PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:146.4 nTPM
FANTOM5:246.9 Scaled Tags Per Million
Pig:79.8 nTPM
Mouse:56.6 nTPM
Allen mouse:0.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 146.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 45.9
2301 Female, age 85, both hemispheres 71.7
1984 Male, age 76, both hemispheres 45.4
2090 Male, age 80, both hemispheres 34.3
2188 Female, age 91, both hemispheres 32.0
Area postrema
nTPM: 90.9
2799 Male, age 61, both hemispheres 160.1
2054 Male, age 76, both hemispheres 60.7
2306 Male, age 80, both hemispheres 52.1
Dorsal cochlear nucleus
nTPM: 47.6
2370 Male, age 61, both hemispheres 64.2
2058 Male, age 76, both hemispheres 60.3
2187 Female, age 91, both hemispheres 46.2
2378 Male, age 80, both hemispheres 38.0
2802 Male, age 74, right hemisphere 29.3
Dorsal medullary reticular nucleus
nTPM: 41.8
2373 Male, age 61, both hemispheres 42.4
2088 Male, age 76, both hemispheres 41.9
2040 Female, age 85, both hemispheres 41.1
Dorsal motor vagal complex
nTPM: 59.2
2813 Female, age 72, unknown 104.3
2000 Male, age 74, unknown 67.0
2133 Female, age 91, both hemispheres 54.5
2643 Male, age 74, both hemispheres 54.1
2185 Male, age 76, both hemispheres 53.4
2797 Male, age 61, both hemispheres 50.1
2844 Male, age 55, unknown 47.8
2807 Female, age 85, both hemispheres 42.4
Dorsal tegmental nucleus
nTPM: 146.4
2358 Male, age 61, both hemispheres 342.9
1936 Male, age 76, left hemisphere 98.9
2083 Male, age 80, both hemispheres 80.5
2326 Male, age 74, both hemispheres 63.4
Dorsolateral tegmental area
nTPM: 97.6
2337 Male, age 61, both hemispheres 147.9
2360 Male, age 74, both hemispheres 112.5
2141 Male, age 76, both hemispheres 87.9
2751 Female, age 85, both hemispheres 70.6
2654 Male, age 80, both hemispheres 69.3
Gigantocellular reticular nuclei, medullary
nTPM: 44.7
1876 Female, age 85, both hemispheres 63.7
2462 Male, age 74, both hemispheres 53.8
2314 Male, age 61, both hemispheres 47.4
2022 Male, age 76, right hemisphere 41.5
2387 Female, age 91, both hemispheres 34.4
2310 Male, age 80, both hemispheres 27.5
Gigantocellular reticular nuclei, pars
nTPM: 42.1
2084 Female, age 85, both hemispheres 60.8
2336 Male, age 61, both hemispheres 53.0
2168 Male, age 76, both hemispheres 32.8
2706 Male, age 80, both hemispheres 32.3
2330 Male, age 80, both hemispheres 31.6
Inferior olive
nTPM: 68.6
2379 Male, age 80, both hemispheres 71.4
2628 Female, age 91, both hemispheres 70.4
2085 Female, age 85, both hemispheres 68.8
2178 Male, age 61, both hemispheres 66.8
2563 Male, age 74, both hemispheres 65.5
Kolliker-Fuse nucleus
nTPM: 82.4
2315 Male, age 76, right hemisphere 137.6
2163 Male, age 80, both hemispheres 70.4
2793 Female, age 91, left hemisphere 39.2
Lateral lemniscal nuclei
nTPM: 29.6
2746 Female, age 85, left hemisphere 43.0
2169 Male, age 76, both hemispheres 37.8
2036 Male, age 80, both hemispheres 26.3
2453 Male, age 74, right hemisphere 20.7
2320 Female, age 91, left hemisphere 20.1
Lateral medullary reticular nucleus
nTPM: 62.3
2374 Male, age 61, both hemispheres 76.0
2190 Female, age 85, both hemispheres 68.0
2305 Male, age 74, both hemispheres 65.1
2804 Female, age 91, both hemispheres 57.1
2044 Male, age 76, both hemispheres 54.6
2852 Male, age 80, both hemispheres 53.1
Lateral parabrachial nucleus
nTPM: 78.6
2790 Male, age 61, both hemispheres 93.2
2792 Male, age 76, both hemispheres 87.3
2139 Female, age 85, right hemisphere 72.1
2013 Male, age 80, both hemispheres 61.9
Lateral vestibular nucleus
nTPM: 59.3
2311 Male, age 80, both hemispheres 64.1
2184 Male, age 76, both hemispheres 54.6
Locus coeruleus
nTPM: 85.2
2788 Male, age 74, unknown 94.1
2317 Female, age 72, unknown 91.9
2720 Male, age 74, both hemispheres 88.1
1980 Male, age 76, both hemispheres 86.5
2162 Male, age 80, both hemispheres 84.1
2014 Male, age 55, unknown 76.6
2123 Female, age 91, both hemispheres 75.3
Medial olivary nucleus
nTPM: 90.3
1943 Male, age 61, both hemispheres 101.9
1962 Male, age 76, both hemispheres 99.4
2851 Male, age 80, both hemispheres 92.4
2138 Female, age 91, both hemispheres 67.6
Medial parabrachial nucleus
nTPM: 65.8
2156 Male, age 61, both hemispheres 114.7
2786 Male, age 76, both hemispheres 59.2
2854 Male, age 80, both hemispheres 53.2
2170 Female, age 91, both hemispheres 51.7
2463 Female, age 85, right hemisphere 50.4
Medial periolivary nuclei
nTPM: 37.5
2791 Male, age 74, right hemisphere 61.0
2171 Female, age 85, both hemispheres 38.5
2063 Male, age 76, both hemispheres 36.1
2458 Female, age 91, both hemispheres 27.1
2081 Male, age 80, both hemispheres 24.8
Medial vestibular nucleus
nTPM: 70.9
2624 Male, age 61, both hemispheres 115.9
2743 Female, age 85, both hemispheres 73.8
2134 Male, age 76, both hemispheres 69.8
2801 Male, age 74, both hemispheres 64.2
2093 Male, age 80, both hemispheres 50.9
2803 Female, age 91, both hemispheres 50.7
Motor facial nucleus
nTPM: 36.2
2697 Female, age 85, both hemispheres 47.3
2365 Male, age 74, right hemisphere 46.9
2062 Male, age 76, both hemispheres 39.9
2795 Female, age 91, both hemispheres 35.2
2126 Male, age 61, both hemispheres 33.9
2327 Male, age 80, both hemispheres 14.1
Motor hypoglossal nucleus
nTPM: 61.1
2461 Male, age 61, both hemispheres 128.0
2277 Male, age 76, both hemispheres 58.8
2182 Male, age 80, both hemispheres 46.3
2125 Female, age 91, both hemispheres 42.1
2132 Female, age 85, both hemispheres 30.1
Motor trigeminal nucleus
nTPM: 40.1
2335 Male, age 61, both hemispheres 81.7
2309 Male, age 76, both hemispheres 53.0
2079 Male, age 80, both hemispheres 27.8
2321 Female, age 91, both hemispheres 20.0
2560 Male, age 74, both hemispheres 17.9
Nuclei of the trapezoid body
nTPM: 32.3
1983 Male, age 76, both hemispheres 46.3
2735 Female, age 85, both hemispheres 36.5
2166 Male, age 80, both hemispheres 30.9
2368 Female, age 91, both hemispheres 26.6
2159 Male, age 61, both hemispheres 21.1
Nucleus ambiguus
nTPM: 56.2
2071 Male, age 76, both hemispheres 88.2
2096 Female, age 85, both hemispheres 24.2
Nucleus cuneatus
nTPM: 44.0
2564 Male, age 74, both hemispheres 65.7
2808 Female, age 85, both hemispheres 64.0
2562 Male, age 61, both hemispheres 58.8
2381 Male, age 80, both hemispheres 39.0
2376 Male, age 61, both hemispheres 38.7
2380 Male, age 80, both hemispheres 37.9
2131 Male, age 76, both hemispheres 31.6
2805 Female, age 91, both hemispheres 30.7
2100 Male, age 76, both hemispheres 29.9
Nucleus gracilis
nTPM: 66.8
2627 Male, age 74, both hemispheres 117.2
2299 Female, age 85, both hemispheres 52.1
2382 Male, age 80, both hemispheres 31.0
Nucleus raphe magnus
nTPM: 31.6
2455 Male, age 74, both hemispheres 47.2
2051 Male, age 76, both hemispheres 39.9
2172 Female, age 85, both hemispheres 28.9
2328 Male, age 80, both hemispheres 28.1
2160 Male, age 61, both hemispheres 25.0
2459 Female, age 91, both hemispheres 20.3
Nucleus raphe obscurus
nTPM: 58.1
2142 Male, age 76, midline 86.4
2800 Male, age 61, midline 48.8
2845 Female, age 85, midline 39.0
Nucleus raphe pallidus
nTPM: 124.3
1924 Male, age 61, midline 215.6
2183 Male, age 80, midline 84.0
2145 Male, age 76, midline 73.3
Nucleus tractus solitarii
nTPM: 74.3
2144 Female, age 91, right hemisphere 117.7
2191 Female, age 85, both hemispheres 89.7
2656 Male, age 76, both hemispheres 49.3
2307 Male, age 80, both hemispheres 40.4
Paramedian reticular nucleus
nTPM: 51.9
2052 Male, age 76, both hemispheres 58.6
2313 Male, age 61, both hemispheres 52.7
2057 Male, age 80, both hemispheres 52.6
2050 Female, age 85, both hemispheres 43.6
Parvicellular reticular nuclei
nTPM: 47.4
2119 Male, age 80, both hemispheres 72.2
2095 Male, age 76, both hemispheres 52.4
2558 Male, age 74, both hemispheres 17.6
Parvicellular reticular nuclei, medullary
nTPM: 49.3
2189 Female, age 91, both hemispheres 61.0
2091 Female, age 85, both hemispheres 43.5
2181 Male, age 80, left hemisphere 43.4
Pedunculopontine tegmental nucleus
nTPM: 119.1
2338 Male, age 61, both hemispheres 182.5
2334 Male, age 80, both hemispheres 95.1
1921 Female, age 85, both hemispheres 79.7
Peritrigeminal nucleus
nTPM: 81.8
2179 Male, age 61, both hemispheres 87.2
2067 Female, age 85, both hemispheres 84.1
2136 Male, age 76, both hemispheres 74.1
Pontine nuclei
nTPM: 25.9
2787 Female, age 85, both hemispheres 41.6
1863 Male, age 55, unknown 34.5
2115 Male, age 80, left hemisphere 29.4
1968 Male, age 76, left hemisphere 29.2
2319 Female, age 91, both hemispheres 24.0
2727 Male, age 61, right hemisphere 20.8
2109 Female, age 72, unknown 17.2
2454 Male, age 74, left hemisphere 10.6
Pontine raphe nucleus
nTPM: 56.5
2853 Male, age 76, midline 69.0
2122 Female, age 85, midline 43.9
Posteroventral cochlear nucleus
nTPM: 46.8
2371 Male, age 61, both hemispheres 62.2
2070 Male, age 76, both hemispheres 54.4
2752 Female, age 85, both hemispheres 53.8
2341 Male, age 80, both hemispheres 40.9
2135 Female, age 91, both hemispheres 22.6
Prepositus hypoglossal nucleus
nTPM: 62.9
2855 Female, age 85, right hemisphere 64.2
2086 Male, age 80, both hemispheres 61.6
Principal sensory trigeminal nucleus
nTPM: 39.6
2324 Male, age 76, both hemispheres 68.3
2008 Male, age 80, left hemisphere 40.0
2158 Male, age 61, both hemispheres 29.6
2367 Female, age 91, left hemisphere 20.7
Reticular pontine nucleus, caudal
nTPM: 31.2
2092 Male, age 76, both hemispheres 55.6
2559 Male, age 74, both hemispheres 26.9
2457 Female, age 91, both hemispheres 24.0
2332 Male, age 80, right hemisphere 18.5
Reticular pontine nucleus, oral
nTPM: 54.6
1939 Male, age 80, both hemispheres 115.0
2167 Male, age 76, both hemispheres 83.3
2012 Female, age 85, both hemispheres 46.8
2366 Female, age 91, both hemispheres 27.2
2361 Male, age 74, both hemispheres 0.7
Reticulotegmental nucleus
nTPM: 45.2
2325 Male, age 76, both hemispheres 59.6
2333 Male, age 80, both hemispheres 53.4
2322 Female, age 91, both hemispheres 39.9
2452 Male, age 74, both hemispheres 27.7
Spinal trigeminal nucleus, caudal
nTPM: 45.7
2642 Male, age 74, both hemispheres 57.5
2312 Male, age 61, both hemispheres 53.2
2308 Male, age 80, both hemispheres 41.4
2390 Female, age 91, both hemispheres 39.1
2447 Male, age 76, both hemispheres 37.1
Spinal trigeminal nucleus, interpolar
nTPM: 57.0
2625 Male, age 61, both hemispheres 96.4
2066 Male, age 76, right hemisphere 64.0
2033 Male, age 80, both hemispheres 47.3
2386 Female, age 85, both hemispheres 42.8
2389 Female, age 91, both hemispheres 34.6
Spinal trigeminal nucleus, oral
nTPM: 46.0
2737 Female, age 85, both hemispheres 65.0
1978 Male, age 76, both hemispheres 44.1
2164 Male, age 80, both hemispheres 29.0
Spinal vestibular nucleus
nTPM: 56.5
2796 Male, age 61, both hemispheres 69.0
2748 Male, age 76, both hemispheres 61.5
2806 Female, age 85, both hemispheres 60.2
2186 Female, age 91, both hemispheres 57.3
2780 Male, age 80, both hemispheres 49.0
2384 Male, age 74, both hemispheres 42.0
Subcoeruleus area
nTPM: 56.5
2369 Female, age 85, left hemisphere 69.8
1958 Male, age 80, both hemispheres 67.5
2323 Female, age 91, left hemisphere 65.0
2451 Male, age 74, both hemispheres 46.1
2089 Male, age 76, left hemisphere 34.1
Superior olive
nTPM: 36.5
2364 Male, age 74, right hemisphere 62.7
2020 Male, age 76, both hemispheres 34.6
1875 Female, age 85, both hemispheres 32.2
2329 Male, age 80, right hemisphere 26.8
2561 Female, age 91, both hemispheres 26.2
Superior vestibular nucleus
nTPM: 98.5
2383 Male, age 74, both hemispheres 147.5
2061 Male, age 76, both hemispheres 78.5
2015 Male, age 80, both hemispheres 69.6
Ventral medullary reticular nucleus
nTPM: 46.8
2372 Male, age 61, both hemispheres 48.2
2060 Male, age 76, both hemispheres 45.4
Ventral periolivary nuclei
nTPM: 33.8
2130 Female, age 85, both hemispheres 44.6
2023 Male, age 76, both hemispheres 39.1
2165 Male, age 80, both hemispheres 33.0
2794 Female, age 91, left hemisphere 18.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 55.2
1986 Male, age 76, both hemispheres 69.1
2180 Male, age 61, both hemispheres 60.9
2741 Female, age 85, both hemispheres 59.3
2302 Female, age 91, both hemispheres 49.2
2118 Male, age 80, both hemispheres 37.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 62.2
2359 Male, age 61, both hemispheres 162.4
2840 Female, age 85, both hemispheres 74.3
1959 Male, age 76, both hemispheres 51.2
2161 Male, age 80, both hemispheres 33.6
2449 Male, age 74, both hemispheres 26.9
2456 Female, age 91, both hemispheres 25.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 246.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 246.9
FF:10165-103B3 76 years, female 307.7
FF:10182-103D2 60 years, female 186.0
Medulla oblongata
Scaled Tags Per Million: 207.6
FF:10174-103C3 60 years, female 226.3
FF:10155-103A2 76 years, female 207.4
FF:10038-101F2 18-64 years, mixed 189.1
Pons
Scaled Tags Per Million: 102.2
FF:10033-101E6 18-54 years, mixed 102.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 79.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 78.0
Samples: 4

Max nTPM: 95.0
Min nTPM: 61.7
Sample A Female 61.7
Sample B Female 95.0
Sample C Male 71.9
Sample D Male 83.4
Pons
nTPM: 79.8
Samples: 4

Max nTPM: 105.9
Min nTPM: 64.0
Sample A Female 64.0
Sample B Female 64.8
Sample C Male 105.9
Sample D Male 84.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 56.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 56.6
Samples: 4

Max nTPM: 59.9
Min nTPM: 51.2
Sample A Male 56.6
Sample B Male 51.2
Sample C Female 58.6
Sample D Female 59.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
68269646 Antisense, RP_041129_02_A02, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.0
68269646 Antisense, RP_041129_02_A02, Mouse strain C57BL/6J (56 days, male) 0.0

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