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MAPRE3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:117.9 nTPM
FANTOM5:360.8 Scaled Tags Per Million
Pig:182.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA009263
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 117.9
Samples: 246

Max nTPM: 244.7
Min nTPM: 49.4
Std nTPM: 35.7
Median nTPM: 117.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 244.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 202.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 191.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 190.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 186.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 185.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 181.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 180.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 176.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 176.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 175.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 175.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 174.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 174.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 174.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 173.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 172.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 170.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 170.5
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 169.7
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 169.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 168.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 168.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 168.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 166.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 165.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 165.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 163.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 162.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 162.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 161.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 161.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 161.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 160.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 160.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 159.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 158.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 158.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 155.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 154.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 153.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 153.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 153.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 153.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 152.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 152.1
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 151.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 151.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 150.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 149.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 148.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 148.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 147.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 146.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 146.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 146.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 146.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 145.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 145.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 145.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 144.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 143.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 142.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 141.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 141.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 140.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 139.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 139.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 138.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 138.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 137.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 134.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 134.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 134.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 134.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 134.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 133.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 133.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 133.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 132.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 132.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 132.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 132.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 132.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 131.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 131.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 131.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 131.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 131.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 130.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 129.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 129.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 129.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 129.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 128.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 128.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 127.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 127.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 127.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 127.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 127.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 127.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 127.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 127.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 127.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 126.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 126.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 126.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 125.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 125.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 123.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 123.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 120.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 120.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 120.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 119.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 119.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 118.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 117.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 117.4
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 116.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 116.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 115.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 115.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 115.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 113.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 113.6
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 113.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 112.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 111.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 111.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 111.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 111.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 111.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 111.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 110.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 110.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 110.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 110.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 109.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 109.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 108.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 108.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 108.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 108.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 108.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 107.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 106.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 106.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 105.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 105.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 104.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 104.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 104.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 104.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 103.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 102.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 102.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 101.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 101.0
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 100.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 99.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 99.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 97.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 96.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 95.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 95.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 94.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 93.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 93.7
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 91.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 90.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 90.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 89.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 89.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 89.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 88.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 88.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 88.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 86.9
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 86.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 86.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 85.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 84.8
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 84.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 83.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 83.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 83.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 82.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 82.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 81.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 80.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 80.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 80.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 79.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 79.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 79.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 78.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 78.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 77.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 77.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 77.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 75.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 75.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 73.6
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 73.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 73.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 73.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 72.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 71.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 71.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 71.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 71.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 71.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 70.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 70.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 70.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 69.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 69.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 68.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 68.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 67.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 67.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 66.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 66.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 64.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 64.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 63.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 61.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 57.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 56.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 56.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 56.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 51.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 49.9
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

360.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 360.8
FF:10164-103B2 76 years, female 360.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

182.6
Pig sample Sample description nTPM
Caudate
nTPM: 182.7
Samples: 4

Max nTPM: 225.0
Min nTPM: 156.5
Sample A Female 156.5
Sample B Female 187.4
Sample C Male 225.0
Sample D Male 161.7

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