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MRPL28
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  • MRPL28
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:90.1 nTPM
FANTOM5:20.2 Scaled Tags Per Million
Pig:50.4 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030594Antibody HPA055589Antibody CAB033542
Glial cells Not detectedMediumLow
Neuronal cells MediumMediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

90.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 90.1
Samples: 246

Max nTPM: 209.3
Min nTPM: 40.1
Std nTPM: 29.4
Median nTPM: 84.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 209.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 187.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 184.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 178.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 178.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 171.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 168.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 160.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 154.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 153.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 150.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 150.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 148.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 145.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 143.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 142.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 141.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 141.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 138.0
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 137.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 135.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 135.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 134.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 134.2
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 133.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 129.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 128.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 127.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 125.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 125.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 123.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 123.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 123.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 123.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 121.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 120.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 119.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 118.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 118.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 117.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 116.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 115.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 114.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 114.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 114.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 113.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 113.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 112.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 111.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 109.8
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 108.1
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 107.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 106.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 106.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 106.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 104.3
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 103.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 103.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 102.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 102.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 102.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 102.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 101.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 101.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 101.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 101.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 101.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 100.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 99.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 98.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 98.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 97.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 97.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 97.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 97.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 96.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 96.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 96.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 95.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 95.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 95.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 95.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 95.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 94.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 94.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 94.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 94.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 93.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 93.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 92.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.3
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 92.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 92.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 91.7
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 91.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 91.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 91.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 91.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 90.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 90.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 90.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 90.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 89.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 89.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 89.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 89.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 89.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 88.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 88.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 88.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 87.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 87.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 87.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 87.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 86.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 86.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 85.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 85.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 85.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 85.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 85.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 84.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 84.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 84.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 84.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 84.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 84.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 84.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 84.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 83.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 83.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 82.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 82.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 82.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 82.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 81.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 81.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 80.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 80.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 79.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 79.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 78.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 78.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 78.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 78.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 77.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 77.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 77.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 77.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 77.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 77.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 76.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 76.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 76.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 76.3
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 76.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 75.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 75.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 75.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 74.3
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 74.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 74.1
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 74.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 74.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 73.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 73.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 73.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 73.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 73.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 73.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 73.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 73.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 73.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 71.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 71.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 71.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 70.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 70.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 70.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 70.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 69.6
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 69.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 69.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 69.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 68.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 68.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 68.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 68.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 67.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 67.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 67.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 67.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 67.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 67.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 67.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 67.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 66.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 66.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 65.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 65.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 65.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 65.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 64.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 64.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 63.7
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 63.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 63.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 62.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 62.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 61.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 61.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 61.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 61.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 60.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 59.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 58.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 58.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 58.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 57.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 57.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 55.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 55.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 55.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 54.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 53.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 52.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 52.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 51.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 51.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 51.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 51.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 50.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 50.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 49.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 49.2
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 49.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 48.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 47.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 45.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 43.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 42.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 40.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

20.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 20.2
FF:10164-103B2 76 years, female 20.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

50.4
Pig sample Sample description nTPM
Caudate
nTPM: 50.4
Samples: 4

Max nTPM: 58.3
Min nTPM: 42.6
Sample A Female 42.9
Sample B Female 58.3
Sample C Male 57.8
Sample D Male 42.6

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