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NDUFB4
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  • NDUFB4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:184.0 nTPM
FANTOM5:191.0 Scaled Tags Per Million
Pig:168.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051739
Glial cells High
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 184.0
Samples: 246

Max nTPM: 388.2
Min nTPM: 107.2
Std nTPM: 44.8
Median nTPM: 175.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 388.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 362.2
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 359.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 354.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 353.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 340.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 339.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 279.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 275.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 274.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 272.2
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 270.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 269.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 269.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 260.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 255.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 255.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 252.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 244.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 242.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 241.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 241.4
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 239.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 239.0
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 237.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 236.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 236.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 232.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 232.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 232.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 227.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 225.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 224.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 224.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 221.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 219.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 218.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 216.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 215.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 213.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 213.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 212.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 212.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 212.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 211.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 210.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 209.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 205.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 205.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 204.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 203.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 202.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 202.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 201.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 201.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 199.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 199.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 199.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 198.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 198.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 198.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 197.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 197.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 196.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 196.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 196.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 196.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 196.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 195.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 195.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 194.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 193.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 193.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 193.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 193.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 193.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 193.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 193.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 192.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 190.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 190.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 190.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 189.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 189.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 189.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 188.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 187.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 187.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 187.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 187.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 187.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 187.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 187.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 186.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 186.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 186.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 185.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 185.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 184.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 184.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 183.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 183.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 183.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 183.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 182.9
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 182.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 182.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 181.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 181.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 181.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 180.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 180.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 180.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 179.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 179.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 178.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 178.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 178.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 177.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 177.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 177.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 176.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 175.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 175.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 174.9
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 174.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 173.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 173.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 173.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 172.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 172.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 171.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 171.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 171.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 171.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 171.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 171.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 170.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 170.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 170.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 169.9
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 169.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 168.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 168.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 167.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 167.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 167.4
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 166.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 166.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 166.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 166.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 165.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 165.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 165.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 164.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 164.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 164.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 164.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 164.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 164.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 164.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 163.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 163.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 163.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 163.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 163.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 163.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 162.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 162.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 162.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 162.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 162.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 162.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 161.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 160.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 160.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 159.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 159.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 159.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 158.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 158.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 158.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 158.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 157.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 157.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 157.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 157.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 156.3
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 155.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 155.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 155.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 155.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 155.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 155.4
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 155.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 154.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 154.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 154.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 154.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 153.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 153.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 152.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 152.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 152.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 152.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 150.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 149.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 149.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 149.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 146.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 146.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 145.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 145.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 144.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 143.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 143.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 143.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 143.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 142.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 141.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 140.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 140.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 138.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 136.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 134.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 133.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 132.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 130.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 130.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 129.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 128.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 128.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 127.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 126.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 124.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 124.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 120.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 117.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 114.8
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 112.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 109.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 107.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

191.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 191.0
FF:10164-103B2 76 years, female 191.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

168.3
Pig sample Sample description nTPM
Caudate
nTPM: 168.4
Samples: 4

Max nTPM: 195.2
Min nTPM: 150.2
Sample A Female 150.2
Sample B Female 177.2
Sample C Male 195.2
Sample D Male 150.8

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