PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:614.0 nTPM
FANTOM5:384.6 Scaled Tags Per Million
Pig:112.0 nTPM
Mouse:23.3 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 614.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 411.2
2188 Female, age 91, both hemispheres 513.0
2301 Female, age 85, both hemispheres 467.6
2090 Male, age 80, both hemispheres 418.6
1984 Male, age 76, both hemispheres 245.4
Area postrema
nTPM: 587.0
2799 Male, age 61, both hemispheres 747.3
2306 Male, age 80, both hemispheres 605.5
2054 Male, age 76, both hemispheres 408.3
Dorsal cochlear nucleus
nTPM: 430.2
2378 Male, age 80, both hemispheres 469.9
2370 Male, age 61, both hemispheres 450.0
2802 Male, age 74, right hemisphere 442.9
2058 Male, age 76, both hemispheres 402.9
2187 Female, age 91, both hemispheres 385.3
Dorsal medullary reticular nucleus
nTPM: 467.6
2373 Male, age 61, both hemispheres 558.9
2088 Male, age 76, both hemispheres 458.9
2040 Female, age 85, both hemispheres 384.9
Dorsal motor vagal complex
nTPM: 558.0
2797 Male, age 61, both hemispheres 1091.0
2643 Male, age 74, both hemispheres 639.9
2807 Female, age 85, both hemispheres 617.8
2185 Male, age 76, both hemispheres 532.7
2813 Female, age 72, unknown 453.0
2844 Male, age 55, unknown 403.6
2000 Male, age 74, unknown 372.6
2133 Female, age 91, both hemispheres 353.3
Dorsal tegmental nucleus
nTPM: 429.2
2083 Male, age 80, both hemispheres 481.4
2358 Male, age 61, both hemispheres 463.7
2326 Male, age 74, both hemispheres 405.4
1936 Male, age 76, left hemisphere 366.4
Dorsolateral tegmental area
nTPM: 375.0
2337 Male, age 61, both hemispheres 478.6
2654 Male, age 80, both hemispheres 477.2
2751 Female, age 85, both hemispheres 331.8
2141 Male, age 76, both hemispheres 317.1
2360 Male, age 74, both hemispheres 270.4
Gigantocellular reticular nuclei, medullary
nTPM: 364.1
2314 Male, age 61, both hemispheres 491.6
2387 Female, age 91, both hemispheres 402.0
2310 Male, age 80, both hemispheres 387.8
2022 Male, age 76, right hemisphere 361.7
1876 Female, age 85, both hemispheres 327.4
2462 Male, age 74, both hemispheres 214.4
Gigantocellular reticular nuclei, pars
nTPM: 459.6
2330 Male, age 80, both hemispheres 536.3
2706 Male, age 80, both hemispheres 518.5
2336 Male, age 61, both hemispheres 516.8
2084 Female, age 85, both hemispheres 414.5
2168 Male, age 76, both hemispheres 312.1
Inferior olive
nTPM: 434.5
2628 Female, age 91, both hemispheres 558.7
2379 Male, age 80, both hemispheres 481.3
2178 Male, age 61, both hemispheres 428.1
2085 Female, age 85, both hemispheres 406.0
2563 Male, age 74, both hemispheres 298.2
Kolliker-Fuse nucleus
nTPM: 464.9
2793 Female, age 91, left hemisphere 624.4
2163 Male, age 80, both hemispheres 420.6
2315 Male, age 76, right hemisphere 349.8
Lateral lemniscal nuclei
nTPM: 340.3
2320 Female, age 91, left hemisphere 432.0
2169 Male, age 76, both hemispheres 342.6
2036 Male, age 80, both hemispheres 324.9
2746 Female, age 85, left hemisphere 316.2
2453 Male, age 74, right hemisphere 285.9
Lateral medullary reticular nucleus
nTPM: 423.0
2374 Male, age 61, both hemispheres 550.7
2852 Male, age 80, both hemispheres 513.6
2190 Female, age 85, both hemispheres 451.2
2804 Female, age 91, both hemispheres 380.4
2044 Male, age 76, both hemispheres 376.9
2305 Male, age 74, both hemispheres 265.4
Lateral parabrachial nucleus
nTPM: 476.7
2792 Male, age 76, both hemispheres 675.9
2013 Male, age 80, both hemispheres 439.9
2790 Male, age 61, both hemispheres 438.7
2139 Female, age 85, right hemisphere 352.3
Lateral vestibular nucleus
nTPM: 445.9
2311 Male, age 80, both hemispheres 471.4
2184 Male, age 76, both hemispheres 420.5
Locus coeruleus
nTPM: 299.4
2720 Male, age 74, both hemispheres 444.3
2162 Male, age 80, both hemispheres 399.4
2317 Female, age 72, unknown 299.7
2788 Male, age 74, unknown 244.1
2123 Female, age 91, both hemispheres 240.2
2014 Male, age 55, unknown 234.4
1980 Male, age 76, both hemispheres 233.9
Medial olivary nucleus
nTPM: 434.7
2851 Male, age 80, both hemispheres 533.1
2138 Female, age 91, both hemispheres 415.3
1943 Male, age 61, both hemispheres 414.5
1962 Male, age 76, both hemispheres 376.1
Medial parabrachial nucleus
nTPM: 408.8
2156 Male, age 61, both hemispheres 529.2
2786 Male, age 76, both hemispheres 441.0
2854 Male, age 80, both hemispheres 396.0
2463 Female, age 85, right hemisphere 341.9
2170 Female, age 91, both hemispheres 335.9
Medial periolivary nuclei
nTPM: 311.9
2081 Male, age 80, both hemispheres 403.2
2458 Female, age 91, both hemispheres 386.0
2063 Male, age 76, both hemispheres 290.9
2171 Female, age 85, both hemispheres 248.0
2791 Male, age 74, right hemisphere 231.4
Medial vestibular nucleus
nTPM: 363.9
2624 Male, age 61, both hemispheres 458.6
2803 Female, age 91, both hemispheres 453.2
2093 Male, age 80, both hemispheres 399.0
2801 Male, age 74, both hemispheres 313.2
2134 Male, age 76, both hemispheres 286.4
2743 Female, age 85, both hemispheres 272.6
Motor facial nucleus
nTPM: 376.5
2697 Female, age 85, both hemispheres 574.2
2795 Female, age 91, both hemispheres 394.9
2327 Male, age 80, both hemispheres 394.4
2126 Male, age 61, both hemispheres 372.0
2365 Male, age 74, right hemisphere 276.0
2062 Male, age 76, both hemispheres 247.5
Motor hypoglossal nucleus
nTPM: 457.8
2132 Female, age 85, both hemispheres 542.1
2182 Male, age 80, both hemispheres 536.9
2461 Male, age 61, both hemispheres 500.2
2125 Female, age 91, both hemispheres 366.6
2277 Male, age 76, both hemispheres 343.2
Motor trigeminal nucleus
nTPM: 408.2
2309 Male, age 76, both hemispheres 493.1
2335 Male, age 61, both hemispheres 466.3
2321 Female, age 91, both hemispheres 405.3
2079 Male, age 80, both hemispheres 364.2
2560 Male, age 74, both hemispheres 312.1
Nuclei of the trapezoid body
nTPM: 317.6
2166 Male, age 80, both hemispheres 444.5
2368 Female, age 91, both hemispheres 373.3
2159 Male, age 61, both hemispheres 307.4
1983 Male, age 76, both hemispheres 266.2
2735 Female, age 85, both hemispheres 196.8
Nucleus ambiguus
nTPM: 448.2
2071 Male, age 76, both hemispheres 473.9
2096 Female, age 85, both hemispheres 422.5
Nucleus cuneatus
nTPM: 510.9
2805 Female, age 91, both hemispheres 714.0
2380 Male, age 80, both hemispheres 563.5
2562 Male, age 61, both hemispheres 555.9
2381 Male, age 80, both hemispheres 553.9
2808 Female, age 85, both hemispheres 519.9
2100 Male, age 76, both hemispheres 467.1
2564 Male, age 74, both hemispheres 418.0
2376 Male, age 61, both hemispheres 411.2
2131 Male, age 76, both hemispheres 395.0
Nucleus gracilis
nTPM: 614.0
2382 Male, age 80, both hemispheres 720.7
2299 Female, age 85, both hemispheres 652.3
2627 Male, age 74, both hemispheres 469.1
Nucleus raphe magnus
nTPM: 320.5
2328 Male, age 80, both hemispheres 440.3
2051 Male, age 76, both hemispheres 421.9
2459 Female, age 91, both hemispheres 404.3
2455 Male, age 74, both hemispheres 238.5
2172 Female, age 85, both hemispheres 217.4
2160 Male, age 61, both hemispheres 200.8
Nucleus raphe obscurus
nTPM: 440.0
2142 Male, age 76, midline 473.5
2800 Male, age 61, midline 428.0
2845 Female, age 85, midline 418.5
Nucleus raphe pallidus
nTPM: 391.4
2145 Male, age 76, midline 498.7
2183 Male, age 80, midline 394.0
1924 Male, age 61, midline 281.4
Nucleus tractus solitarii
nTPM: 360.5
2307 Male, age 80, both hemispheres 465.0
2191 Female, age 85, both hemispheres 418.7
2656 Male, age 76, both hemispheres 340.2
2144 Female, age 91, right hemisphere 217.9
Paramedian reticular nucleus
nTPM: 357.8
2052 Male, age 76, both hemispheres 397.0
2313 Male, age 61, both hemispheres 386.0
2057 Male, age 80, both hemispheres 361.7
2050 Female, age 85, both hemispheres 286.6
Parvicellular reticular nuclei
nTPM: 362.4
2095 Male, age 76, both hemispheres 428.3
2119 Male, age 80, both hemispheres 363.6
2558 Male, age 74, both hemispheres 295.3
Parvicellular reticular nuclei, medullary
nTPM: 428.2
2181 Male, age 80, left hemisphere 493.1
2189 Female, age 91, both hemispheres 407.3
2091 Female, age 85, both hemispheres 384.0
Pedunculopontine tegmental nucleus
nTPM: 397.3
2334 Male, age 80, both hemispheres 443.4
2338 Male, age 61, both hemispheres 425.8
1921 Female, age 85, both hemispheres 322.6
Peritrigeminal nucleus
nTPM: 381.9
2136 Male, age 76, both hemispheres 411.0
2067 Female, age 85, both hemispheres 380.9
2179 Male, age 61, both hemispheres 353.7
Pontine nuclei
nTPM: 331.5
2115 Male, age 80, left hemisphere 485.5
1968 Male, age 76, left hemisphere 442.7
2319 Female, age 91, both hemispheres 425.9
1863 Male, age 55, unknown 321.4
2109 Female, age 72, unknown 283.2
2454 Male, age 74, left hemisphere 264.6
2787 Female, age 85, both hemispheres 259.4
2727 Male, age 61, right hemisphere 169.5
Pontine raphe nucleus
nTPM: 310.3
2853 Male, age 76, midline 336.1
2122 Female, age 85, midline 284.5
Posteroventral cochlear nucleus
nTPM: 471.6
2135 Female, age 91, both hemispheres 557.1
2341 Male, age 80, both hemispheres 529.8
2371 Male, age 61, both hemispheres 512.9
2070 Male, age 76, both hemispheres 406.7
2752 Female, age 85, both hemispheres 351.5
Prepositus hypoglossal nucleus
nTPM: 339.2
2086 Male, age 80, both hemispheres 344.3
2855 Female, age 85, right hemisphere 334.0
Principal sensory trigeminal nucleus
nTPM: 337.8
2324 Male, age 76, both hemispheres 449.8
2367 Female, age 91, left hemisphere 394.6
2158 Male, age 61, both hemispheres 268.7
2008 Male, age 80, left hemisphere 238.1
Reticular pontine nucleus, caudal
nTPM: 387.6
2457 Female, age 91, both hemispheres 426.4
2092 Male, age 76, both hemispheres 413.4
2559 Male, age 74, both hemispheres 362.2
2332 Male, age 80, right hemisphere 348.3
Reticular pontine nucleus, oral
nTPM: 379.4
2366 Female, age 91, both hemispheres 571.5
2167 Male, age 76, both hemispheres 442.6
1939 Male, age 80, both hemispheres 378.2
2012 Female, age 85, both hemispheres 295.2
2361 Male, age 74, both hemispheres 209.4
Reticulotegmental nucleus
nTPM: 413.4
2333 Male, age 80, both hemispheres 460.9
2452 Male, age 74, both hemispheres 437.2
2322 Female, age 91, both hemispheres 423.1
2325 Male, age 76, both hemispheres 332.2
Spinal trigeminal nucleus, caudal
nTPM: 435.2
2308 Male, age 80, both hemispheres 562.6
2642 Male, age 74, both hemispheres 458.8
2312 Male, age 61, both hemispheres 426.6
2390 Female, age 91, both hemispheres 381.8
2447 Male, age 76, both hemispheres 346.0
Spinal trigeminal nucleus, interpolar
nTPM: 377.6
2625 Male, age 61, both hemispheres 438.2
2389 Female, age 91, both hemispheres 411.7
2033 Male, age 80, both hemispheres 405.3
2386 Female, age 85, both hemispheres 358.8
2066 Male, age 76, right hemisphere 273.8
Spinal trigeminal nucleus, oral
nTPM: 358.3
2164 Male, age 80, both hemispheres 436.4
1978 Male, age 76, both hemispheres 370.1
2737 Female, age 85, both hemispheres 268.4
Spinal vestibular nucleus
nTPM: 489.2
2384 Male, age 74, both hemispheres 552.7
2796 Male, age 61, both hemispheres 527.6
2806 Female, age 85, both hemispheres 494.8
2748 Male, age 76, both hemispheres 471.5
2780 Male, age 80, both hemispheres 461.3
2186 Female, age 91, both hemispheres 427.2
Subcoeruleus area
nTPM: 389.1
2451 Male, age 74, both hemispheres 482.8
2369 Female, age 85, left hemisphere 405.6
2089 Male, age 76, left hemisphere 382.2
2323 Female, age 91, left hemisphere 339.3
1958 Male, age 80, both hemispheres 335.5
Superior olive
nTPM: 366.6
2020 Male, age 76, both hemispheres 479.0
2561 Female, age 91, both hemispheres 468.6
2329 Male, age 80, right hemisphere 414.4
1875 Female, age 85, both hemispheres 252.4
2364 Male, age 74, right hemisphere 218.8
Superior vestibular nucleus
nTPM: 332.5
2015 Male, age 80, both hemispheres 376.7
2061 Male, age 76, both hemispheres 342.8
2383 Male, age 74, both hemispheres 278.0
Ventral medullary reticular nucleus
nTPM: 475.4
2372 Male, age 61, both hemispheres 477.1
2060 Male, age 76, both hemispheres 473.8
Ventral periolivary nuclei
nTPM: 362.8
2023 Male, age 76, both hemispheres 434.9
2794 Female, age 91, left hemisphere 387.4
2165 Male, age 80, both hemispheres 361.1
2130 Female, age 85, both hemispheres 267.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 399.7
2118 Male, age 80, both hemispheres 500.3
2302 Female, age 91, both hemispheres 404.1
2180 Male, age 61, both hemispheres 386.0
1986 Male, age 76, both hemispheres 362.0
2741 Female, age 85, both hemispheres 346.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 369.8
2161 Male, age 80, both hemispheres 418.2
2359 Male, age 61, both hemispheres 412.5
2840 Female, age 85, both hemispheres 393.1
2456 Female, age 91, both hemispheres 375.9
1959 Male, age 76, both hemispheres 365.0
2449 Male, age 74, both hemispheres 254.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 384.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 384.6
FF:10182-103D2 60 years, female 485.0
FF:10165-103B3 76 years, female 284.2
Medulla oblongata
Scaled Tags Per Million: 272.9
FF:10038-101F2 18-64 years, mixed 391.4
FF:10155-103A2 76 years, female 272.9
FF:10174-103C3 60 years, female 154.4
Pons
Scaled Tags Per Million: 286.3
FF:10033-101E6 18-54 years, mixed 286.3

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 112.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 112.1
Samples: 4

Max nTPM: 125.6
Min nTPM: 91.1
Sample A Female 109.1
Sample B Female 122.4
Sample C Male 125.6
Sample D Male 91.1
Pons
nTPM: 96.3
Samples: 4

Max nTPM: 109.1
Min nTPM: 84.0
Sample A Female 84.0
Sample B Female 98.1
Sample C Male 94.1
Sample D Male 109.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 23.3
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 23.3
Samples: 4

Max nTPM: 27.3
Min nTPM: 20.3
Sample A Male 27.3
Sample B Male 20.9
Sample C Female 20.3
Sample D Female 24.6

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
68196925 Antisense, RP_041116_01_F03, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.3
68196925 Antisense, RP_041116_01_F03, Mouse strain C57BL/6J (56 days, male) 0.3

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