PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:149.2 nTPM
FANTOM5:318.7 Scaled Tags Per Million
Pig:143.0 nTPM
Mouse:73.4 nTPM
Allen mouse:3.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 149.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 120.8
2301 Female, age 85, both hemispheres 152.5
1984 Male, age 76, both hemispheres 113.3
2090 Male, age 80, both hemispheres 110.0
2188 Female, age 91, both hemispheres 107.4
Area postrema
nTPM: 136.3
2799 Male, age 61, both hemispheres 172.9
2306 Male, age 80, both hemispheres 128.9
2054 Male, age 76, both hemispheres 107.1
Dorsal cochlear nucleus
nTPM: 121.2
2802 Male, age 74, right hemisphere 142.7
2378 Male, age 80, both hemispheres 123.9
2370 Male, age 61, both hemispheres 115.2
2187 Female, age 91, both hemispheres 113.2
2058 Male, age 76, both hemispheres 111.2
Dorsal medullary reticular nucleus
nTPM: 114.2
2373 Male, age 61, both hemispheres 119.4
2040 Female, age 85, both hemispheres 113.7
2088 Male, age 76, both hemispheres 109.7
Dorsal motor vagal complex
nTPM: 117.9
2797 Male, age 61, both hemispheres 147.4
2185 Male, age 76, both hemispheres 142.8
2643 Male, age 74, both hemispheres 121.6
2844 Male, age 55, unknown 117.8
2000 Male, age 74, unknown 112.7
2133 Female, age 91, both hemispheres 110.5
2807 Female, age 85, both hemispheres 95.6
2813 Female, age 72, unknown 94.7
Dorsal tegmental nucleus
nTPM: 106.9
2083 Male, age 80, both hemispheres 114.4
2326 Male, age 74, both hemispheres 112.0
1936 Male, age 76, left hemisphere 102.3
2358 Male, age 61, both hemispheres 99.0
Dorsolateral tegmental area
nTPM: 105.6
2654 Male, age 80, both hemispheres 114.4
2751 Female, age 85, both hemispheres 110.2
2141 Male, age 76, both hemispheres 106.1
2337 Male, age 61, both hemispheres 104.1
2360 Male, age 74, both hemispheres 93.4
Gigantocellular reticular nuclei, medullary
nTPM: 125.0
2387 Female, age 91, both hemispheres 142.7
2314 Male, age 61, both hemispheres 138.2
2462 Male, age 74, both hemispheres 134.3
2310 Male, age 80, both hemispheres 123.9
2022 Male, age 76, right hemisphere 107.8
1876 Female, age 85, both hemispheres 102.8
Gigantocellular reticular nuclei, pars
nTPM: 124.4
2330 Male, age 80, both hemispheres 136.4
2168 Male, age 76, both hemispheres 133.4
2706 Male, age 80, both hemispheres 129.6
2336 Male, age 61, both hemispheres 115.6
2084 Female, age 85, both hemispheres 107.1
Inferior olive
nTPM: 149.2
2563 Male, age 74, both hemispheres 156.2
2628 Female, age 91, both hemispheres 155.3
2085 Female, age 85, both hemispheres 152.4
2379 Male, age 80, both hemispheres 152.1
2178 Male, age 61, both hemispheres 129.9
Kolliker-Fuse nucleus
nTPM: 122.0
2163 Male, age 80, both hemispheres 125.5
2315 Male, age 76, right hemisphere 121.4
2793 Female, age 91, left hemisphere 119.0
Lateral lemniscal nuclei
nTPM: 131.0
2036 Male, age 80, both hemispheres 146.0
2453 Male, age 74, right hemisphere 140.3
2169 Male, age 76, both hemispheres 134.8
2320 Female, age 91, left hemisphere 125.3
2746 Female, age 85, left hemisphere 108.6
Lateral medullary reticular nucleus
nTPM: 129.6
2804 Female, age 91, both hemispheres 152.9
2374 Male, age 61, both hemispheres 130.7
2305 Male, age 74, both hemispheres 127.2
2044 Male, age 76, both hemispheres 126.1
2852 Male, age 80, both hemispheres 123.0
2190 Female, age 85, both hemispheres 117.7
Lateral parabrachial nucleus
nTPM: 122.7
2790 Male, age 61, both hemispheres 133.7
2139 Female, age 85, right hemisphere 127.8
2792 Male, age 76, both hemispheres 118.2
2013 Male, age 80, both hemispheres 111.0
Lateral vestibular nucleus
nTPM: 128.4
2184 Male, age 76, both hemispheres 135.0
2311 Male, age 80, both hemispheres 121.9
Locus coeruleus
nTPM: 104.5
2317 Female, age 72, unknown 119.2
2014 Male, age 55, unknown 108.9
2162 Male, age 80, both hemispheres 106.3
2123 Female, age 91, both hemispheres 102.9
2788 Male, age 74, unknown 101.9
2720 Male, age 74, both hemispheres 100.4
1980 Male, age 76, both hemispheres 91.9
Medial olivary nucleus
nTPM: 121.3
2138 Female, age 91, both hemispheres 139.0
1962 Male, age 76, both hemispheres 124.3
2851 Male, age 80, both hemispheres 120.8
1943 Male, age 61, both hemispheres 101.3
Medial parabrachial nucleus
nTPM: 114.1
2156 Male, age 61, both hemispheres 123.8
2854 Male, age 80, both hemispheres 119.8
2170 Female, age 91, both hemispheres 114.5
2786 Male, age 76, both hemispheres 108.5
2463 Female, age 85, right hemisphere 104.0
Medial periolivary nuclei
nTPM: 130.4
2171 Female, age 85, both hemispheres 149.9
2063 Male, age 76, both hemispheres 139.7
2791 Male, age 74, right hemisphere 134.0
2458 Female, age 91, both hemispheres 121.2
2081 Male, age 80, both hemispheres 107.2
Medial vestibular nucleus
nTPM: 126.5
2624 Male, age 61, both hemispheres 144.3
2801 Male, age 74, both hemispheres 135.7
2093 Male, age 80, both hemispheres 132.1
2803 Female, age 91, both hemispheres 122.1
2134 Male, age 76, both hemispheres 117.6
2743 Female, age 85, both hemispheres 107.3
Motor facial nucleus
nTPM: 136.9
2795 Female, age 91, both hemispheres 177.6
2062 Male, age 76, both hemispheres 140.5
2327 Male, age 80, both hemispheres 137.6
2365 Male, age 74, right hemisphere 136.2
2697 Female, age 85, both hemispheres 116.8
2126 Male, age 61, both hemispheres 112.7
Motor hypoglossal nucleus
nTPM: 111.3
2182 Male, age 80, both hemispheres 126.7
2125 Female, age 91, both hemispheres 125.2
2461 Male, age 61, both hemispheres 113.6
2132 Female, age 85, both hemispheres 111.2
2277 Male, age 76, both hemispheres 80.0
Motor trigeminal nucleus
nTPM: 111.3
2560 Male, age 74, both hemispheres 122.6
2321 Female, age 91, both hemispheres 116.0
2079 Male, age 80, both hemispheres 114.3
2309 Male, age 76, both hemispheres 105.5
2335 Male, age 61, both hemispheres 98.0
Nuclei of the trapezoid body
nTPM: 133.5
2368 Female, age 91, both hemispheres 151.1
2735 Female, age 85, both hemispheres 138.4
1983 Male, age 76, both hemispheres 134.4
2159 Male, age 61, both hemispheres 122.7
2166 Male, age 80, both hemispheres 120.6
Nucleus ambiguus
nTPM: 106.6
2071 Male, age 76, both hemispheres 128.4
2096 Female, age 85, both hemispheres 84.7
Nucleus cuneatus
nTPM: 138.5
2564 Male, age 74, both hemispheres 169.4
2100 Male, age 76, both hemispheres 155.2
2805 Female, age 91, both hemispheres 144.9
2131 Male, age 76, both hemispheres 144.7
2380 Male, age 80, both hemispheres 135.8
2381 Male, age 80, both hemispheres 133.7
2808 Female, age 85, both hemispheres 125.2
2562 Male, age 61, both hemispheres 120.8
2376 Male, age 61, both hemispheres 117.2
Nucleus gracilis
nTPM: 135.6
2627 Male, age 74, both hemispheres 148.5
2299 Female, age 85, both hemispheres 131.4
2382 Male, age 80, both hemispheres 126.9
Nucleus raphe magnus
nTPM: 131.8
2172 Female, age 85, both hemispheres 140.1
2051 Male, age 76, both hemispheres 139.0
2328 Male, age 80, both hemispheres 135.7
2455 Male, age 74, both hemispheres 134.5
2160 Male, age 61, both hemispheres 122.0
2459 Female, age 91, both hemispheres 119.7
Nucleus raphe obscurus
nTPM: 123.3
2845 Female, age 85, midline 133.2
2800 Male, age 61, midline 121.7
2142 Male, age 76, midline 114.8
Nucleus raphe pallidus
nTPM: 122.4
2145 Male, age 76, midline 129.3
1924 Male, age 61, midline 123.1
2183 Male, age 80, midline 114.8
Nucleus tractus solitarii
nTPM: 100.2
2144 Female, age 91, right hemisphere 115.0
2191 Female, age 85, both hemispheres 98.7
2656 Male, age 76, both hemispheres 95.9
2307 Male, age 80, both hemispheres 91.2
Paramedian reticular nucleus
nTPM: 110.5
2050 Female, age 85, both hemispheres 125.6
2057 Male, age 80, both hemispheres 110.9
2052 Male, age 76, both hemispheres 103.8
2313 Male, age 61, both hemispheres 101.8
Parvicellular reticular nuclei
nTPM: 120.8
2558 Male, age 74, both hemispheres 129.1
2095 Male, age 76, both hemispheres 119.8
2119 Male, age 80, both hemispheres 113.3
Parvicellular reticular nuclei, medullary
nTPM: 115.9
2091 Female, age 85, both hemispheres 121.3
2181 Male, age 80, left hemisphere 117.9
2189 Female, age 91, both hemispheres 108.4
Pedunculopontine tegmental nucleus
nTPM: 110.3
2338 Male, age 61, both hemispheres 112.8
2334 Male, age 80, both hemispheres 110.8
1921 Female, age 85, both hemispheres 107.2
Peritrigeminal nucleus
nTPM: 123.2
2136 Male, age 76, both hemispheres 131.9
2067 Female, age 85, both hemispheres 119.9
2179 Male, age 61, both hemispheres 117.9
Pontine nuclei
nTPM: 122.4
1863 Male, age 55, unknown 146.0
1968 Male, age 76, left hemisphere 132.9
2109 Female, age 72, unknown 132.9
2787 Female, age 85, both hemispheres 130.7
2454 Male, age 74, left hemisphere 111.5
2319 Female, age 91, both hemispheres 110.5
2115 Male, age 80, left hemisphere 108.4
2727 Male, age 61, right hemisphere 105.9
Pontine raphe nucleus
nTPM: 108.1
2122 Female, age 85, midline 113.9
2853 Male, age 76, midline 102.3
Posteroventral cochlear nucleus
nTPM: 106.9
2341 Male, age 80, both hemispheres 114.5
2371 Male, age 61, both hemispheres 111.5
2752 Female, age 85, both hemispheres 108.9
2070 Male, age 76, both hemispheres 108.7
2135 Female, age 91, both hemispheres 90.7
Prepositus hypoglossal nucleus
nTPM: 123.7
2855 Female, age 85, right hemisphere 134.1
2086 Male, age 80, both hemispheres 113.3
Principal sensory trigeminal nucleus
nTPM: 120.2
2324 Male, age 76, both hemispheres 143.1
2158 Male, age 61, both hemispheres 113.1
2008 Male, age 80, left hemisphere 112.6
2367 Female, age 91, left hemisphere 111.9
Reticular pontine nucleus, caudal
nTPM: 127.0
2332 Male, age 80, right hemisphere 142.0
2457 Female, age 91, both hemispheres 128.1
2092 Male, age 76, both hemispheres 127.7
2559 Male, age 74, both hemispheres 110.1
Reticular pontine nucleus, oral
nTPM: 112.3
2012 Female, age 85, both hemispheres 116.3
2361 Male, age 74, both hemispheres 115.4
1939 Male, age 80, both hemispheres 112.0
2167 Male, age 76, both hemispheres 109.3
2366 Female, age 91, both hemispheres 108.2
Reticulotegmental nucleus
nTPM: 126.2
2333 Male, age 80, both hemispheres 135.4
2322 Female, age 91, both hemispheres 132.9
2452 Male, age 74, both hemispheres 118.7
2325 Male, age 76, both hemispheres 117.7
Spinal trigeminal nucleus, caudal
nTPM: 126.6
2390 Female, age 91, both hemispheres 147.1
2447 Male, age 76, both hemispheres 135.2
2308 Male, age 80, both hemispheres 122.5
2312 Male, age 61, both hemispheres 118.4
2642 Male, age 74, both hemispheres 109.8
Spinal trigeminal nucleus, interpolar
nTPM: 125.5
2625 Male, age 61, both hemispheres 154.0
2389 Female, age 91, both hemispheres 132.1
2066 Male, age 76, right hemisphere 123.8
2033 Male, age 80, both hemispheres 110.8
2386 Female, age 85, both hemispheres 106.7
Spinal trigeminal nucleus, oral
nTPM: 111.5
2164 Male, age 80, both hemispheres 128.5
2737 Female, age 85, both hemispheres 106.1
1978 Male, age 76, both hemispheres 100.0
Spinal vestibular nucleus
nTPM: 115.6
2806 Female, age 85, both hemispheres 122.8
2748 Male, age 76, both hemispheres 118.7
2384 Male, age 74, both hemispheres 118.3
2186 Female, age 91, both hemispheres 116.9
2780 Male, age 80, both hemispheres 108.7
2796 Male, age 61, both hemispheres 108.4
Subcoeruleus area
nTPM: 109.4
2089 Male, age 76, left hemisphere 120.2
2369 Female, age 85, left hemisphere 111.7
1958 Male, age 80, both hemispheres 108.6
2451 Male, age 74, both hemispheres 107.4
2323 Female, age 91, left hemisphere 99.1
Superior olive
nTPM: 125.4
2329 Male, age 80, right hemisphere 136.4
2561 Female, age 91, both hemispheres 128.1
2020 Male, age 76, both hemispheres 123.2
2364 Male, age 74, right hemisphere 120.3
1875 Female, age 85, both hemispheres 118.8
Superior vestibular nucleus
nTPM: 107.6
2015 Male, age 80, both hemispheres 114.3
2061 Male, age 76, both hemispheres 108.8
2383 Male, age 74, both hemispheres 99.7
Ventral medullary reticular nucleus
nTPM: 118.7
2372 Male, age 61, both hemispheres 129.6
2060 Male, age 76, both hemispheres 107.8
Ventral periolivary nuclei
nTPM: 132.7
2130 Female, age 85, both hemispheres 145.4
2165 Male, age 80, both hemispheres 139.4
2023 Male, age 76, both hemispheres 126.2
2794 Female, age 91, left hemisphere 119.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 124.5
2302 Female, age 91, both hemispheres 152.9
1986 Male, age 76, both hemispheres 125.5
2180 Male, age 61, both hemispheres 116.7
2118 Male, age 80, both hemispheres 114.4
2741 Female, age 85, both hemispheres 113.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 123.0
2456 Female, age 91, both hemispheres 129.1
2161 Male, age 80, both hemispheres 128.8
1959 Male, age 76, both hemispheres 126.4
2449 Male, age 74, both hemispheres 125.1
2840 Female, age 85, both hemispheres 120.2
2359 Male, age 61, both hemispheres 108.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 318.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 296.9
FF:10182-103D2 60 years, female 366.8
FF:10165-103B3 76 years, female 227.0
Medulla oblongata
Scaled Tags Per Million: 227.8
FF:10038-101F2 18-64 years, mixed 300.5
FF:10155-103A2 76 years, female 211.9
FF:10174-103C3 60 years, female 170.9
Pons
Scaled Tags Per Million: 318.7
FF:10033-101E6 18-54 years, mixed 318.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 143.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 143.0
Samples: 4

Max nTPM: 158.5
Min nTPM: 130.3
Sample A Female 130.3
Sample B Female 137.4
Sample C Male 158.5
Sample D Male 145.8
Pons
nTPM: 117.6
Samples: 4

Max nTPM: 144.4
Min nTPM: 98.5
Sample A Female 126.4
Sample B Female 100.9
Sample C Male 98.5
Sample D Male 144.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 73.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 73.4
Samples: 4

Max nTPM: 76.0
Min nTPM: 69.6
Sample A Male 76.0
Sample B Male 72.3
Sample C Female 69.6
Sample D Female 75.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.3
69527980 Antisense, RP_050421_02_H03, Mouse strain C57BL/6J (56 days, male) 3.3
Pons
Expression energy: 3.1
69527980 Antisense, RP_050421_02_H03, Mouse strain C57BL/6J (56 days, male) 3.1

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