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SLC9A3R2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:102.7 nTPM
FANTOM5:62.7 Scaled Tags Per Million
Pig:49.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001672Antibody HPA066520
Glial cells LowNot detected
Neuronal cells Not detectedNot detected





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

102.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 102.7
Samples: 246

Max nTPM: 343.0
Min nTPM: 30.4
Std nTPM: 52.3
Median nTPM: 88.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 343.0
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 304.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 275.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 262.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 254.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 248.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 247.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 246.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 235.1
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 223.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 222.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 212.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 206.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 201.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 200.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 194.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 190.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 189.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 188.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 187.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 181.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 180.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 180.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 177.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 177.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 175.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 173.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 171.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 164.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 163.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 161.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 159.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 158.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 158.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 156.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 155.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 155.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 154.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 153.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 153.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 153.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 151.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 148.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 144.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 144.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 143.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 140.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 139.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 139.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 136.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 135.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 132.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 130.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 130.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 128.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 124.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 122.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 118.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 116.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 116.2
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 115.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 115.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 115.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 115.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 115.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 115.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 114.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 114.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 113.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 112.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 111.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 110.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 108.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 108.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 108.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 108.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 108.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 108.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 107.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 107.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 106.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 106.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 106.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 105.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 105.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 104.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 104.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 104.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 104.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 103.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 102.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 101.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 101.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 100.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 100.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 100.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 99.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 99.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 98.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 97.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 97.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 97.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 97.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 96.8
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 96.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 95.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 95.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 95.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 95.4
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 93.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 93.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 91.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 90.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 90.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 89.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 88.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 88.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 88.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 88.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 88.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 88.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 87.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 86.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 85.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 85.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 85.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 84.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 84.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 83.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 83.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 83.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 82.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 82.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 82.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 81.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 81.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 81.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 79.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 79.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 79.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 79.5
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 79.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 79.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 79.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 78.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 77.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 77.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 77.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 77.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 77.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 77.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 77.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 77.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 77.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 77.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 77.0
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 77.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 76.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 76.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 76.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 75.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 74.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 74.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 73.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 73.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 73.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 72.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 72.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 72.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 72.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 72.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 71.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 71.5
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 71.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 70.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 69.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 68.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 68.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 68.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 67.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 67.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 66.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 66.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 66.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 65.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 65.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 64.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 64.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 62.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 61.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 61.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 60.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 60.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 60.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 60.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 59.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 59.5
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 58.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 57.7
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 57.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 57.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 57.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 56.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 56.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 56.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 56.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 55.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 55.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 55.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 53.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 53.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 53.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 53.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 52.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 51.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 51.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 51.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 49.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 48.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 48.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 48.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 47.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 47.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 47.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 46.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 45.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 44.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 41.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 41.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 40.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 38.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 35.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 34.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 32.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 32.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 31.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 30.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

62.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 62.7
FF:10164-103B2 76 years, female 62.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

49.6
Pig sample Sample description nTPM
Caudate
nTPM: 49.6
Samples: 4

Max nTPM: 63.5
Min nTPM: 33.7
Sample A Female 33.7
Sample B Female 51.9
Sample C Male 63.5
Sample D Male 49.2

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