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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:127.6 nTPM
FANTOM5:212.4 Scaled Tags Per Million
Pig:72.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA030501Antibody HPA045621
Glial cells Not detectedLow
Neuronal cells LowMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

127.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 127.6
Samples: 246

Max nTPM: 230.3
Min nTPM: 58.3
Std nTPM: 30.4
Median nTPM: 126.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 230.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 229.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 225.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 220.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 204.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 202.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 200.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 198.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 191.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 188.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 188.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 182.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 180.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 179.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 178.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 177.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 175.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 175.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 172.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 169.5
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 168.9
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 164.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 162.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 161.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 160.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 160.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 160.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 159.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 157.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 155.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 155.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 155.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 154.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 154.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 154.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 154.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 153.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 152.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 152.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 152.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 152.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 152.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 151.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 151.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 151.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 150.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 149.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 149.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 149.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 149.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 149.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 148.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 148.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 148.1
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 147.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 147.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 147.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 146.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 146.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 145.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 145.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 144.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 144.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 143.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 143.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 142.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 142.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 141.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 141.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 141.5
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 141.2
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 141.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 139.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 139.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 139.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 138.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 138.3
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 138.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 137.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 137.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 137.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 137.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 136.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 135.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 135.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 135.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 135.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 135.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 135.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 134.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 134.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 134.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 134.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 133.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 133.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 133.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 133.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 132.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 132.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 132.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 131.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 131.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 131.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 131.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 131.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 130.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 130.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 130.6
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 130.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 129.8
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 129.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 128.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 128.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 128.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 128.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 128.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 127.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 127.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 127.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 127.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 127.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 127.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 126.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 126.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 126.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 126.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 126.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 126.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 125.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 125.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 125.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 125.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 124.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 124.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 124.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 123.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 123.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 123.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 123.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 123.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 122.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 122.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 122.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 122.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 121.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 121.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 120.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 119.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 119.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 119.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 119.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 118.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 117.8
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 117.2
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 117.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 117.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 115.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 115.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 115.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 115.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 115.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 114.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 114.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 113.6
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 113.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 113.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 113.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 112.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 112.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 112.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 112.0
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 111.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 111.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 111.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 111.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 111.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 111.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 110.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 110.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 109.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 109.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 109.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 109.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 109.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 108.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 107.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 106.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 106.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 105.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 105.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 104.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 104.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 104.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 103.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 103.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 103.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 99.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 99.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 98.8
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 98.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 98.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 98.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 97.9
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 97.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 97.5
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 97.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 97.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 96.6
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 96.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 93.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 93.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 91.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 91.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 89.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 89.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 88.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 88.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 87.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 87.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 85.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 85.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 85.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 83.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 82.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 81.5
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 81.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 80.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 80.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 79.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 77.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 76.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 76.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 76.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 75.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 74.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 74.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 74.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 71.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 68.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 64.5
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 58.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

212.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 212.4
FF:10164-103B2 76 years, female 212.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

72.3
Pig sample Sample description nTPM
Caudate
nTPM: 72.3
Samples: 4

Max nTPM: 81.6
Min nTPM: 61.1
Sample A Female 68.1
Sample B Female 81.6
Sample C Male 78.3
Sample D Male 61.1

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