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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:67.8 nTPM
FANTOM5:176.1 Scaled Tags Per Million
Pig:128.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody CAB010203
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

67.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 67.8
Samples: 246

Max nTPM: 118.7
Min nTPM: 33.1
Std nTPM: 16.8
Median nTPM: 66.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 118.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 110.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 108.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 108.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 107.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 105.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 104.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 102.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 101.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 100.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 98.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 98.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 98.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 96.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 95.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 95.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 95.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 95.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 95.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 95.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 94.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 94.6
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 93.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 92.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 92.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 92.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 91.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 90.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 90.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 89.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 89.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 88.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 88.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 87.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 86.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 86.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 86.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 86.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 86.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 85.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 85.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 84.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 84.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 84.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 83.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 83.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 82.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 81.9
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 81.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 81.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 81.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 80.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 80.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 79.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 79.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 79.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 79.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 79.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 78.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 78.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 78.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 78.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 78.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 78.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 77.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 77.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 77.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 77.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 77.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 76.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 76.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 76.8
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 76.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 76.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 75.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 75.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 74.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 74.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 74.4
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 74.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 74.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 73.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 73.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 73.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 73.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 73.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 73.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 73.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 72.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 72.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 71.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 71.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 70.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 70.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 70.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 70.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 69.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 69.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 69.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 68.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 68.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 68.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 68.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 68.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 68.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 68.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 67.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 67.9
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 67.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 67.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 67.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 67.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 67.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 67.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 66.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 66.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 66.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 66.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 66.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 66.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 65.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 65.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 65.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 65.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 64.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 64.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 64.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 64.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 63.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 63.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 63.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 63.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 63.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 63.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 63.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 62.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 62.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 62.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 62.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 62.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 62.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 61.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 61.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 61.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 61.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 61.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 61.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 60.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 60.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 60.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 60.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 59.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 59.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 59.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 59.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 59.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 59.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 59.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 59.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 59.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 58.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 58.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 58.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 58.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 58.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 58.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 58.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 57.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 57.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 57.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 56.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 56.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 56.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 56.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 56.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 55.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 55.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 54.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 54.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 54.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 54.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 54.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 54.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 53.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 53.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 53.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 53.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 53.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 53.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 53.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 53.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 52.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 52.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 52.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 52.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 51.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 51.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 51.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 51.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 50.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 50.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 50.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 50.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 50.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 50.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 49.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 49.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 48.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 48.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 47.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 47.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 47.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 46.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 46.7
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 46.4
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 46.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 46.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 45.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 45.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 44.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 43.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 43.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 43.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 42.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 42.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 41.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 41.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 41.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 40.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 40.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 40.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 40.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 39.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 39.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 37.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 37.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 35.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 33.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

176.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 176.1
FF:10164-103B2 76 years, female 176.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

128.6
Pig sample Sample description nTPM
Caudate
nTPM: 128.6
Samples: 4

Max nTPM: 141.1
Min nTPM: 117.1
Sample A Female 117.1
Sample B Female 130.4
Sample C Male 141.1
Sample D Male 125.8

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