PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		29.348
Mouse brain, Intensity
Ponsi 		139.694
RNA expressioni
HPA Brain:33.8 nTPM
FANTOM5:42.0 Scaled Tags Per Million
Pig:12.4 nTPM
Mouse:10.4 nTPM
Allen mouse:1.2 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody CAB079781
Medulla oblongata mean intensity 29.348
intensityi
FRONT BACK
Nucleus of the solitary tract 6.142
Raphe magnus nucleus 8.341
Cochlear nucleus 14.414
Lateral paragigantocellular nucleus 11.571
Raphe pallidus nucleus 15.985
Facial nucleus 8.039
Hypoglossal nucleus 11.306
Ambiguus nucleus 10.861
External cuneate nucleus 10.582
Inferior olivary nucleus 9.604
Raphe obscures nucleus 4.393
Dorsal motor nucleus of vagus 29.348
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 10.435
Parabrachial nucleus 10.571
Principle sensory trigeminal nucleus 10.086
Locus coeruleus 139.694
Pontine nucleus 9.234
Vestibular nucleus 7.970
Pontine reticular nucleus, oral 7.958
Lateral lemniscus 6.412
Superior paraolivary nucleus 6.734

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 33.8
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 26.4
2301 Female, age 85, both hemispheres 29.0
1984 Male, age 76, both hemispheres 27.0
2090 Male, age 80, both hemispheres 25.5
2188 Female, age 91, both hemispheres 24.1
Area postrema
nTPM: 31.6
2799 Male, age 61, both hemispheres 35.1
2054 Male, age 76, both hemispheres 31.4
2306 Male, age 80, both hemispheres 28.3
Dorsal cochlear nucleus
nTPM: 28.1
2802 Male, age 74, right hemisphere 35.3
2187 Female, age 91, both hemispheres 29.4
2058 Male, age 76, both hemispheres 25.7
2378 Male, age 80, both hemispheres 25.4
2370 Male, age 61, both hemispheres 24.9
Dorsal medullary reticular nucleus
nTPM: 26.7
2040 Female, age 85, both hemispheres 29.2
2373 Male, age 61, both hemispheres 27.5
2088 Male, age 76, both hemispheres 23.4
Dorsal motor vagal complex
nTPM: 26.2
2813 Female, age 72, unknown 30.1
2807 Female, age 85, both hemispheres 28.5
2133 Female, age 91, both hemispheres 28.0
2797 Male, age 61, both hemispheres 27.3
2844 Male, age 55, unknown 26.2
2185 Male, age 76, both hemispheres 23.4
2643 Male, age 74, both hemispheres 23.1
2000 Male, age 74, unknown 22.9
Dorsal tegmental nucleus
nTPM: 29.9
2358 Male, age 61, both hemispheres 36.4
2326 Male, age 74, both hemispheres 32.0
1936 Male, age 76, left hemisphere 26.8
2083 Male, age 80, both hemispheres 24.6
Dorsolateral tegmental area
nTPM: 27.7
2141 Male, age 76, both hemispheres 31.7
2654 Male, age 80, both hemispheres 30.3
2360 Male, age 74, both hemispheres 27.3
2751 Female, age 85, both hemispheres 25.6
2337 Male, age 61, both hemispheres 23.6
Gigantocellular reticular nuclei, medullary
nTPM: 26.2
2314 Male, age 61, both hemispheres 30.9
1876 Female, age 85, both hemispheres 29.8
2310 Male, age 80, both hemispheres 25.7
2022 Male, age 76, right hemisphere 25.5
2387 Female, age 91, both hemispheres 24.6
2462 Male, age 74, both hemispheres 20.7
Gigantocellular reticular nuclei, pars
nTPM: 24.5
2084 Female, age 85, both hemispheres 29.4
2168 Male, age 76, both hemispheres 24.4
2706 Male, age 80, both hemispheres 24.4
2330 Male, age 80, both hemispheres 23.4
2336 Male, age 61, both hemispheres 20.7
Inferior olive
nTPM: 30.5
2178 Male, age 61, both hemispheres 33.1
2563 Male, age 74, both hemispheres 31.7
2085 Female, age 85, both hemispheres 30.1
2628 Female, age 91, both hemispheres 29.7
2379 Male, age 80, both hemispheres 27.7
Kolliker-Fuse nucleus
nTPM: 27.7
2315 Male, age 76, right hemisphere 34.0
2793 Female, age 91, left hemisphere 26.1
2163 Male, age 80, both hemispheres 23.0
Lateral lemniscal nuclei
nTPM: 23.6
2453 Male, age 74, right hemisphere 27.1
2169 Male, age 76, both hemispheres 26.0
2746 Female, age 85, left hemisphere 24.4
2320 Female, age 91, left hemisphere 20.6
2036 Male, age 80, both hemispheres 20.0
Lateral medullary reticular nucleus
nTPM: 30.9
2374 Male, age 61, both hemispheres 36.2
2804 Female, age 91, both hemispheres 33.0
2305 Male, age 74, both hemispheres 30.5
2190 Female, age 85, both hemispheres 30.3
2852 Male, age 80, both hemispheres 28.5
2044 Male, age 76, both hemispheres 27.1
Lateral parabrachial nucleus
nTPM: 26.1
2792 Male, age 76, both hemispheres 31.6
2013 Male, age 80, both hemispheres 25.6
2139 Female, age 85, right hemisphere 25.3
2790 Male, age 61, both hemispheres 21.8
Lateral vestibular nucleus
nTPM: 26.8
2311 Male, age 80, both hemispheres 27.5
2184 Male, age 76, both hemispheres 26.0
Locus coeruleus
nTPM: 29.5
2788 Male, age 74, unknown 34.6
1980 Male, age 76, both hemispheres 33.4
2014 Male, age 55, unknown 31.1
2123 Female, age 91, both hemispheres 30.1
2720 Male, age 74, both hemispheres 28.1
2162 Male, age 80, both hemispheres 25.3
2317 Female, age 72, unknown 23.7
Medial olivary nucleus
nTPM: 33.8
1943 Male, age 61, both hemispheres 37.4
2138 Female, age 91, both hemispheres 36.3
1962 Male, age 76, both hemispheres 32.9
2851 Male, age 80, both hemispheres 28.8
Medial parabrachial nucleus
nTPM: 26.0
2463 Female, age 85, right hemisphere 27.9
2170 Female, age 91, both hemispheres 27.1
2854 Male, age 80, both hemispheres 26.6
2156 Male, age 61, both hemispheres 25.5
2786 Male, age 76, both hemispheres 23.0
Medial periolivary nuclei
nTPM: 27.0
2063 Male, age 76, both hemispheres 30.1
2791 Male, age 74, right hemisphere 28.5
2171 Female, age 85, both hemispheres 27.0
2458 Female, age 91, both hemispheres 24.9
2081 Male, age 80, both hemispheres 24.4
Medial vestibular nucleus
nTPM: 26.7
2743 Female, age 85, both hemispheres 30.4
2801 Male, age 74, both hemispheres 28.2
2624 Male, age 61, both hemispheres 26.7
2134 Male, age 76, both hemispheres 25.5
2803 Female, age 91, both hemispheres 24.8
2093 Male, age 80, both hemispheres 24.6
Motor facial nucleus
nTPM: 26.3
2062 Male, age 76, both hemispheres 27.5
2126 Male, age 61, both hemispheres 27.0
2795 Female, age 91, both hemispheres 26.5
2697 Female, age 85, both hemispheres 26.3
2365 Male, age 74, right hemisphere 25.6
2327 Male, age 80, both hemispheres 24.9
Motor hypoglossal nucleus
nTPM: 26.5
2461 Male, age 61, both hemispheres 29.6
2277 Male, age 76, both hemispheres 27.5
2125 Female, age 91, both hemispheres 27.1
2132 Female, age 85, both hemispheres 25.2
2182 Male, age 80, both hemispheres 22.9
Motor trigeminal nucleus
nTPM: 22.3
2309 Male, age 76, both hemispheres 24.0
2079 Male, age 80, both hemispheres 23.8
2560 Male, age 74, both hemispheres 22.9
2335 Male, age 61, both hemispheres 22.0
2321 Female, age 91, both hemispheres 18.9
Nuclei of the trapezoid body
nTPM: 25.2
2166 Male, age 80, both hemispheres 26.1
1983 Male, age 76, both hemispheres 25.9
2159 Male, age 61, both hemispheres 25.7
2735 Female, age 85, both hemispheres 24.9
2368 Female, age 91, both hemispheres 23.5
Nucleus ambiguus
nTPM: 24.0
2071 Male, age 76, both hemispheres 27.9
2096 Female, age 85, both hemispheres 20.1
Nucleus cuneatus
nTPM: 23.1
2381 Male, age 80, both hemispheres 26.1
2564 Male, age 74, both hemispheres 26.1
2808 Female, age 85, both hemispheres 25.5
2562 Male, age 61, both hemispheres 24.1
2380 Male, age 80, both hemispheres 24.0
2376 Male, age 61, both hemispheres 22.5
2131 Male, age 76, both hemispheres 21.0
2100 Male, age 76, both hemispheres 20.0
2805 Female, age 91, both hemispheres 18.1
Nucleus gracilis
nTPM: 25.6
2627 Male, age 74, both hemispheres 30.5
2382 Male, age 80, both hemispheres 23.3
2299 Female, age 85, both hemispheres 22.9
Nucleus raphe magnus
nTPM: 24.7
2160 Male, age 61, both hemispheres 29.6
2172 Female, age 85, both hemispheres 24.9
2455 Male, age 74, both hemispheres 24.1
2051 Male, age 76, both hemispheres 23.8
2459 Female, age 91, both hemispheres 23.2
2328 Male, age 80, both hemispheres 22.4
Nucleus raphe obscurus
nTPM: 26.7
2845 Female, age 85, midline 27.9
2800 Male, age 61, midline 27.6
2142 Male, age 76, midline 24.7
Nucleus raphe pallidus
nTPM: 30.8
1924 Male, age 61, midline 38.1
2145 Male, age 76, midline 28.6
2183 Male, age 80, midline 25.6
Nucleus tractus solitarii
nTPM: 32.6
2144 Female, age 91, right hemisphere 49.7
2191 Female, age 85, both hemispheres 28.1
2656 Male, age 76, both hemispheres 27.9
2307 Male, age 80, both hemispheres 24.7
Paramedian reticular nucleus
nTPM: 27.6
2050 Female, age 85, both hemispheres 29.9
2052 Male, age 76, both hemispheres 29.5
2057 Male, age 80, both hemispheres 25.5
2313 Male, age 61, both hemispheres 25.5
Parvicellular reticular nuclei
nTPM: 25.4
2119 Male, age 80, both hemispheres 28.1
2095 Male, age 76, both hemispheres 27.5
2558 Male, age 74, both hemispheres 20.5
Parvicellular reticular nuclei, medullary
nTPM: 26.9
2181 Male, age 80, left hemisphere 27.6
2091 Female, age 85, both hemispheres 27.5
2189 Female, age 91, both hemispheres 25.6
Pedunculopontine tegmental nucleus
nTPM: 28.8
2334 Male, age 80, both hemispheres 30.2
1921 Female, age 85, both hemispheres 29.0
2338 Male, age 61, both hemispheres 27.4
Peritrigeminal nucleus
nTPM: 27.9
2179 Male, age 61, both hemispheres 30.1
2136 Male, age 76, both hemispheres 27.0
2067 Female, age 85, both hemispheres 26.5
Pontine nuclei
nTPM: 24.9
2727 Male, age 61, right hemisphere 28.5
1863 Male, age 55, unknown 27.8
2109 Female, age 72, unknown 25.2
1968 Male, age 76, left hemisphere 24.6
2787 Female, age 85, both hemispheres 24.5
2454 Male, age 74, left hemisphere 23.8
2115 Male, age 80, left hemisphere 22.7
2319 Female, age 91, both hemispheres 22.5
Pontine raphe nucleus
nTPM: 30.6
2853 Male, age 76, midline 34.0
2122 Female, age 85, midline 27.2
Posteroventral cochlear nucleus
nTPM: 26.9
2371 Male, age 61, both hemispheres 30.3
2752 Female, age 85, both hemispheres 28.3
2341 Male, age 80, both hemispheres 27.7
2070 Male, age 76, both hemispheres 25.4
2135 Female, age 91, both hemispheres 22.6
Prepositus hypoglossal nucleus
nTPM: 29.2
2855 Female, age 85, right hemisphere 32.8
2086 Male, age 80, both hemispheres 25.6
Principal sensory trigeminal nucleus
nTPM: 23.1
2158 Male, age 61, both hemispheres 24.9
2324 Male, age 76, both hemispheres 24.6
2008 Male, age 80, left hemisphere 22.3
2367 Female, age 91, left hemisphere 20.5
Reticular pontine nucleus, caudal
nTPM: 24.5
2559 Male, age 74, both hemispheres 26.2
2092 Male, age 76, both hemispheres 25.7
2457 Female, age 91, both hemispheres 24.9
2332 Male, age 80, right hemisphere 21.4
Reticular pontine nucleus, oral
nTPM: 28.0
2167 Male, age 76, both hemispheres 31.8
2012 Female, age 85, both hemispheres 28.6
2361 Male, age 74, both hemispheres 28.2
1939 Male, age 80, both hemispheres 27.0
2366 Female, age 91, both hemispheres 24.3
Reticulotegmental nucleus
nTPM: 26.4
2322 Female, age 91, both hemispheres 27.9
2452 Male, age 74, both hemispheres 26.9
2325 Male, age 76, both hemispheres 25.5
2333 Male, age 80, both hemispheres 25.3
Spinal trigeminal nucleus, caudal
nTPM: 24.7
2312 Male, age 61, both hemispheres 27.1
2390 Female, age 91, both hemispheres 25.5
2308 Male, age 80, both hemispheres 25.3
2642 Male, age 74, both hemispheres 23.2
2447 Male, age 76, both hemispheres 22.5
Spinal trigeminal nucleus, interpolar
nTPM: 26.9
2625 Male, age 61, both hemispheres 30.3
2033 Male, age 80, both hemispheres 28.7
2066 Male, age 76, right hemisphere 27.5
2386 Female, age 85, both hemispheres 27.1
2389 Female, age 91, both hemispheres 20.6
Spinal trigeminal nucleus, oral
nTPM: 25.3
2737 Female, age 85, both hemispheres 26.1
2164 Male, age 80, both hemispheres 26.0
1978 Male, age 76, both hemispheres 23.8
Spinal vestibular nucleus
nTPM: 26.1
2806 Female, age 85, both hemispheres 28.7
2796 Male, age 61, both hemispheres 26.8
2780 Male, age 80, both hemispheres 26.6
2186 Female, age 91, both hemispheres 26.2
2384 Male, age 74, both hemispheres 25.6
2748 Male, age 76, both hemispheres 22.7
Subcoeruleus area
nTPM: 26.6
1958 Male, age 80, both hemispheres 29.8
2369 Female, age 85, left hemisphere 29.1
2323 Female, age 91, left hemisphere 27.2
2451 Male, age 74, both hemispheres 24.1
2089 Male, age 76, left hemisphere 22.8
Superior olive
nTPM: 23.8
2020 Male, age 76, both hemispheres 28.6
1875 Female, age 85, both hemispheres 25.7
2364 Male, age 74, right hemisphere 22.1
2329 Male, age 80, right hemisphere 21.8
2561 Female, age 91, both hemispheres 20.9
Superior vestibular nucleus
nTPM: 31.0
2383 Male, age 74, both hemispheres 37.6
2015 Male, age 80, both hemispheres 29.2
2061 Male, age 76, both hemispheres 26.1
Ventral medullary reticular nucleus
nTPM: 27.3
2372 Male, age 61, both hemispheres 29.2
2060 Male, age 76, both hemispheres 25.4
Ventral periolivary nuclei
nTPM: 25.2
2130 Female, age 85, both hemispheres 30.1
2023 Male, age 76, both hemispheres 25.8
2165 Male, age 80, both hemispheres 23.7
2794 Female, age 91, left hemisphere 21.4
Ventrolateral medulla, A1-C1 cell groups
nTPM: 28.8
2302 Female, age 91, both hemispheres 30.9
2180 Male, age 61, both hemispheres 30.3
2118 Male, age 80, both hemispheres 28.6
2741 Female, age 85, both hemispheres 28.0
1986 Male, age 76, both hemispheres 26.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 25.1
2840 Female, age 85, both hemispheres 28.9
2449 Male, age 74, both hemispheres 26.3
2161 Male, age 80, both hemispheres 24.6
1959 Male, age 76, both hemispheres 24.3
2359 Male, age 61, both hemispheres 24.1
2456 Female, age 91, both hemispheres 22.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 42.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 27.1
FF:10165-103B3 76 years, female 34.3
FF:10182-103D2 60 years, female 19.8
Medulla oblongata
Scaled Tags Per Million: 42.0
FF:10174-103C3 60 years, female 60.3
FF:10155-103A2 76 years, female 53.1
FF:10038-101F2 18-64 years, mixed 12.7
Pons
Scaled Tags Per Million: 32.4
FF:10033-101E6 18-54 years, mixed 32.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 12.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 8.1
Samples: 4

Max nTPM: 12.5
Min nTPM: 6.1
Sample A Female 12.5
Sample B Female 7.1
Sample C Male 6.8
Sample D Male 6.1
Pons
nTPM: 12.4
Samples: 4

Max nTPM: 15.6
Min nTPM: 9.0
Sample A Female 14.2
Sample B Female 10.7
Sample C Male 15.6
Sample D Male 9.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 10.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 10.4
Samples: 4

Max nTPM: 11.2
Min nTPM: 9.5
Sample A Male 9.5
Sample B Male 10.3
Sample C Female 11.2
Sample D Female 10.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.2
75774683 Antisense, RP_060530_01_D08, Mouse strain C57BL/6J (56 days, male) 1.9
68076976 Antisense, RP_040929_01_B07, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 1.2
75774683 Antisense, RP_060530_01_D08, Mouse strain C57BL/6J (56 days, male) 2.1
68076976 Antisense, RP_040929_01_B07, Mouse strain C57BL/6J (56 days, male) 0.4

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