PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:253.6 nTPM
FANTOM5:313.6 Scaled Tags Per Million
Pig:142.8 nTPM
Mouse:200.0 nTPM
Allen mouse:16.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 253.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 148.5
2188 Female, age 91, both hemispheres 175.3
1984 Male, age 76, both hemispheres 150.3
2301 Female, age 85, both hemispheres 146.1
2090 Male, age 80, both hemispheres 122.2
Area postrema
nTPM: 113.7
2054 Male, age 76, both hemispheres 146.5
2306 Male, age 80, both hemispheres 110.0
2799 Male, age 61, both hemispheres 84.5
Dorsal cochlear nucleus
nTPM: 108.3
2187 Female, age 91, both hemispheres 152.4
2802 Male, age 74, right hemisphere 107.0
2058 Male, age 76, both hemispheres 98.2
2370 Male, age 61, both hemispheres 93.9
2378 Male, age 80, both hemispheres 90.0
Dorsal medullary reticular nucleus
nTPM: 136.9
2040 Female, age 85, both hemispheres 195.4
2088 Male, age 76, both hemispheres 118.0
2373 Male, age 61, both hemispheres 97.4
Dorsal motor vagal complex
nTPM: 152.4
2133 Female, age 91, both hemispheres 274.3
2000 Male, age 74, unknown 200.5
2844 Male, age 55, unknown 160.8
2813 Female, age 72, unknown 142.2
2643 Male, age 74, both hemispheres 140.9
2807 Female, age 85, both hemispheres 109.0
2185 Male, age 76, both hemispheres 105.4
2797 Male, age 61, both hemispheres 85.9
Dorsal tegmental nucleus
nTPM: 141.5
2083 Male, age 80, both hemispheres 168.9
2358 Male, age 61, both hemispheres 151.6
1936 Male, age 76, left hemisphere 125.9
2326 Male, age 74, both hemispheres 119.9
Dorsolateral tegmental area
nTPM: 135.0
2751 Female, age 85, both hemispheres 169.5
2337 Male, age 61, both hemispheres 146.8
2654 Male, age 80, both hemispheres 142.5
2141 Male, age 76, both hemispheres 117.4
2360 Male, age 74, both hemispheres 98.8
Gigantocellular reticular nuclei, medullary
nTPM: 145.4
2462 Male, age 74, both hemispheres 184.5
1876 Female, age 85, both hemispheres 163.7
2310 Male, age 80, both hemispheres 155.9
2022 Male, age 76, right hemisphere 142.7
2314 Male, age 61, both hemispheres 122.0
2387 Female, age 91, both hemispheres 103.5
Gigantocellular reticular nuclei, pars
nTPM: 175.0
2168 Male, age 76, both hemispheres 224.5
2330 Male, age 80, both hemispheres 169.0
2084 Female, age 85, both hemispheres 166.4
2706 Male, age 80, both hemispheres 163.0
2336 Male, age 61, both hemispheres 152.0
Inferior olive
nTPM: 123.1
2628 Female, age 91, both hemispheres 162.4
2563 Male, age 74, both hemispheres 148.5
2085 Female, age 85, both hemispheres 131.5
2178 Male, age 61, both hemispheres 88.8
2379 Male, age 80, both hemispheres 84.3
Kolliker-Fuse nucleus
nTPM: 221.6
2163 Male, age 80, both hemispheres 293.4
2793 Female, age 91, left hemisphere 230.7
2315 Male, age 76, right hemisphere 140.6
Lateral lemniscal nuclei
nTPM: 197.3
2169 Male, age 76, both hemispheres 239.0
2453 Male, age 74, right hemisphere 234.2
2746 Female, age 85, left hemisphere 188.3
2036 Male, age 80, both hemispheres 166.7
2320 Female, age 91, left hemisphere 158.3
Lateral medullary reticular nucleus
nTPM: 149.0
2044 Male, age 76, both hemispheres 182.6
2305 Male, age 74, both hemispheres 178.2
2374 Male, age 61, both hemispheres 139.3
2852 Male, age 80, both hemispheres 135.9
2190 Female, age 85, both hemispheres 135.3
2804 Female, age 91, both hemispheres 122.7
Lateral parabrachial nucleus
nTPM: 158.6
2139 Female, age 85, right hemisphere 207.5
2013 Male, age 80, both hemispheres 150.0
2792 Male, age 76, both hemispheres 146.3
2790 Male, age 61, both hemispheres 130.5
Lateral vestibular nucleus
nTPM: 206.2
2184 Male, age 76, both hemispheres 259.7
2311 Male, age 80, both hemispheres 152.7
Locus coeruleus
nTPM: 182.8
2123 Female, age 91, both hemispheres 252.5
2720 Male, age 74, both hemispheres 239.8
2014 Male, age 55, unknown 195.1
1980 Male, age 76, both hemispheres 157.9
2162 Male, age 80, both hemispheres 153.1
2788 Male, age 74, unknown 145.1
2317 Female, age 72, unknown 136.4
Medial olivary nucleus
nTPM: 116.9
1962 Male, age 76, both hemispheres 152.8
2851 Male, age 80, both hemispheres 137.6
1943 Male, age 61, both hemispheres 89.5
2138 Female, age 91, both hemispheres 87.5
Medial parabrachial nucleus
nTPM: 165.9
2854 Male, age 80, both hemispheres 195.0
2463 Female, age 85, right hemisphere 179.6
2170 Female, age 91, both hemispheres 165.5
2156 Male, age 61, both hemispheres 162.8
2786 Male, age 76, both hemispheres 126.8
Medial periolivary nuclei
nTPM: 189.7
2063 Male, age 76, both hemispheres 239.9
2171 Female, age 85, both hemispheres 239.0
2791 Male, age 74, right hemisphere 162.4
2458 Female, age 91, both hemispheres 157.1
2081 Male, age 80, both hemispheres 150.1
Medial vestibular nucleus
nTPM: 228.7
2134 Male, age 76, both hemispheres 290.3
2801 Male, age 74, both hemispheres 283.5
2624 Male, age 61, both hemispheres 271.7
2093 Male, age 80, both hemispheres 189.8
2803 Female, age 91, both hemispheres 179.1
2743 Female, age 85, both hemispheres 157.6
Motor facial nucleus
nTPM: 197.6
2697 Female, age 85, both hemispheres 244.0
2062 Male, age 76, both hemispheres 232.6
2365 Male, age 74, right hemisphere 219.8
2327 Male, age 80, both hemispheres 189.2
2126 Male, age 61, both hemispheres 159.1
2795 Female, age 91, both hemispheres 140.7
Motor hypoglossal nucleus
nTPM: 225.6
2461 Male, age 61, both hemispheres 361.2
2132 Female, age 85, both hemispheres 219.1
2125 Female, age 91, both hemispheres 207.3
2182 Male, age 80, both hemispheres 189.5
2277 Male, age 76, both hemispheres 150.9
Motor trigeminal nucleus
nTPM: 154.3
2079 Male, age 80, both hemispheres 201.6
2560 Male, age 74, both hemispheres 177.2
2321 Female, age 91, both hemispheres 137.3
2309 Male, age 76, both hemispheres 128.7
2335 Male, age 61, both hemispheres 126.5
Nuclei of the trapezoid body
nTPM: 214.1
2159 Male, age 61, both hemispheres 293.5
2735 Female, age 85, both hemispheres 228.7
1983 Male, age 76, both hemispheres 225.0
2166 Male, age 80, both hemispheres 192.0
2368 Female, age 91, both hemispheres 131.4
Nucleus ambiguus
nTPM: 156.7
2096 Female, age 85, both hemispheres 181.0
2071 Male, age 76, both hemispheres 132.3
Nucleus cuneatus
nTPM: 122.8
2131 Male, age 76, both hemispheres 184.1
2100 Male, age 76, both hemispheres 154.9
2564 Male, age 74, both hemispheres 140.2
2381 Male, age 80, both hemispheres 123.6
2808 Female, age 85, both hemispheres 120.5
2376 Male, age 61, both hemispheres 100.6
2805 Female, age 91, both hemispheres 98.8
2380 Male, age 80, both hemispheres 91.4
2562 Male, age 61, both hemispheres 91.1
Nucleus gracilis
nTPM: 131.7
2627 Male, age 74, both hemispheres 174.7
2382 Male, age 80, both hemispheres 130.5
2299 Female, age 85, both hemispheres 90.0
Nucleus raphe magnus
nTPM: 223.0
2160 Male, age 61, both hemispheres 312.3
2172 Female, age 85, both hemispheres 261.9
2455 Male, age 74, both hemispheres 230.1
2328 Male, age 80, both hemispheres 198.1
2051 Male, age 76, both hemispheres 179.0
2459 Female, age 91, both hemispheres 156.6
Nucleus raphe obscurus
nTPM: 150.6
2845 Female, age 85, midline 176.8
2800 Male, age 61, midline 138.2
2142 Male, age 76, midline 136.8
Nucleus raphe pallidus
nTPM: 169.5
1924 Male, age 61, midline 197.2
2183 Male, age 80, midline 162.9
2145 Male, age 76, midline 148.5
Nucleus tractus solitarii
nTPM: 154.9
2144 Female, age 91, right hemisphere 188.3
2191 Female, age 85, both hemispheres 173.1
2307 Male, age 80, both hemispheres 140.0
2656 Male, age 76, both hemispheres 118.0
Paramedian reticular nucleus
nTPM: 167.6
2050 Female, age 85, both hemispheres 221.0
2057 Male, age 80, both hemispheres 164.5
2313 Male, age 61, both hemispheres 156.6
2052 Male, age 76, both hemispheres 128.4
Parvicellular reticular nuclei
nTPM: 166.1
2558 Male, age 74, both hemispheres 181.7
2095 Male, age 76, both hemispheres 167.6
2119 Male, age 80, both hemispheres 149.0
Parvicellular reticular nuclei, medullary
nTPM: 204.8
2091 Female, age 85, both hemispheres 248.0
2189 Female, age 91, both hemispheres 211.1
2181 Male, age 80, left hemisphere 155.1
Pedunculopontine tegmental nucleus
nTPM: 137.0
2338 Male, age 61, both hemispheres 152.4
2334 Male, age 80, both hemispheres 133.7
1921 Female, age 85, both hemispheres 125.0
Peritrigeminal nucleus
nTPM: 172.1
2136 Male, age 76, both hemispheres 176.5
2067 Female, age 85, both hemispheres 176.0
2179 Male, age 61, both hemispheres 163.8
Pontine nuclei
nTPM: 236.9
1863 Male, age 55, unknown 327.6
2787 Female, age 85, both hemispheres 299.4
2727 Male, age 61, right hemisphere 286.4
2109 Female, age 72, unknown 258.5
1968 Male, age 76, left hemisphere 214.7
2454 Male, age 74, left hemisphere 199.9
2115 Male, age 80, left hemisphere 162.1
2319 Female, age 91, both hemispheres 147.0
Pontine raphe nucleus
nTPM: 154.6
2122 Female, age 85, midline 191.3
2853 Male, age 76, midline 117.9
Posteroventral cochlear nucleus
nTPM: 133.8
2752 Female, age 85, both hemispheres 159.8
2070 Male, age 76, both hemispheres 144.2
2341 Male, age 80, both hemispheres 137.8
2135 Female, age 91, both hemispheres 127.4
2371 Male, age 61, both hemispheres 99.9
Prepositus hypoglossal nucleus
nTPM: 172.5
2855 Female, age 85, right hemisphere 207.9
2086 Male, age 80, both hemispheres 137.1
Principal sensory trigeminal nucleus
nTPM: 224.7
2158 Male, age 61, both hemispheres 283.4
2324 Male, age 76, both hemispheres 227.5
2008 Male, age 80, left hemisphere 209.2
2367 Female, age 91, left hemisphere 178.5
Reticular pontine nucleus, caudal
nTPM: 186.9
2332 Male, age 80, right hemisphere 208.2
2092 Male, age 76, both hemispheres 196.0
2457 Female, age 91, both hemispheres 172.4
2559 Male, age 74, both hemispheres 170.9
Reticular pontine nucleus, oral
nTPM: 187.2
2361 Male, age 74, both hemispheres 253.2
2012 Female, age 85, both hemispheres 197.0
2366 Female, age 91, both hemispheres 196.3
1939 Male, age 80, both hemispheres 144.8
2167 Male, age 76, both hemispheres 144.7
Reticulotegmental nucleus
nTPM: 150.8
2325 Male, age 76, both hemispheres 168.9
2322 Female, age 91, both hemispheres 158.2
2333 Male, age 80, both hemispheres 140.9
2452 Male, age 74, both hemispheres 135.3
Spinal trigeminal nucleus, caudal
nTPM: 189.7
2390 Female, age 91, both hemispheres 360.2
2642 Male, age 74, both hemispheres 173.4
2447 Male, age 76, both hemispheres 168.9
2308 Male, age 80, both hemispheres 132.0
2312 Male, age 61, both hemispheres 114.1
Spinal trigeminal nucleus, interpolar
nTPM: 253.6
2625 Male, age 61, both hemispheres 587.2
2066 Male, age 76, right hemisphere 183.1
2033 Male, age 80, both hemispheres 175.2
2389 Female, age 91, both hemispheres 172.7
2386 Female, age 85, both hemispheres 149.7
Spinal trigeminal nucleus, oral
nTPM: 206.3
2164 Male, age 80, both hemispheres 276.4
2737 Female, age 85, both hemispheres 209.6
1978 Male, age 76, both hemispheres 133.0
Spinal vestibular nucleus
nTPM: 148.2
2780 Male, age 80, both hemispheres 180.3
2186 Female, age 91, both hemispheres 178.6
2806 Female, age 85, both hemispheres 155.2
2748 Male, age 76, both hemispheres 141.9
2796 Male, age 61, both hemispheres 127.3
2384 Male, age 74, both hemispheres 106.2
Subcoeruleus area
nTPM: 154.1
1958 Male, age 80, both hemispheres 182.8
2089 Male, age 76, left hemisphere 174.7
2369 Female, age 85, left hemisphere 153.1
2323 Female, age 91, left hemisphere 151.8
2451 Male, age 74, both hemispheres 108.0
Superior olive
nTPM: 193.3
1875 Female, age 85, both hemispheres 253.1
2020 Male, age 76, both hemispheres 186.0
2329 Male, age 80, right hemisphere 180.9
2364 Male, age 74, right hemisphere 174.3
2561 Female, age 91, both hemispheres 172.5
Superior vestibular nucleus
nTPM: 154.9
2015 Male, age 80, both hemispheres 183.7
2383 Male, age 74, both hemispheres 146.4
2061 Male, age 76, both hemispheres 134.5
Ventral medullary reticular nucleus
nTPM: 107.4
2060 Male, age 76, both hemispheres 132.0
2372 Male, age 61, both hemispheres 82.7
Ventral periolivary nuclei
nTPM: 192.2
2165 Male, age 80, both hemispheres 227.6
2130 Female, age 85, both hemispheres 210.9
2023 Male, age 76, both hemispheres 167.5
2794 Female, age 91, left hemisphere 162.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 149.9
2741 Female, age 85, both hemispheres 192.6
1986 Male, age 76, both hemispheres 183.8
2118 Male, age 80, both hemispheres 129.5
2180 Male, age 61, both hemispheres 127.3
2302 Female, age 91, both hemispheres 116.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 173.4
2449 Male, age 74, both hemispheres 223.1
2840 Female, age 85, both hemispheres 205.8
1959 Male, age 76, both hemispheres 192.1
2161 Male, age 80, both hemispheres 179.2
2359 Male, age 61, both hemispheres 127.5
2456 Female, age 91, both hemispheres 112.6

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 313.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 240.1
FF:10182-103D2 60 years, female 278.2
FF:10165-103B3 76 years, female 202.0
Medulla oblongata
Scaled Tags Per Million: 173.7
FF:10155-103A2 76 years, female 196.7
FF:10038-101F2 18-64 years, mixed 186.5
FF:10174-103C3 60 years, female 137.9
Pons
Scaled Tags Per Million: 313.6
FF:10033-101E6 18-54 years, mixed 313.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 142.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 132.3
Samples: 4

Max nTPM: 165.3
Min nTPM: 89.6
Sample A Female 165.3
Sample B Female 137.3
Sample C Male 137.1
Sample D Male 89.6
Pons
nTPM: 142.8
Samples: 4

Max nTPM: 184.7
Min nTPM: 92.8
Sample A Female 184.7
Sample B Female 92.8
Sample C Male 124.4
Sample D Male 169.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 200.0
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 200.0
Samples: 4

Max nTPM: 211.5
Min nTPM: 183.2
Sample A Male 197.9
Sample B Male 211.5
Sample C Female 183.2
Sample D Female 207.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 16.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 16.6
72283605 Antisense, RP_051019_01_G02, Mouse strain C57BL/6J (56 days, male) 16.6
Pons
Expression energy: 15.6
72283605 Antisense, RP_051019_01_G02, Mouse strain C57BL/6J (56 days, male) 15.6

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