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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:152.7 nTPM
FANTOM5:115.4 Scaled Tags Per Million
Pig:56.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB002490
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

152.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 152.7
Samples: 246

Max nTPM: 376.1
Min nTPM: 36.8
Std nTPM: 63.9
Median nTPM: 140.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 376.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 349.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 339.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 327.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 324.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 309.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 302.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 297.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 289.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 288.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 283.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 275.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 261.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 260.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 255.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 254.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 253.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 249.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 248.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 246.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 246.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 246.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 244.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 244.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 242.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 242.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 241.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 240.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 236.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 236.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 233.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 233.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 231.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 230.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 230.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 228.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 227.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 223.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 219.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 219.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 217.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 217.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 216.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 213.5
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 212.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 210.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 210.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 208.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 208.2
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 207.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 206.5
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 205.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 203.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 203.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 201.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 200.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 196.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 194.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 192.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 190.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 187.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 187.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 186.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 186.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 185.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 183.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 182.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 182.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 182.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 181.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 181.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 181.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 178.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 178.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 177.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 177.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 176.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 176.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 175.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 175.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 174.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 173.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 171.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 170.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 170.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 170.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 168.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 168.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 167.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 167.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 166.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 166.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 165.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 163.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 163.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 161.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 160.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 160.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 158.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 158.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 157.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 157.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 154.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 154.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 154.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 153.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 153.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 152.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 152.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 151.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 149.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 149.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 148.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 147.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 145.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 143.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 142.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 142.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 141.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 140.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 140.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 140.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 139.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 138.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 138.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 137.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 134.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 133.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 133.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 132.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 132.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 131.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 131.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 129.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 129.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 129.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 128.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 128.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 128.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 125.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 125.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 125.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 125.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 124.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 124.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 122.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 122.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 122.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 121.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 121.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 120.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 120.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 120.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 118.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 118.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 116.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 116.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 115.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 115.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 114.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 113.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 113.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 112.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 112.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 112.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 111.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 111.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 111.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 111.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 111.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 110.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 109.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 108.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 107.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 107.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 107.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 107.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 106.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 106.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 106.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 105.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 104.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 104.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 103.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 101.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 100.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 100.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 100.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 99.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 98.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 97.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 97.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 96.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 95.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 95.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 94.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 93.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 93.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 92.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 92.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 91.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 90.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 90.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 90.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 89.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 89.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 88.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 86.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 86.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 85.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 85.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 83.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 82.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 80.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 79.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 78.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 78.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 78.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 75.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 73.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 73.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 73.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 73.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 71.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 69.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 65.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 63.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 61.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 60.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 58.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 57.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 55.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 52.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 42.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 41.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 40.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 36.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

115.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 115.4
FF:10164-103B2 76 years, female 115.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

56.4
Pig sample Sample description nTPM
Caudate
nTPM: 56.5
Samples: 4

Max nTPM: 65.9
Min nTPM: 49.3
Sample A Female 65.9
Sample B Female 49.3
Sample C Male 59.4
Sample D Male 51.2

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