PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:167.6 nTPM
FANTOM5:148.1 Scaled Tags Per Million
Pig:39.2 nTPM
Mouse:19.1 nTPM
Allen mouse:1.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 167.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 145.7
2188 Female, age 91, both hemispheres 197.4
1984 Male, age 76, both hemispheres 133.0
2090 Male, age 80, both hemispheres 128.7
2301 Female, age 85, both hemispheres 123.7
Area postrema
nTPM: 132.2
2799 Male, age 61, both hemispheres 181.7
2306 Male, age 80, both hemispheres 129.2
2054 Male, age 76, both hemispheres 85.6
Dorsal cochlear nucleus
nTPM: 123.0
2187 Female, age 91, both hemispheres 149.2
2802 Male, age 74, right hemisphere 145.4
2378 Male, age 80, both hemispheres 114.4
2370 Male, age 61, both hemispheres 109.0
2058 Male, age 76, both hemispheres 96.9
Dorsal medullary reticular nucleus
nTPM: 110.7
2373 Male, age 61, both hemispheres 121.6
2088 Male, age 76, both hemispheres 121.4
2040 Female, age 85, both hemispheres 89.3
Dorsal motor vagal complex
nTPM: 98.2
2643 Male, age 74, both hemispheres 135.2
2185 Male, age 76, both hemispheres 130.2
2797 Male, age 61, both hemispheres 122.6
2844 Male, age 55, unknown 89.3
2133 Female, age 91, both hemispheres 84.4
2807 Female, age 85, both hemispheres 82.8
2000 Male, age 74, unknown 72.2
2813 Female, age 72, unknown 68.9
Dorsal tegmental nucleus
nTPM: 109.6
2326 Male, age 74, both hemispheres 130.2
2083 Male, age 80, both hemispheres 127.2
2358 Male, age 61, both hemispheres 94.2
1936 Male, age 76, left hemisphere 87.0
Dorsolateral tegmental area
nTPM: 120.2
2337 Male, age 61, both hemispheres 166.1
2654 Male, age 80, both hemispheres 125.9
2751 Female, age 85, both hemispheres 119.9
2360 Male, age 74, both hemispheres 115.1
2141 Male, age 76, both hemispheres 73.9
Gigantocellular reticular nuclei, medullary
nTPM: 112.0
2314 Male, age 61, both hemispheres 163.4
2387 Female, age 91, both hemispheres 138.5
1876 Female, age 85, both hemispheres 101.3
2310 Male, age 80, both hemispheres 97.1
2022 Male, age 76, right hemisphere 91.5
2462 Male, age 74, both hemispheres 80.2
Gigantocellular reticular nuclei, pars
nTPM: 98.9
2336 Male, age 61, both hemispheres 127.3
2706 Male, age 80, both hemispheres 105.8
2330 Male, age 80, both hemispheres 103.7
2084 Female, age 85, both hemispheres 80.9
2168 Male, age 76, both hemispheres 76.5
Inferior olive
nTPM: 123.1
2178 Male, age 61, both hemispheres 139.3
2628 Female, age 91, both hemispheres 137.7
2379 Male, age 80, both hemispheres 116.9
2085 Female, age 85, both hemispheres 114.5
2563 Male, age 74, both hemispheres 107.3
Kolliker-Fuse nucleus
nTPM: 129.3
2793 Female, age 91, left hemisphere 202.0
2163 Male, age 80, both hemispheres 99.6
2315 Male, age 76, right hemisphere 86.4
Lateral lemniscal nuclei
nTPM: 115.0
2320 Female, age 91, left hemisphere 163.4
2453 Male, age 74, right hemisphere 110.6
2036 Male, age 80, both hemispheres 108.6
2746 Female, age 85, left hemisphere 105.2
2169 Male, age 76, both hemispheres 87.1
Lateral medullary reticular nucleus
nTPM: 146.0
2852 Male, age 80, both hemispheres 168.1
2305 Male, age 74, both hemispheres 165.2
2374 Male, age 61, both hemispheres 158.0
2804 Female, age 91, both hemispheres 157.7
2190 Female, age 85, both hemispheres 120.6
2044 Male, age 76, both hemispheres 106.1
Lateral parabrachial nucleus
nTPM: 116.4
2792 Male, age 76, both hemispheres 165.3
2013 Male, age 80, both hemispheres 115.7
2790 Male, age 61, both hemispheres 110.2
2139 Female, age 85, right hemisphere 74.3
Lateral vestibular nucleus
nTPM: 107.5
2311 Male, age 80, both hemispheres 119.0
2184 Male, age 76, both hemispheres 96.0
Locus coeruleus
nTPM: 78.9
2720 Male, age 74, both hemispheres 103.2
2162 Male, age 80, both hemispheres 84.9
2317 Female, age 72, unknown 79.7
2123 Female, age 91, both hemispheres 78.7
2014 Male, age 55, unknown 75.6
2788 Male, age 74, unknown 65.1
1980 Male, age 76, both hemispheres 64.8
Medial olivary nucleus
nTPM: 143.5
1943 Male, age 61, both hemispheres 170.8
1962 Male, age 76, both hemispheres 155.6
2138 Female, age 91, both hemispheres 130.0
2851 Male, age 80, both hemispheres 117.6
Medial parabrachial nucleus
nTPM: 134.5
2170 Female, age 91, both hemispheres 178.7
2463 Female, age 85, right hemisphere 167.1
2854 Male, age 80, both hemispheres 113.3
2786 Male, age 76, both hemispheres 109.3
2156 Male, age 61, both hemispheres 104.1
Medial periolivary nuclei
nTPM: 106.6
2081 Male, age 80, both hemispheres 134.8
2791 Male, age 74, right hemisphere 132.1
2458 Female, age 91, both hemispheres 125.9
2063 Male, age 76, both hemispheres 81.2
2171 Female, age 85, both hemispheres 59.1
Medial vestibular nucleus
nTPM: 103.7
2801 Male, age 74, both hemispheres 143.2
2803 Female, age 91, both hemispheres 139.5
2624 Male, age 61, both hemispheres 108.9
2093 Male, age 80, both hemispheres 103.7
2743 Female, age 85, both hemispheres 75.9
2134 Male, age 76, both hemispheres 51.1
Motor facial nucleus
nTPM: 105.5
2126 Male, age 61, both hemispheres 128.9
2365 Male, age 74, right hemisphere 124.9
2697 Female, age 85, both hemispheres 110.6
2795 Female, age 91, both hemispheres 109.5
2327 Male, age 80, both hemispheres 84.2
2062 Male, age 76, both hemispheres 74.6
Motor hypoglossal nucleus
nTPM: 102.0
2125 Female, age 91, both hemispheres 136.4
2182 Male, age 80, both hemispheres 131.7
2132 Female, age 85, both hemispheres 98.1
2461 Male, age 61, both hemispheres 73.8
2277 Male, age 76, both hemispheres 70.1
Motor trigeminal nucleus
nTPM: 121.0
2560 Male, age 74, both hemispheres 142.1
2321 Female, age 91, both hemispheres 139.9
2309 Male, age 76, both hemispheres 110.8
2079 Male, age 80, both hemispheres 109.8
2335 Male, age 61, both hemispheres 102.5
Nuclei of the trapezoid body
nTPM: 87.9
2368 Female, age 91, both hemispheres 114.8
2166 Male, age 80, both hemispheres 114.5
2159 Male, age 61, both hemispheres 83.8
1983 Male, age 76, both hemispheres 73.7
2735 Female, age 85, both hemispheres 52.9
Nucleus ambiguus
nTPM: 124.3
2071 Male, age 76, both hemispheres 156.0
2096 Female, age 85, both hemispheres 92.6
Nucleus cuneatus
nTPM: 132.5
2380 Male, age 80, both hemispheres 156.9
2564 Male, age 74, both hemispheres 155.6
2805 Female, age 91, both hemispheres 152.7
2381 Male, age 80, both hemispheres 139.4
2100 Male, age 76, both hemispheres 129.3
2808 Female, age 85, both hemispheres 125.4
2376 Male, age 61, both hemispheres 124.8
2131 Male, age 76, both hemispheres 104.6
2562 Male, age 61, both hemispheres 103.7
Nucleus gracilis
nTPM: 140.9
2382 Male, age 80, both hemispheres 157.7
2627 Male, age 74, both hemispheres 153.4
2299 Female, age 85, both hemispheres 111.6
Nucleus raphe magnus
nTPM: 88.5
2459 Female, age 91, both hemispheres 129.0
2051 Male, age 76, both hemispheres 101.5
2328 Male, age 80, both hemispheres 98.8
2455 Male, age 74, both hemispheres 97.2
2160 Male, age 61, both hemispheres 59.6
2172 Female, age 85, both hemispheres 45.1
Nucleus raphe obscurus
nTPM: 167.6
2800 Male, age 61, midline 177.2
2142 Male, age 76, midline 163.7
2845 Female, age 85, midline 162.0
Nucleus raphe pallidus
nTPM: 147.7
2145 Male, age 76, midline 194.1
1924 Male, age 61, midline 141.0
2183 Male, age 80, midline 108.0
Nucleus tractus solitarii
nTPM: 65.8
2656 Male, age 76, both hemispheres 90.6
2307 Male, age 80, both hemispheres 64.1
2191 Female, age 85, both hemispheres 61.2
2144 Female, age 91, right hemisphere 47.3
Paramedian reticular nucleus
nTPM: 97.1
2052 Male, age 76, both hemispheres 115.5
2057 Male, age 80, both hemispheres 108.6
2313 Male, age 61, both hemispheres 83.2
2050 Female, age 85, both hemispheres 81.3
Parvicellular reticular nuclei
nTPM: 117.0
2558 Male, age 74, both hemispheres 120.4
2095 Male, age 76, both hemispheres 115.2
2119 Male, age 80, both hemispheres 115.2
Parvicellular reticular nuclei, medullary
nTPM: 96.5
2189 Female, age 91, both hemispheres 120.9
2181 Male, age 80, left hemisphere 97.9
2091 Female, age 85, both hemispheres 70.6
Pedunculopontine tegmental nucleus
nTPM: 107.2
2338 Male, age 61, both hemispheres 121.2
1921 Female, age 85, both hemispheres 100.8
2334 Male, age 80, both hemispheres 99.6
Peritrigeminal nucleus
nTPM: 101.5
2136 Male, age 76, both hemispheres 107.7
2179 Male, age 61, both hemispheres 102.7
2067 Female, age 85, both hemispheres 94.1
Pontine nuclei
nTPM: 116.9
2319 Female, age 91, both hemispheres 178.7
2454 Male, age 74, left hemisphere 168.8
2115 Male, age 80, left hemisphere 126.3
2109 Female, age 72, unknown 111.9
1968 Male, age 76, left hemisphere 105.3
1863 Male, age 55, unknown 102.3
2727 Male, age 61, right hemisphere 74.6
2787 Female, age 85, both hemispheres 67.5
Pontine raphe nucleus
nTPM: 84.4
2853 Male, age 76, midline 97.1
2122 Female, age 85, midline 71.8
Posteroventral cochlear nucleus
nTPM: 137.8
2135 Female, age 91, both hemispheres 228.5
2341 Male, age 80, both hemispheres 156.8
2070 Male, age 76, both hemispheres 119.5
2371 Male, age 61, both hemispheres 112.5
2752 Female, age 85, both hemispheres 71.9
Prepositus hypoglossal nucleus
nTPM: 84.5
2855 Female, age 85, right hemisphere 101.0
2086 Male, age 80, both hemispheres 68.0
Principal sensory trigeminal nucleus
nTPM: 103.3
2367 Female, age 91, left hemisphere 165.4
2324 Male, age 76, both hemispheres 89.1
2008 Male, age 80, left hemisphere 86.3
2158 Male, age 61, both hemispheres 72.6
Reticular pontine nucleus, caudal
nTPM: 128.0
2559 Male, age 74, both hemispheres 174.8
2457 Female, age 91, both hemispheres 139.7
2092 Male, age 76, both hemispheres 112.2
2332 Male, age 80, right hemisphere 85.2
Reticular pontine nucleus, oral
nTPM: 131.8
2366 Female, age 91, both hemispheres 178.6
2361 Male, age 74, both hemispheres 132.4
1939 Male, age 80, both hemispheres 128.8
2167 Male, age 76, both hemispheres 127.9
2012 Female, age 85, both hemispheres 91.2
Reticulotegmental nucleus
nTPM: 110.6
2452 Male, age 74, both hemispheres 136.8
2322 Female, age 91, both hemispheres 125.2
2333 Male, age 80, both hemispheres 105.3
2325 Male, age 76, both hemispheres 74.9
Spinal trigeminal nucleus, caudal
nTPM: 122.9
2312 Male, age 61, both hemispheres 138.2
2642 Male, age 74, both hemispheres 135.2
2308 Male, age 80, both hemispheres 125.7
2447 Male, age 76, both hemispheres 109.1
2390 Female, age 91, both hemispheres 106.3
Spinal trigeminal nucleus, interpolar
nTPM: 90.2
2389 Female, age 91, both hemispheres 106.9
2033 Male, age 80, both hemispheres 101.4
2386 Female, age 85, both hemispheres 95.7
2066 Male, age 76, right hemisphere 73.5
2625 Male, age 61, both hemispheres 73.3
Spinal trigeminal nucleus, oral
nTPM: 105.0
1978 Male, age 76, both hemispheres 123.1
2164 Male, age 80, both hemispheres 101.6
2737 Female, age 85, both hemispheres 90.4
Spinal vestibular nucleus
nTPM: 116.5
2384 Male, age 74, both hemispheres 165.6
2748 Male, age 76, both hemispheres 128.0
2186 Female, age 91, both hemispheres 121.2
2780 Male, age 80, both hemispheres 99.4
2806 Female, age 85, both hemispheres 98.1
2796 Male, age 61, both hemispheres 86.6
Subcoeruleus area
nTPM: 110.8
2369 Female, age 85, left hemisphere 137.1
2451 Male, age 74, both hemispheres 122.5
2089 Male, age 76, left hemisphere 101.2
1958 Male, age 80, both hemispheres 100.8
2323 Female, age 91, left hemisphere 92.4
Superior olive
nTPM: 116.8
2020 Male, age 76, both hemispheres 131.2
2364 Male, age 74, right hemisphere 129.4
2561 Female, age 91, both hemispheres 126.6
2329 Male, age 80, right hemisphere 112.9
1875 Female, age 85, both hemispheres 83.7
Superior vestibular nucleus
nTPM: 99.1
2383 Male, age 74, both hemispheres 103.8
2015 Male, age 80, both hemispheres 102.1
2061 Male, age 76, both hemispheres 91.5
Ventral medullary reticular nucleus
nTPM: 142.7
2372 Male, age 61, both hemispheres 152.3
2060 Male, age 76, both hemispheres 133.2
Ventral periolivary nuclei
nTPM: 100.9
2023 Male, age 76, both hemispheres 141.4
2794 Female, age 91, left hemisphere 107.7
2165 Male, age 80, both hemispheres 88.8
2130 Female, age 85, both hemispheres 65.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 115.3
2118 Male, age 80, both hemispheres 143.9
2180 Male, age 61, both hemispheres 127.3
2302 Female, age 91, both hemispheres 124.0
1986 Male, age 76, both hemispheres 102.8
2741 Female, age 85, both hemispheres 78.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 112.2
2456 Female, age 91, both hemispheres 131.7
2359 Male, age 61, both hemispheres 126.8
2449 Male, age 74, both hemispheres 110.7
2161 Male, age 80, both hemispheres 105.6
1959 Male, age 76, both hemispheres 103.8
2840 Female, age 85, both hemispheres 95.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 148.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 148.1
FF:10182-103D2 60 years, female 155.7
FF:10165-103B3 76 years, female 140.5
Medulla oblongata
Scaled Tags Per Million: 141.6
FF:10038-101F2 18-64 years, mixed 178.8
FF:10155-103A2 76 years, female 154.6
FF:10174-103C3 60 years, female 91.2
Pons
Scaled Tags Per Million: 128.6
FF:10033-101E6 18-54 years, mixed 128.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 39.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 39.2
Samples: 4

Max nTPM: 47.1
Min nTPM: 23.6
Sample A Female 42.2
Sample B Female 23.6
Sample C Male 44.0
Sample D Male 47.1
Pons
nTPM: 35.4
Samples: 4

Max nTPM: 45.5
Min nTPM: 26.0
Sample A Female 45.5
Sample B Female 26.0
Sample C Male 35.2
Sample D Male 35.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 19.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 19.1
Samples: 4

Max nTPM: 20.8
Min nTPM: 16.7
Sample A Male 20.8
Sample B Male 16.7
Sample C Female 18.7
Sample D Female 20.2

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.9
73992909 Antisense, RP_051214_01_F03, Mouse strain C57BL/6J (56 days, male) 2.2
69672808 Antisense, RP_050428_04_E06, Mouse strain C57BL/6J (56 days, male) 1.7
Pons
Expression energy: 1.8
73992909 Antisense, RP_051214_01_F03, Mouse strain C57BL/6J (56 days, male) 2.2
69672808 Antisense, RP_050428_04_E06, Mouse strain C57BL/6J (56 days, male) 1.3

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