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CLDN11
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:42.7 nTPM
FANTOM5:120.7 Scaled Tags Per Million
Pig:51.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013166Antibody CAB009789
Glial cells Not detectedMedium
Neuronal cells Not detectedLow





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

42.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 42.7
Samples: 246

Max nTPM: 169.9
Min nTPM: 4.2
Std nTPM: 27.3
Median nTPM: 35.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 169.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 145.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 130.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 130.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 107.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 106.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 105.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 100.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 100.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 97.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 94.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 89.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 88.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 86.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 85.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 84.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 83.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 83.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 80.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 79.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 79.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 78.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 78.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 77.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 76.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 76.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 75.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 75.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 75.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 74.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 72.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 71.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 71.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 71.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 69.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 68.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 68.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 67.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 66.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 66.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 65.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 65.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 65.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 64.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 63.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 63.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 63.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 62.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 62.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 62.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 62.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 61.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 60.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 60.7
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 59.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 59.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 57.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 57.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 56.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 55.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 55.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 55.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 54.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 54.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 54.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 53.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 53.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 53.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 52.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 52.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 51.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 51.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 50.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 49.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 48.7
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 48.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 48.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 47.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 45.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 45.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 45.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 44.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 44.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 43.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 43.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 43.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 42.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 42.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 42.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 42.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 41.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 41.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 40.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 40.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 40.4
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 40.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 40.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 39.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 39.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 39.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 38.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 38.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 38.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 38.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 37.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 37.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 37.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 37.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 36.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 36.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 36.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 35.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 35.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 35.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 35.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 34.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 34.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 34.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 34.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 34.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 34.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 34.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 33.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 33.6
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 33.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 33.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 32.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 32.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 32.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 32.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 32.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 31.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 31.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 31.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 30.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 30.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 30.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 30.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 29.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 29.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 29.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 29.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 29.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 29.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 29.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 28.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 28.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 28.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 28.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 28.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 28.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 28.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 27.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 27.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 27.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 26.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 26.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 26.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 26.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 26.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 26.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 25.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 25.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 25.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 25.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 24.4
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 23.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 23.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 23.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 22.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 22.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 22.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 22.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 22.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 22.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 21.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 21.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 20.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 20.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 20.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 20.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 19.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 19.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 19.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 19.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 19.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 19.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 18.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 18.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 18.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 18.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 18.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 18.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 18.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 18.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 18.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 18.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 17.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 17.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 17.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 17.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 17.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 17.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 17.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 16.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 16.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 16.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 16.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 16.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 15.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 14.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 14.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 14.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 14.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 14.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 14.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 14.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 13.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 12.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 12.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 12.5
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 12.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 12.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 12.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 12.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 11.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 11.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 11.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 10.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 7.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 7.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 7.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 6.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 4.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 4.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

120.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 120.7
FF:10164-103B2 76 years, female 120.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

51.1
Pig sample Sample description nTPM
Caudate
nTPM: 51.1
Samples: 4

Max nTPM: 60.8
Min nTPM: 42.3
Sample A Female 60.8
Sample B Female 42.3
Sample C Male 44.4
Sample D Male 56.9

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