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 190.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 189.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 187.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 187.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 186.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 185.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 185.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 185.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 183.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 182.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 182.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 182.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 182.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 179.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 178.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 178.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 176.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 176.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 175.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 175.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 175.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 175.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 175.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 173.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 166.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 164.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 162.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 162.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 162.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 162.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 162.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 160.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 158.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 158.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 158.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 157.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 157.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 156.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 156.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 156.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 155.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 153.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 151.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 146.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 146.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 139.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 136.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 132.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 127.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 121.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 112.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 111.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 99.6
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

311.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 311.8
FF:10164-103B2 76 years, female 311.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

164.3
Pig sample Sample description nTPM
Caudate
nTPM: 164.3
Samples: 4

Max nTPM: 192.9
Min nTPM: 140.7
Sample A Female 140.7
Sample B Female 175.5
Sample C Male 192.9
Sample D Male 148.2

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