PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		63.716
Mouse brain, Intensity
Ponsi 		89.062
RNA expressioni
HPA Brain:67.2 nTPM
FANTOM5:40.1 Scaled Tags Per Million
Pig:20.6 nTPM
Mouse:39.5 nTPM
Allen mouse:6.8 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA056953
Medulla oblongata mean intensity 63.716
intensityi
FRONT BACK
Nucleus of the solitary tract 35.183
Raphe magnus nucleus 39.520
Cochlear nucleus 32.358
Lateral paragigantocellular nucleus 45.886
Raphe pallidus nucleus 35.200
Facial nucleus 39.173
Hypoglossal nucleus 42.077
Ambiguus nucleus 37.585
External cuneate nucleus 31.745
Inferior olivary nucleus 18.032
Raphe obscures nucleus 19.280
Dorsal motor nucleus of vagus 34.797
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 31.014
Parabrachial nucleus 23.624
Principle sensory trigeminal nucleus 62.049
Locus coeruleus 67.202
Pontine nucleus 51.544
Vestibular nucleus 40.395
Pontine reticular nucleus, oral -
Lateral lemniscus 59.515
Superior paraolivary nucleus 43.467

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 67.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 33.8
1984 Male, age 76, both hemispheres 55.1
2301 Female, age 85, both hemispheres 33.4
2188 Female, age 91, both hemispheres 24.5
2090 Male, age 80, both hemispheres 22.2
Area postrema
nTPM: 11.2
2054 Male, age 76, both hemispheres 20.7
2306 Male, age 80, both hemispheres 9.7
2799 Male, age 61, both hemispheres 3.2
Dorsal cochlear nucleus
nTPM: 30.1
2058 Male, age 76, both hemispheres 33.0
2370 Male, age 61, both hemispheres 32.9
2802 Male, age 74, right hemisphere 29.1
2378 Male, age 80, both hemispheres 28.4
2187 Female, age 91, both hemispheres 27.0
Dorsal medullary reticular nucleus
nTPM: 38.7
2088 Male, age 76, both hemispheres 45.1
2373 Male, age 61, both hemispheres 38.6
2040 Female, age 85, both hemispheres 32.4
Dorsal motor vagal complex
nTPM: 25.5
2133 Female, age 91, both hemispheres 36.9
2185 Male, age 76, both hemispheres 28.8
2797 Male, age 61, both hemispheres 26.8
2807 Female, age 85, both hemispheres 24.5
2643 Male, age 74, both hemispheres 23.5
2813 Female, age 72, unknown 23.3
2844 Male, age 55, unknown 20.4
2000 Male, age 74, unknown 20.1
Dorsal tegmental nucleus
nTPM: 27.0
2083 Male, age 80, both hemispheres 33.9
2358 Male, age 61, both hemispheres 27.2
1936 Male, age 76, left hemisphere 27.1
2326 Male, age 74, both hemispheres 20.0
Dorsolateral tegmental area
nTPM: 20.5
2654 Male, age 80, both hemispheres 32.5
2141 Male, age 76, both hemispheres 24.9
2751 Female, age 85, both hemispheres 18.0
2360 Male, age 74, both hemispheres 14.9
2337 Male, age 61, both hemispheres 12.0
Gigantocellular reticular nuclei, medullary
nTPM: 45.2
2462 Male, age 74, both hemispheres 73.4
2310 Male, age 80, both hemispheres 50.9
2022 Male, age 76, right hemisphere 50.2
2387 Female, age 91, both hemispheres 37.1
2314 Male, age 61, both hemispheres 30.6
1876 Female, age 85, both hemispheres 28.8
Gigantocellular reticular nuclei, pars
nTPM: 47.7
2168 Male, age 76, both hemispheres 66.3
2336 Male, age 61, both hemispheres 53.1
2330 Male, age 80, both hemispheres 44.5
2706 Male, age 80, both hemispheres 43.3
2084 Female, age 85, both hemispheres 31.5
Inferior olive
nTPM: 28.2
2085 Female, age 85, both hemispheres 47.1
2628 Female, age 91, both hemispheres 34.4
2178 Male, age 61, both hemispheres 24.3
2379 Male, age 80, both hemispheres 20.9
2563 Male, age 74, both hemispheres 14.2
Kolliker-Fuse nucleus
nTPM: 31.2
2793 Female, age 91, left hemisphere 44.4
2163 Male, age 80, both hemispheres 34.2
2315 Male, age 76, right hemisphere 15.1
Lateral lemniscal nuclei
nTPM: 60.6
2169 Male, age 76, both hemispheres 68.9
2453 Male, age 74, right hemisphere 67.8
2036 Male, age 80, both hemispheres 60.2
2320 Female, age 91, left hemisphere 55.6
2746 Female, age 85, left hemisphere 50.7
Lateral medullary reticular nucleus
nTPM: 29.6
2374 Male, age 61, both hemispheres 43.5
2804 Female, age 91, both hemispheres 43.0
2190 Female, age 85, both hemispheres 33.3
2044 Male, age 76, both hemispheres 32.7
2852 Male, age 80, both hemispheres 14.2
2305 Male, age 74, both hemispheres 10.8
Lateral parabrachial nucleus
nTPM: 34.4
2139 Female, age 85, right hemisphere 62.1
2013 Male, age 80, both hemispheres 34.9
2790 Male, age 61, both hemispheres 31.2
2792 Male, age 76, both hemispheres 9.5
Lateral vestibular nucleus
nTPM: 31.7
2184 Male, age 76, both hemispheres 35.7
2311 Male, age 80, both hemispheres 27.6
Locus coeruleus
nTPM: 25.0
2123 Female, age 91, both hemispheres 39.4
2162 Male, age 80, both hemispheres 29.7
2720 Male, age 74, both hemispheres 26.0
1980 Male, age 76, both hemispheres 23.6
2317 Female, age 72, unknown 22.6
2014 Male, age 55, unknown 18.4
2788 Male, age 74, unknown 14.9
Medial olivary nucleus
nTPM: 10.6
2851 Male, age 80, both hemispheres 19.6
2138 Female, age 91, both hemispheres 13.0
1962 Male, age 76, both hemispheres 7.2
1943 Male, age 61, both hemispheres 2.5
Medial parabrachial nucleus
nTPM: 35.6
2854 Male, age 80, both hemispheres 43.5
2156 Male, age 61, both hemispheres 41.9
2786 Male, age 76, both hemispheres 35.5
2463 Female, age 85, right hemisphere 32.2
2170 Female, age 91, both hemispheres 24.7
Medial periolivary nuclei
nTPM: 51.0
2171 Female, age 85, both hemispheres 75.5
2063 Male, age 76, both hemispheres 58.2
2458 Female, age 91, both hemispheres 47.0
2791 Male, age 74, right hemisphere 42.0
2081 Male, age 80, both hemispheres 32.6
Medial vestibular nucleus
nTPM: 34.9
2093 Male, age 80, both hemispheres 48.3
2803 Female, age 91, both hemispheres 40.1
2624 Male, age 61, both hemispheres 34.9
2743 Female, age 85, both hemispheres 34.1
2134 Male, age 76, both hemispheres 26.8
2801 Male, age 74, both hemispheres 25.4
Motor facial nucleus
nTPM: 56.6
2327 Male, age 80, both hemispheres 78.1
2062 Male, age 76, both hemispheres 68.1
2795 Female, age 91, both hemispheres 58.8
2365 Male, age 74, right hemisphere 50.3
2697 Female, age 85, both hemispheres 49.0
2126 Male, age 61, both hemispheres 35.2
Motor hypoglossal nucleus
nTPM: 30.3
2125 Female, age 91, both hemispheres 38.0
2132 Female, age 85, both hemispheres 35.3
2461 Male, age 61, both hemispheres 30.7
2182 Male, age 80, both hemispheres 24.1
2277 Male, age 76, both hemispheres 23.4
Motor trigeminal nucleus
nTPM: 45.3
2079 Male, age 80, both hemispheres 61.3
2560 Male, age 74, both hemispheres 52.1
2335 Male, age 61, both hemispheres 42.9
2321 Female, age 91, both hemispheres 37.1
2309 Male, age 76, both hemispheres 33.3
Nuclei of the trapezoid body
nTPM: 67.2
2159 Male, age 61, both hemispheres 85.0
2735 Female, age 85, both hemispheres 77.2
2368 Female, age 91, both hemispheres 64.0
1983 Male, age 76, both hemispheres 57.1
2166 Male, age 80, both hemispheres 52.7
Nucleus ambiguus
nTPM: 34.0
2096 Female, age 85, both hemispheres 54.5
2071 Male, age 76, both hemispheres 13.5
Nucleus cuneatus
nTPM: 35.1
2131 Male, age 76, both hemispheres 60.3
2100 Male, age 76, both hemispheres 58.6
2564 Male, age 74, both hemispheres 43.0
2562 Male, age 61, both hemispheres 35.1
2381 Male, age 80, both hemispheres 32.5
2376 Male, age 61, both hemispheres 27.3
2805 Female, age 91, both hemispheres 26.0
2808 Female, age 85, both hemispheres 21.0
2380 Male, age 80, both hemispheres 11.7
Nucleus gracilis
nTPM: 16.4
2299 Female, age 85, both hemispheres 18.7
2627 Male, age 74, both hemispheres 16.8
2382 Male, age 80, both hemispheres 13.7
Nucleus raphe magnus
nTPM: 66.1
2172 Female, age 85, both hemispheres 82.8
2160 Male, age 61, both hemispheres 80.7
2455 Male, age 74, both hemispheres 66.8
2328 Male, age 80, both hemispheres 65.1
2459 Female, age 91, both hemispheres 58.1
2051 Male, age 76, both hemispheres 42.7
Nucleus raphe obscurus
nTPM: 26.6
2800 Male, age 61, midline 49.1
2845 Female, age 85, midline 28.4
2142 Male, age 76, midline 2.1
Nucleus raphe pallidus
nTPM: 14.0
2183 Male, age 80, midline 23.3
1924 Male, age 61, midline 12.7
2145 Male, age 76, midline 6.0
Nucleus tractus solitarii
nTPM: 23.7
2307 Male, age 80, both hemispheres 26.1
2656 Male, age 76, both hemispheres 25.4
2144 Female, age 91, right hemisphere 24.4
2191 Female, age 85, both hemispheres 18.8
Paramedian reticular nucleus
nTPM: 35.4
2050 Female, age 85, both hemispheres 48.9
2313 Male, age 61, both hemispheres 38.6
2057 Male, age 80, both hemispheres 35.4
2052 Male, age 76, both hemispheres 18.8
Parvicellular reticular nuclei
nTPM: 43.6
2558 Male, age 74, both hemispheres 75.0
2095 Male, age 76, both hemispheres 30.6
2119 Male, age 80, both hemispheres 25.1
Parvicellular reticular nuclei, medullary
nTPM: 36.3
2181 Male, age 80, left hemisphere 37.7
2189 Female, age 91, both hemispheres 35.9
2091 Female, age 85, both hemispheres 35.3
Pedunculopontine tegmental nucleus
nTPM: 29.3
1921 Female, age 85, both hemispheres 32.6
2334 Male, age 80, both hemispheres 28.3
2338 Male, age 61, both hemispheres 26.8
Peritrigeminal nucleus
nTPM: 30.1
2179 Male, age 61, both hemispheres 36.2
2067 Female, age 85, both hemispheres 30.0
2136 Male, age 76, both hemispheres 24.1
Pontine nuclei
nTPM: 57.6
2787 Female, age 85, both hemispheres 90.3
1863 Male, age 55, unknown 71.0
2727 Male, age 61, right hemisphere 65.3
1968 Male, age 76, left hemisphere 59.8
2109 Female, age 72, unknown 59.3
2115 Male, age 80, left hemisphere 44.4
2454 Male, age 74, left hemisphere 40.7
2319 Female, age 91, both hemispheres 30.0
Pontine raphe nucleus
nTPM: 37.9
2122 Female, age 85, midline 55.6
2853 Male, age 76, midline 20.2
Posteroventral cochlear nucleus
nTPM: 27.4
2752 Female, age 85, both hemispheres 45.2
2371 Male, age 61, both hemispheres 33.8
2070 Male, age 76, both hemispheres 28.7
2341 Male, age 80, both hemispheres 26.6
2135 Female, age 91, both hemispheres 2.5
Prepositus hypoglossal nucleus
nTPM: 29.9
2086 Male, age 80, both hemispheres 32.2
2855 Female, age 85, right hemisphere 27.6
Principal sensory trigeminal nucleus
nTPM: 53.7
2158 Male, age 61, both hemispheres 80.6
2008 Male, age 80, left hemisphere 65.4
2367 Female, age 91, left hemisphere 41.7
2324 Male, age 76, both hemispheres 27.2
Reticular pontine nucleus, caudal
nTPM: 47.9
2332 Male, age 80, right hemisphere 81.5
2457 Female, age 91, both hemispheres 47.2
2092 Male, age 76, both hemispheres 40.7
2559 Male, age 74, both hemispheres 22.2
Reticular pontine nucleus, oral
nTPM: 33.9
2361 Male, age 74, both hemispheres 44.6
2012 Female, age 85, both hemispheres 43.4
2366 Female, age 91, both hemispheres 36.9
2167 Male, age 76, both hemispheres 23.7
1939 Male, age 80, both hemispheres 20.7
Reticulotegmental nucleus
nTPM: 38.4
2325 Male, age 76, both hemispheres 41.2
2333 Male, age 80, both hemispheres 39.8
2452 Male, age 74, both hemispheres 36.6
2322 Female, age 91, both hemispheres 36.1
Spinal trigeminal nucleus, caudal
nTPM: 37.9
2447 Male, age 76, both hemispheres 50.9
2308 Male, age 80, both hemispheres 37.6
2642 Male, age 74, both hemispheres 35.8
2390 Female, age 91, both hemispheres 34.4
2312 Male, age 61, both hemispheres 30.9
Spinal trigeminal nucleus, interpolar
nTPM: 40.9
2389 Female, age 91, both hemispheres 51.4
2386 Female, age 85, both hemispheres 41.9
2625 Male, age 61, both hemispheres 39.5
2066 Male, age 76, right hemisphere 38.3
2033 Male, age 80, both hemispheres 33.2
Spinal trigeminal nucleus, oral
nTPM: 36.0
2737 Female, age 85, both hemispheres 40.9
2164 Male, age 80, both hemispheres 39.9
1978 Male, age 76, both hemispheres 27.3
Spinal vestibular nucleus
nTPM: 35.9
2186 Female, age 91, both hemispheres 44.8
2796 Male, age 61, both hemispheres 43.8
2780 Male, age 80, both hemispheres 39.6
2806 Female, age 85, both hemispheres 32.2
2748 Male, age 76, both hemispheres 30.5
2384 Male, age 74, both hemispheres 24.5
Subcoeruleus area
nTPM: 43.2
2323 Female, age 91, left hemisphere 69.5
2089 Male, age 76, left hemisphere 55.5
1958 Male, age 80, both hemispheres 46.7
2451 Male, age 74, both hemispheres 27.9
2369 Female, age 85, left hemisphere 16.5
Superior olive
nTPM: 52.6
1875 Female, age 85, both hemispheres 65.5
2561 Female, age 91, both hemispheres 60.0
2329 Male, age 80, right hemisphere 57.4
2020 Male, age 76, both hemispheres 40.9
2364 Male, age 74, right hemisphere 39.2
Superior vestibular nucleus
nTPM: 19.9
2015 Male, age 80, both hemispheres 25.5
2061 Male, age 76, both hemispheres 23.1
2383 Male, age 74, both hemispheres 11.1
Ventral medullary reticular nucleus
nTPM: 36.6
2372 Male, age 61, both hemispheres 40.0
2060 Male, age 76, both hemispheres 33.2
Ventral periolivary nuclei
nTPM: 60.4
2130 Female, age 85, both hemispheres 72.9
2794 Female, age 91, left hemisphere 68.5
2165 Male, age 80, both hemispheres 67.4
2023 Male, age 76, both hemispheres 32.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 35.2
2302 Female, age 91, both hemispheres 43.2
2180 Male, age 61, both hemispheres 38.8
2741 Female, age 85, both hemispheres 38.1
1986 Male, age 76, both hemispheres 29.0
2118 Male, age 80, both hemispheres 26.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 44.3
2449 Male, age 74, both hemispheres 62.0
2161 Male, age 80, both hemispheres 50.8
1959 Male, age 76, both hemispheres 46.1
2456 Female, age 91, both hemispheres 44.7
2840 Female, age 85, both hemispheres 41.6
2359 Male, age 61, both hemispheres 20.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 40.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 12.8
FF:10182-103D2 60 years, female 19.5
FF:10165-103B3 76 years, female 6.1
Medulla oblongata
Scaled Tags Per Million: 10.8
FF:10038-101F2 18-64 years, mixed 16.8
FF:10155-103A2 76 years, female 10.8
FF:10174-103C3 60 years, female 5.0
Pons
Scaled Tags Per Million: 40.1
FF:10033-101E6 18-54 years, mixed 40.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 20.6
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 20.6
Samples: 4

Max nTPM: 28.7
Min nTPM: 9.0
Sample A Female 28.7
Sample B Female 24.1
Sample C Male 20.6
Sample D Male 9.0
Pons
nTPM: 18.6
Samples: 4

Max nTPM: 30.0
Min nTPM: 14.0
Sample A Female 15.8
Sample B Female 14.4
Sample C Male 14.0
Sample D Male 30.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 39.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 39.5
Samples: 4

Max nTPM: 42.7
Min nTPM: 36.1
Sample A Male 40.7
Sample B Male 42.7
Sample C Female 36.1
Sample D Female 38.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.8
69236610 Antisense, RP_050329_04_A08, Mouse strain C57BL/6J (56 days, male) 8.7
70560276 Antisense, RP_050329_04_A08, Mouse strain C57BL/6J (56 days, male) 6.8
77924344 Antisense, RP_070219_01_F10, Mouse strain C57BL/6J (56 days, male) 4.9
Pons
Expression energy: 5.9
69236610 Antisense, RP_050329_04_A08, Mouse strain C57BL/6J (56 days, male) 7.6
70560276 Antisense, RP_050329_04_A08, Mouse strain C57BL/6J (56 days, male) 6.1
77924344 Antisense, RP_070219_01_F10, Mouse strain C57BL/6J (56 days, male) 4.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org