PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:55.6 nTPM
FANTOM5:13.7 Scaled Tags Per Million
Pig:41.3 nTPM
Mouse:22.2 nTPM
Allen mouse:2.0 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 55.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 44.3
2090 Male, age 80, both hemispheres 51.2
2188 Female, age 91, both hemispheres 46.7
1984 Male, age 76, both hemispheres 42.3
2301 Female, age 85, both hemispheres 36.9
Area postrema
nTPM: 48.3
2799 Male, age 61, both hemispheres 56.4
2306 Male, age 80, both hemispheres 53.1
2054 Male, age 76, both hemispheres 35.5
Dorsal cochlear nucleus
nTPM: 45.6
2187 Female, age 91, both hemispheres 47.5
2802 Male, age 74, right hemisphere 47.5
2058 Male, age 76, both hemispheres 45.8
2370 Male, age 61, both hemispheres 44.8
2378 Male, age 80, both hemispheres 42.4
Dorsal medullary reticular nucleus
nTPM: 47.0
2373 Male, age 61, both hemispheres 49.7
2040 Female, age 85, both hemispheres 46.4
2088 Male, age 76, both hemispheres 45.0
Dorsal motor vagal complex
nTPM: 42.4
2797 Male, age 61, both hemispheres 47.8
2185 Male, age 76, both hemispheres 47.4
2000 Male, age 74, unknown 47.3
2844 Male, age 55, unknown 46.9
2643 Male, age 74, both hemispheres 45.5
2133 Female, age 91, both hemispheres 43.4
2813 Female, age 72, unknown 32.4
2807 Female, age 85, both hemispheres 28.8
Dorsal tegmental nucleus
nTPM: 46.0
2083 Male, age 80, both hemispheres 55.7
2326 Male, age 74, both hemispheres 48.4
1936 Male, age 76, left hemisphere 41.7
2358 Male, age 61, both hemispheres 38.2
Dorsolateral tegmental area
nTPM: 45.7
2751 Female, age 85, both hemispheres 52.7
2654 Male, age 80, both hemispheres 52.5
2337 Male, age 61, both hemispheres 43.4
2360 Male, age 74, both hemispheres 40.3
2141 Male, age 76, both hemispheres 39.5
Gigantocellular reticular nuclei, medullary
nTPM: 46.5
2314 Male, age 61, both hemispheres 54.2
1876 Female, age 85, both hemispheres 48.9
2462 Male, age 74, both hemispheres 46.8
2310 Male, age 80, both hemispheres 45.7
2387 Female, age 91, both hemispheres 43.4
2022 Male, age 76, right hemisphere 39.7
Gigantocellular reticular nuclei, pars
nTPM: 43.5
2084 Female, age 85, both hemispheres 48.7
2336 Male, age 61, both hemispheres 46.2
2168 Male, age 76, both hemispheres 44.6
2706 Male, age 80, both hemispheres 39.5
2330 Male, age 80, both hemispheres 38.6
Inferior olive
nTPM: 51.3
2563 Male, age 74, both hemispheres 57.7
2178 Male, age 61, both hemispheres 55.0
2085 Female, age 85, both hemispheres 53.7
2379 Male, age 80, both hemispheres 45.4
2628 Female, age 91, both hemispheres 44.7
Kolliker-Fuse nucleus
nTPM: 44.9
2163 Male, age 80, both hemispheres 46.0
2793 Female, age 91, left hemisphere 45.9
2315 Male, age 76, right hemisphere 42.9
Lateral lemniscal nuclei
nTPM: 45.5
2746 Female, age 85, left hemisphere 50.3
2320 Female, age 91, left hemisphere 46.6
2453 Male, age 74, right hemisphere 46.2
2169 Male, age 76, both hemispheres 45.4
2036 Male, age 80, both hemispheres 38.8
Lateral medullary reticular nucleus
nTPM: 47.2
2852 Male, age 80, both hemispheres 54.0
2804 Female, age 91, both hemispheres 49.3
2305 Male, age 74, both hemispheres 46.6
2190 Female, age 85, both hemispheres 45.3
2044 Male, age 76, both hemispheres 44.2
2374 Male, age 61, both hemispheres 44.1
Lateral parabrachial nucleus
nTPM: 46.2
2013 Male, age 80, both hemispheres 49.7
2139 Female, age 85, right hemisphere 49.1
2790 Male, age 61, both hemispheres 45.0
2792 Male, age 76, both hemispheres 41.2
Lateral vestibular nucleus
nTPM: 45.7
2311 Male, age 80, both hemispheres 46.4
2184 Male, age 76, both hemispheres 45.1
Locus coeruleus
nTPM: 42.7
2317 Female, age 72, unknown 51.7
2014 Male, age 55, unknown 45.5
1980 Male, age 76, both hemispheres 43.6
2123 Female, age 91, both hemispheres 43.3
2162 Male, age 80, both hemispheres 43.2
2788 Male, age 74, unknown 37.6
2720 Male, age 74, both hemispheres 33.9
Medial olivary nucleus
nTPM: 52.5
2138 Female, age 91, both hemispheres 60.1
1943 Male, age 61, both hemispheres 54.5
1962 Male, age 76, both hemispheres 52.9
2851 Male, age 80, both hemispheres 42.5
Medial parabrachial nucleus
nTPM: 47.5
2463 Female, age 85, right hemisphere 55.9
2170 Female, age 91, both hemispheres 50.1
2156 Male, age 61, both hemispheres 49.2
2786 Male, age 76, both hemispheres 42.7
2854 Male, age 80, both hemispheres 39.7
Medial periolivary nuclei
nTPM: 45.1
2063 Male, age 76, both hemispheres 52.0
2081 Male, age 80, both hemispheres 50.5
2458 Female, age 91, both hemispheres 41.5
2171 Female, age 85, both hemispheres 41.4
2791 Male, age 74, right hemisphere 40.2
Medial vestibular nucleus
nTPM: 44.1
2093 Male, age 80, both hemispheres 53.5
2803 Female, age 91, both hemispheres 45.1
2801 Male, age 74, both hemispheres 43.3
2743 Female, age 85, both hemispheres 42.1
2134 Male, age 76, both hemispheres 40.5
2624 Male, age 61, both hemispheres 40.0
Motor facial nucleus
nTPM: 45.8
2062 Male, age 76, both hemispheres 54.1
2126 Male, age 61, both hemispheres 51.7
2795 Female, age 91, both hemispheres 46.1
2365 Male, age 74, right hemisphere 45.7
2327 Male, age 80, both hemispheres 38.6
2697 Female, age 85, both hemispheres 38.4
Motor hypoglossal nucleus
nTPM: 42.9
2125 Female, age 91, both hemispheres 53.6
2182 Male, age 80, both hemispheres 44.9
2132 Female, age 85, both hemispheres 44.4
2277 Male, age 76, both hemispheres 38.9
2461 Male, age 61, both hemispheres 32.4
Motor trigeminal nucleus
nTPM: 45.3
2560 Male, age 74, both hemispheres 47.1
2079 Male, age 80, both hemispheres 46.7
2309 Male, age 76, both hemispheres 45.8
2335 Male, age 61, both hemispheres 44.5
2321 Female, age 91, both hemispheres 42.4
Nuclei of the trapezoid body
nTPM: 46.2
1983 Male, age 76, both hemispheres 52.6
2735 Female, age 85, both hemispheres 45.5
2368 Female, age 91, both hemispheres 45.0
2166 Male, age 80, both hemispheres 44.4
2159 Male, age 61, both hemispheres 43.4
Nucleus ambiguus
nTPM: 55.6
2096 Female, age 85, both hemispheres 60.1
2071 Male, age 76, both hemispheres 51.2
Nucleus cuneatus
nTPM: 47.5
2564 Male, age 74, both hemispheres 55.5
2100 Male, age 76, both hemispheres 51.9
2131 Male, age 76, both hemispheres 49.6
2376 Male, age 61, both hemispheres 49.5
2562 Male, age 61, both hemispheres 46.8
2380 Male, age 80, both hemispheres 46.4
2381 Male, age 80, both hemispheres 46.4
2805 Female, age 91, both hemispheres 45.4
2808 Female, age 85, both hemispheres 35.9
Nucleus gracilis
nTPM: 45.4
2382 Male, age 80, both hemispheres 47.8
2627 Male, age 74, both hemispheres 46.4
2299 Female, age 85, both hemispheres 41.9
Nucleus raphe magnus
nTPM: 44.7
2051 Male, age 76, both hemispheres 48.1
2459 Female, age 91, both hemispheres 46.9
2455 Male, age 74, both hemispheres 46.5
2328 Male, age 80, both hemispheres 44.1
2160 Male, age 61, both hemispheres 43.3
2172 Female, age 85, both hemispheres 39.4
Nucleus raphe obscurus
nTPM: 48.9
2142 Male, age 76, midline 53.3
2800 Male, age 61, midline 48.4
2845 Female, age 85, midline 45.0
Nucleus raphe pallidus
nTPM: 49.6
1924 Male, age 61, midline 56.4
2145 Male, age 76, midline 48.4
2183 Male, age 80, midline 44.0
Nucleus tractus solitarii
nTPM: 33.7
2656 Male, age 76, both hemispheres 39.1
2144 Female, age 91, right hemisphere 35.4
2307 Male, age 80, both hemispheres 31.2
2191 Female, age 85, both hemispheres 29.1
Paramedian reticular nucleus
nTPM: 43.5
2057 Male, age 80, both hemispheres 57.0
2050 Female, age 85, both hemispheres 44.1
2313 Male, age 61, both hemispheres 43.6
2052 Male, age 76, both hemispheres 29.6
Parvicellular reticular nuclei
nTPM: 48.2
2119 Male, age 80, both hemispheres 53.6
2095 Male, age 76, both hemispheres 46.9
2558 Male, age 74, both hemispheres 44.2
Parvicellular reticular nuclei, medullary
nTPM: 45.9
2189 Female, age 91, both hemispheres 49.9
2091 Female, age 85, both hemispheres 45.5
2181 Male, age 80, left hemisphere 42.2
Pedunculopontine tegmental nucleus
nTPM: 40.5
2334 Male, age 80, both hemispheres 43.0
1921 Female, age 85, both hemispheres 42.9
2338 Male, age 61, both hemispheres 35.5
Peritrigeminal nucleus
nTPM: 47.7
2067 Female, age 85, both hemispheres 50.0
2136 Male, age 76, both hemispheres 47.5
2179 Male, age 61, both hemispheres 45.5
Pontine nuclei
nTPM: 52.4
2787 Female, age 85, both hemispheres 57.3
1968 Male, age 76, left hemisphere 55.9
2109 Female, age 72, unknown 55.0
1863 Male, age 55, unknown 53.1
2727 Male, age 61, right hemisphere 52.0
2454 Male, age 74, left hemisphere 49.6
2115 Male, age 80, left hemisphere 48.8
2319 Female, age 91, both hemispheres 47.8
Pontine raphe nucleus
nTPM: 44.6
2122 Female, age 85, midline 48.0
2853 Male, age 76, midline 41.2
Posteroventral cochlear nucleus
nTPM: 47.2
2135 Female, age 91, both hemispheres 50.6
2341 Male, age 80, both hemispheres 48.4
2752 Female, age 85, both hemispheres 47.0
2070 Male, age 76, both hemispheres 45.4
2371 Male, age 61, both hemispheres 44.6
Prepositus hypoglossal nucleus
nTPM: 43.9
2086 Male, age 80, both hemispheres 45.1
2855 Female, age 85, right hemisphere 42.7
Principal sensory trigeminal nucleus
nTPM: 43.3
2158 Male, age 61, both hemispheres 45.1
2367 Female, age 91, left hemisphere 44.7
2008 Male, age 80, left hemisphere 43.5
2324 Male, age 76, both hemispheres 39.7
Reticular pontine nucleus, caudal
nTPM: 47.9
2559 Male, age 74, both hemispheres 53.3
2457 Female, age 91, both hemispheres 48.3
2092 Male, age 76, both hemispheres 47.6
2332 Male, age 80, right hemisphere 42.4
Reticular pontine nucleus, oral
nTPM: 48.9
2361 Male, age 74, both hemispheres 53.7
1939 Male, age 80, both hemispheres 52.1
2012 Female, age 85, both hemispheres 48.2
2366 Female, age 91, both hemispheres 45.8
2167 Male, age 76, both hemispheres 44.9
Reticulotegmental nucleus
nTPM: 47.1
2452 Male, age 74, both hemispheres 51.7
2322 Female, age 91, both hemispheres 47.7
2333 Male, age 80, both hemispheres 47.5
2325 Male, age 76, both hemispheres 41.4
Spinal trigeminal nucleus, caudal
nTPM: 46.0
2447 Male, age 76, both hemispheres 50.9
2308 Male, age 80, both hemispheres 47.1
2312 Male, age 61, both hemispheres 45.9
2390 Female, age 91, both hemispheres 44.8
2642 Male, age 74, both hemispheres 41.2
Spinal trigeminal nucleus, interpolar
nTPM: 43.0
2066 Male, age 76, right hemisphere 45.6
2033 Male, age 80, both hemispheres 45.3
2389 Female, age 91, both hemispheres 45.3
2386 Female, age 85, both hemispheres 41.9
2625 Male, age 61, both hemispheres 36.8
Spinal trigeminal nucleus, oral
nTPM: 44.3
2164 Male, age 80, both hemispheres 45.9
1978 Male, age 76, both hemispheres 43.6
2737 Female, age 85, both hemispheres 43.3
Spinal vestibular nucleus
nTPM: 46.4
2780 Male, age 80, both hemispheres 50.7
2748 Male, age 76, both hemispheres 49.5
2384 Male, age 74, both hemispheres 48.1
2186 Female, age 91, both hemispheres 47.5
2806 Female, age 85, both hemispheres 41.6
2796 Male, age 61, both hemispheres 40.8
Subcoeruleus area
nTPM: 47.1
2369 Female, age 85, left hemisphere 54.5
2451 Male, age 74, both hemispheres 47.4
1958 Male, age 80, both hemispheres 46.6
2089 Male, age 76, left hemisphere 45.6
2323 Female, age 91, left hemisphere 41.4
Superior olive
nTPM: 45.2
2020 Male, age 76, both hemispheres 50.3
2364 Male, age 74, right hemisphere 47.3
1875 Female, age 85, both hemispheres 46.0
2329 Male, age 80, right hemisphere 43.6
2561 Female, age 91, both hemispheres 39.1
Superior vestibular nucleus
nTPM: 43.5
2015 Male, age 80, both hemispheres 46.3
2061 Male, age 76, both hemispheres 45.4
2383 Male, age 74, both hemispheres 38.7
Ventral medullary reticular nucleus
nTPM: 50.3
2372 Male, age 61, both hemispheres 51.0
2060 Male, age 76, both hemispheres 49.6
Ventral periolivary nuclei
nTPM: 40.2
2023 Male, age 76, both hemispheres 45.2
2165 Male, age 80, both hemispheres 42.2
2130 Female, age 85, both hemispheres 41.1
2794 Female, age 91, left hemisphere 32.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 48.1
2118 Male, age 80, both hemispheres 50.3
2302 Female, age 91, both hemispheres 50.0
2180 Male, age 61, both hemispheres 49.2
2741 Female, age 85, both hemispheres 46.3
1986 Male, age 76, both hemispheres 44.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 45.3
2456 Female, age 91, both hemispheres 51.2
2449 Male, age 74, both hemispheres 47.5
1959 Male, age 76, both hemispheres 46.8
2161 Male, age 80, both hemispheres 43.9
2840 Female, age 85, both hemispheres 41.3
2359 Male, age 61, both hemispheres 40.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 12.7
FF:10165-103B3 76 years, female 17.3
FF:10182-103D2 60 years, female 8.2
Medulla oblongata
Scaled Tags Per Million: 9.7
FF:10155-103A2 76 years, female 12.1
FF:10038-101F2 18-64 years, mixed 11.3
FF:10174-103C3 60 years, female 5.7
Pons
Scaled Tags Per Million: 13.7
FF:10033-101E6 18-54 years, mixed 13.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 41.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 41.3
Samples: 4

Max nTPM: 44.8
Min nTPM: 38.9
Sample A Female 38.9
Sample B Female 40.2
Sample C Male 44.8
Sample D Male 41.2
Pons
nTPM: 39.7
Samples: 4

Max nTPM: 40.5
Min nTPM: 39.0
Sample A Female 39.8
Sample B Female 39.0
Sample C Male 39.4
Sample D Male 40.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 22.2
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 22.2
Samples: 4

Max nTPM: 25.1
Min nTPM: 20.7
Sample A Male 25.1
Sample B Male 20.7
Sample C Female 22.1
Sample D Female 20.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 2.0
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 2.0
75831721 Antisense, RP_060601_02_A06, Mouse strain C57BL/6J (56 days, male) 2.0
Pons
Expression energy: 1.7
75831721 Antisense, RP_060601_02_A06, Mouse strain C57BL/6J (56 days, male) 1.7

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