PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:112.6 nTPM
FANTOM5:117.6 Scaled Tags Per Million
Pig:54.5 nTPM
Mouse:50.1 nTPM
Allen mouse:4.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 112.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 101.1
2301 Female, age 85, both hemispheres 113.1
2188 Female, age 91, both hemispheres 111.4
2090 Male, age 80, both hemispheres 106.0
1984 Male, age 76, both hemispheres 73.7
Area postrema
nTPM: 85.7
2306 Male, age 80, both hemispheres 113.9
2799 Male, age 61, both hemispheres 71.7
2054 Male, age 76, both hemispheres 71.5
Dorsal cochlear nucleus
nTPM: 88.7
2378 Male, age 80, both hemispheres 100.2
2187 Female, age 91, both hemispheres 96.0
2802 Male, age 74, right hemisphere 87.9
2058 Male, age 76, both hemispheres 79.9
2370 Male, age 61, both hemispheres 79.3
Dorsal medullary reticular nucleus
nTPM: 84.7
2040 Female, age 85, both hemispheres 91.8
2088 Male, age 76, both hemispheres 82.7
2373 Male, age 61, both hemispheres 79.5
Dorsal motor vagal complex
nTPM: 76.8
2185 Male, age 76, both hemispheres 99.1
2807 Female, age 85, both hemispheres 87.5
2000 Male, age 74, unknown 78.5
2797 Male, age 61, both hemispheres 76.9
2643 Male, age 74, both hemispheres 73.4
2813 Female, age 72, unknown 70.3
2133 Female, age 91, both hemispheres 66.3
2844 Male, age 55, unknown 62.8
Dorsal tegmental nucleus
nTPM: 80.1
2083 Male, age 80, both hemispheres 96.1
2326 Male, age 74, both hemispheres 83.1
1936 Male, age 76, left hemisphere 73.1
2358 Male, age 61, both hemispheres 68.0
Dorsolateral tegmental area
nTPM: 82.4
2751 Female, age 85, both hemispheres 106.1
2654 Male, age 80, both hemispheres 89.3
2360 Male, age 74, both hemispheres 75.5
2337 Male, age 61, both hemispheres 74.7
2141 Male, age 76, both hemispheres 66.4
Gigantocellular reticular nuclei, medullary
nTPM: 98.8
2387 Female, age 91, both hemispheres 121.5
1876 Female, age 85, both hemispheres 103.7
2314 Male, age 61, both hemispheres 103.7
2022 Male, age 76, right hemisphere 100.3
2310 Male, age 80, both hemispheres 90.7
2462 Male, age 74, both hemispheres 72.7
Gigantocellular reticular nuclei, pars
nTPM: 86.1
2706 Male, age 80, both hemispheres 96.3
2330 Male, age 80, both hemispheres 93.3
2336 Male, age 61, both hemispheres 86.9
2084 Female, age 85, both hemispheres 84.7
2168 Male, age 76, both hemispheres 69.4
Inferior olive
nTPM: 87.9
2628 Female, age 91, both hemispheres 99.8
2178 Male, age 61, both hemispheres 95.0
2379 Male, age 80, both hemispheres 93.7
2085 Female, age 85, both hemispheres 75.6
2563 Male, age 74, both hemispheres 75.6
Kolliker-Fuse nucleus
nTPM: 92.6
2793 Female, age 91, left hemisphere 130.5
2163 Male, age 80, both hemispheres 81.5
2315 Male, age 76, right hemisphere 65.8
Lateral lemniscal nuclei
nTPM: 95.4
2320 Female, age 91, left hemisphere 120.6
2036 Male, age 80, both hemispheres 103.9
2453 Male, age 74, right hemisphere 92.7
2746 Female, age 85, left hemisphere 89.9
2169 Male, age 76, both hemispheres 70.0
Lateral medullary reticular nucleus
nTPM: 89.3
2852 Male, age 80, both hemispheres 100.3
2374 Male, age 61, both hemispheres 97.4
2305 Male, age 74, both hemispheres 88.7
2190 Female, age 85, both hemispheres 87.9
2044 Male, age 76, both hemispheres 82.1
2804 Female, age 91, both hemispheres 79.6
Lateral parabrachial nucleus
nTPM: 96.0
2792 Male, age 76, both hemispheres 110.2
2013 Male, age 80, both hemispheres 108.6
2790 Male, age 61, both hemispheres 86.1
2139 Female, age 85, right hemisphere 79.1
Lateral vestibular nucleus
nTPM: 83.8
2184 Male, age 76, both hemispheres 84.7
2311 Male, age 80, both hemispheres 82.9
Locus coeruleus
nTPM: 59.7
2720 Male, age 74, both hemispheres 72.8
2788 Male, age 74, unknown 64.3
2162 Male, age 80, both hemispheres 61.1
2014 Male, age 55, unknown 59.9
1980 Male, age 76, both hemispheres 56.1
2317 Female, age 72, unknown 54.6
2123 Female, age 91, both hemispheres 49.2
Medial olivary nucleus
nTPM: 100.8
1943 Male, age 61, both hemispheres 110.2
2851 Male, age 80, both hemispheres 108.8
1962 Male, age 76, both hemispheres 99.0
2138 Female, age 91, both hemispheres 85.3
Medial parabrachial nucleus
nTPM: 86.6
2170 Female, age 91, both hemispheres 92.4
2854 Male, age 80, both hemispheres 90.6
2786 Male, age 76, both hemispheres 88.4
2463 Female, age 85, right hemisphere 86.1
2156 Male, age 61, both hemispheres 75.3
Medial periolivary nuclei
nTPM: 85.1
2458 Female, age 91, both hemispheres 108.5
2081 Male, age 80, both hemispheres 106.2
2791 Male, age 74, right hemisphere 78.8
2063 Male, age 76, both hemispheres 66.9
2171 Female, age 85, both hemispheres 65.2
Medial vestibular nucleus
nTPM: 83.2
2803 Female, age 91, both hemispheres 102.7
2801 Male, age 74, both hemispheres 90.7
2093 Male, age 80, both hemispheres 84.3
2624 Male, age 61, both hemispheres 84.0
2743 Female, age 85, both hemispheres 76.1
2134 Male, age 76, both hemispheres 61.5
Motor facial nucleus
nTPM: 82.9
2697 Female, age 85, both hemispheres 104.9
2365 Male, age 74, right hemisphere 88.6
2126 Male, age 61, both hemispheres 82.8
2795 Female, age 91, both hemispheres 81.5
2327 Male, age 80, both hemispheres 79.4
2062 Male, age 76, both hemispheres 60.2
Motor hypoglossal nucleus
nTPM: 83.0
2132 Female, age 85, both hemispheres 96.1
2182 Male, age 80, both hemispheres 91.5
2125 Female, age 91, both hemispheres 86.7
2277 Male, age 76, both hemispheres 73.5
2461 Male, age 61, both hemispheres 67.0
Motor trigeminal nucleus
nTPM: 89.2
2321 Female, age 91, both hemispheres 107.0
2560 Male, age 74, both hemispheres 100.3
2079 Male, age 80, both hemispheres 83.0
2309 Male, age 76, both hemispheres 81.9
2335 Male, age 61, both hemispheres 73.5
Nuclei of the trapezoid body
nTPM: 78.1
2166 Male, age 80, both hemispheres 102.5
2368 Female, age 91, both hemispheres 93.4
2159 Male, age 61, both hemispheres 70.0
1983 Male, age 76, both hemispheres 63.8
2735 Female, age 85, both hemispheres 60.7
Nucleus ambiguus
nTPM: 72.9
2071 Male, age 76, both hemispheres 88.0
2096 Female, age 85, both hemispheres 57.7
Nucleus cuneatus
nTPM: 92.0
2380 Male, age 80, both hemispheres 119.3
2381 Male, age 80, both hemispheres 111.2
2805 Female, age 91, both hemispheres 100.7
2808 Female, age 85, both hemispheres 94.5
2376 Male, age 61, both hemispheres 91.3
2100 Male, age 76, both hemispheres 87.5
2131 Male, age 76, both hemispheres 80.0
2564 Male, age 74, both hemispheres 72.7
2562 Male, age 61, both hemispheres 70.8
Nucleus gracilis
nTPM: 112.6
2382 Male, age 80, both hemispheres 143.3
2627 Male, age 74, both hemispheres 97.5
2299 Female, age 85, both hemispheres 96.9
Nucleus raphe magnus
nTPM: 79.1
2459 Female, age 91, both hemispheres 100.0
2328 Male, age 80, both hemispheres 88.0
2051 Male, age 76, both hemispheres 81.4
2455 Male, age 74, both hemispheres 79.3
2172 Female, age 85, both hemispheres 69.6
2160 Male, age 61, both hemispheres 56.3
Nucleus raphe obscurus
nTPM: 101.1
2142 Male, age 76, midline 108.3
2845 Female, age 85, midline 101.3
2800 Male, age 61, midline 93.8
Nucleus raphe pallidus
nTPM: 92.5
2145 Male, age 76, midline 105.9
2183 Male, age 80, midline 85.9
1924 Male, age 61, midline 85.8
Nucleus tractus solitarii
nTPM: 63.5
2144 Female, age 91, right hemisphere 66.3
2656 Male, age 76, both hemispheres 65.8
2191 Female, age 85, both hemispheres 63.9
2307 Male, age 80, both hemispheres 57.8
Paramedian reticular nucleus
nTPM: 87.8
2052 Male, age 76, both hemispheres 99.6
2057 Male, age 80, both hemispheres 92.0
2050 Female, age 85, both hemispheres 87.8
2313 Male, age 61, both hemispheres 72.0
Parvicellular reticular nuclei
nTPM: 89.3
2558 Male, age 74, both hemispheres 96.2
2095 Male, age 76, both hemispheres 89.0
2119 Male, age 80, both hemispheres 82.7
Parvicellular reticular nuclei, medullary
nTPM: 79.5
2091 Female, age 85, both hemispheres 85.8
2189 Female, age 91, both hemispheres 78.8
2181 Male, age 80, left hemisphere 73.9
Pedunculopontine tegmental nucleus
nTPM: 81.7
2334 Male, age 80, both hemispheres 84.6
2338 Male, age 61, both hemispheres 81.0
1921 Female, age 85, both hemispheres 79.4
Peritrigeminal nucleus
nTPM: 72.8
2136 Male, age 76, both hemispheres 76.9
2179 Male, age 61, both hemispheres 72.8
2067 Female, age 85, both hemispheres 68.9
Pontine nuclei
nTPM: 89.3
2454 Male, age 74, left hemisphere 118.4
2115 Male, age 80, left hemisphere 111.0
2319 Female, age 91, both hemispheres 107.5
2109 Female, age 72, unknown 86.2
1863 Male, age 55, unknown 83.7
1968 Male, age 76, left hemisphere 72.3
2787 Female, age 85, both hemispheres 69.7
2727 Male, age 61, right hemisphere 65.4
Pontine raphe nucleus
nTPM: 75.2
2122 Female, age 85, midline 77.2
2853 Male, age 76, midline 73.1
Posteroventral cochlear nucleus
nTPM: 99.4
2341 Male, age 80, both hemispheres 132.2
2135 Female, age 91, both hemispheres 114.7
2371 Male, age 61, both hemispheres 89.2
2070 Male, age 76, both hemispheres 80.8
2752 Female, age 85, both hemispheres 80.4
Prepositus hypoglossal nucleus
nTPM: 71.5
2855 Female, age 85, right hemisphere 77.9
2086 Male, age 80, both hemispheres 65.0
Principal sensory trigeminal nucleus
nTPM: 81.2
2367 Female, age 91, left hemisphere 111.4
2008 Male, age 80, left hemisphere 76.5
2324 Male, age 76, both hemispheres 75.3
2158 Male, age 61, both hemispheres 61.7
Reticular pontine nucleus, caudal
nTPM: 85.3
2559 Male, age 74, both hemispheres 100.0
2457 Female, age 91, both hemispheres 88.6
2332 Male, age 80, right hemisphere 76.5
2092 Male, age 76, both hemispheres 76.0
Reticular pontine nucleus, oral
nTPM: 107.5
2366 Female, age 91, both hemispheres 136.4
2361 Male, age 74, both hemispheres 112.2
1939 Male, age 80, both hemispheres 100.6
2167 Male, age 76, both hemispheres 94.3
2012 Female, age 85, both hemispheres 94.0
Reticulotegmental nucleus
nTPM: 85.5
2452 Male, age 74, both hemispheres 94.7
2322 Female, age 91, both hemispheres 91.2
2333 Male, age 80, both hemispheres 86.0
2325 Male, age 76, both hemispheres 70.3
Spinal trigeminal nucleus, caudal
nTPM: 82.4
2312 Male, age 61, both hemispheres 95.6
2308 Male, age 80, both hemispheres 90.8
2390 Female, age 91, both hemispheres 87.9
2642 Male, age 74, both hemispheres 72.6
2447 Male, age 76, both hemispheres 65.1
Spinal trigeminal nucleus, interpolar
nTPM: 78.9
2389 Female, age 91, both hemispheres 98.7
2386 Female, age 85, both hemispheres 80.9
2033 Male, age 80, both hemispheres 80.5
2625 Male, age 61, both hemispheres 73.9
2066 Male, age 76, right hemisphere 60.5
Spinal trigeminal nucleus, oral
nTPM: 77.8
2164 Male, age 80, both hemispheres 82.7
1978 Male, age 76, both hemispheres 80.3
2737 Female, age 85, both hemispheres 70.3
Spinal vestibular nucleus
nTPM: 88.6
2806 Female, age 85, both hemispheres 99.3
2384 Male, age 74, both hemispheres 93.9
2186 Female, age 91, both hemispheres 89.8
2748 Male, age 76, both hemispheres 88.6
2780 Male, age 80, both hemispheres 81.7
2796 Male, age 61, both hemispheres 78.3
Subcoeruleus area
nTPM: 87.5
2369 Female, age 85, left hemisphere 125.3
2451 Male, age 74, both hemispheres 86.5
1958 Male, age 80, both hemispheres 84.6
2089 Male, age 76, left hemisphere 76.2
2323 Female, age 91, left hemisphere 64.9
Superior olive
nTPM: 96.7
2561 Female, age 91, both hemispheres 109.7
2329 Male, age 80, right hemisphere 101.2
2020 Male, age 76, both hemispheres 95.1
1875 Female, age 85, both hemispheres 91.1
2364 Male, age 74, right hemisphere 86.4
Superior vestibular nucleus
nTPM: 74.3
2015 Male, age 80, both hemispheres 78.2
2383 Male, age 74, both hemispheres 77.0
2061 Male, age 76, both hemispheres 67.8
Ventral medullary reticular nucleus
nTPM: 93.3
2372 Male, age 61, both hemispheres 99.4
2060 Male, age 76, both hemispheres 87.3
Ventral periolivary nuclei
nTPM: 83.8
2794 Female, age 91, left hemisphere 96.7
2023 Male, age 76, both hemispheres 88.9
2165 Male, age 80, both hemispheres 78.6
2130 Female, age 85, both hemispheres 71.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 81.4
2118 Male, age 80, both hemispheres 100.0
2302 Female, age 91, both hemispheres 84.7
2180 Male, age 61, both hemispheres 83.7
1986 Male, age 76, both hemispheres 70.4
2741 Female, age 85, both hemispheres 68.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 92.3
2456 Female, age 91, both hemispheres 105.6
2840 Female, age 85, both hemispheres 105.2
2161 Male, age 80, both hemispheres 90.7
2449 Male, age 74, both hemispheres 88.3
2359 Male, age 61, both hemispheres 83.5
1959 Male, age 76, both hemispheres 80.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 117.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 74.4
FF:10165-103B3 76 years, female 84.2
FF:10182-103D2 60 years, female 64.5
Medulla oblongata
Scaled Tags Per Million: 69.8
FF:10155-103A2 76 years, female 83.0
FF:10038-101F2 18-64 years, mixed 76.2
FF:10174-103C3 60 years, female 50.2
Pons
Scaled Tags Per Million: 117.6
FF:10033-101E6 18-54 years, mixed 117.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 54.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 54.5
Samples: 4

Max nTPM: 62.1
Min nTPM: 46.2
Sample A Female 62.1
Sample B Female 46.2
Sample C Male 48.7
Sample D Male 60.8
Pons
nTPM: 51.0
Samples: 4

Max nTPM: 73.0
Min nTPM: 39.1
Sample A Female 42.6
Sample B Female 39.1
Sample C Male 49.1
Sample D Male 73.0

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 50.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 50.1
Samples: 4

Max nTPM: 52.4
Min nTPM: 47.9
Sample A Male 52.4
Sample B Male 47.9
Sample C Female 49.7
Sample D Female 50.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 4.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 4.0
68924745 Antisense, RP_050303_02_H10, Mouse strain C57BL/6J (56 days, male) 4.0
Pons
Expression energy: 4.4
68924745 Antisense, RP_050303_02_H10, Mouse strain C57BL/6J (56 days, male) 4.4

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