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NDUFB2
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  • NDUFB2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:337.4 nTPM
FANTOM5:82.4 Scaled Tags Per Million
Pig:40.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051377
Glial cells Medium
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

337.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 337.4
Samples: 246

Max nTPM: 868.6
Min nTPM: 173.8
Std nTPM: 107.1
Median nTPM: 311.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 868.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 859.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 797.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 766.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 643.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 638.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 637.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 626.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 616.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 570.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 569.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 563.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 534.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 529.4
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 523.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 515.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 510.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 488.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 487.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 479.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 471.4
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 466.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 463.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 461.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 453.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 451.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 446.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 442.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 442.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 442.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 436.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 435.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 433.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 431.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 428.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 425.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 424.6
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 416.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 415.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 413.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 407.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 406.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 401.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 401.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 399.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 398.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 398.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 397.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 397.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 394.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 389.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 388.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 384.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 382.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 382.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 379.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 379.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 378.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 377.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 373.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 372.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 371.4
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 371.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 368.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 366.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 364.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 364.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 362.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 361.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 360.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 360.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 359.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 358.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 357.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 354.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 354.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 347.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 347.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 347.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 346.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 345.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 344.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 344.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 344.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 343.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 341.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 341.3
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 341.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 340.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 339.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 337.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 335.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 334.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 334.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 333.5
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 332.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 331.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 331.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 329.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 327.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 327.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 324.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 324.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 322.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 322.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 322.4
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 322.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 322.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 321.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 321.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 320.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 319.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 318.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 318.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 316.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 315.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 315.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 315.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 314.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 313.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 312.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 312.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 311.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 311.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 310.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 309.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 308.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 308.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 307.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 307.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 307.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 304.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 304.2
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 303.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 303.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 303.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 302.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 302.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 302.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 302.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 301.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 301.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 300.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 300.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 300.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 300.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 299.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 298.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 298.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 297.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 297.6
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 296.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 296.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 295.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 295.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 295.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 295.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 295.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 294.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 294.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 294.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 293.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 292.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 292.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 290.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 290.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 289.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 289.7
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 289.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 289.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 287.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 286.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 285.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 284.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 284.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 282.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 282.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 281.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 280.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 279.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 279.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 278.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 277.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 275.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 275.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 274.2
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 273.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 273.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 272.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 271.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 270.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 268.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 268.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 267.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 266.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 264.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 262.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 261.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 261.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 259.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 259.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 258.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 257.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 255.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 254.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 253.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 252.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 251.5
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 250.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 249.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 249.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 248.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 245.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 244.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 243.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 243.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 243.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 242.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 240.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 239.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 233.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 233.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 231.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 231.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 231.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 230.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 228.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 228.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 223.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 222.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 221.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 221.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 219.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 217.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 217.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 215.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 215.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 213.1
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 212.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 204.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 196.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 193.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 192.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 192.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 185.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 173.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

82.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 82.4
FF:10164-103B2 76 years, female 82.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

40.2
Pig sample Sample description nTPM
Caudate
nTPM: 40.2
Samples: 4

Max nTPM: 41.9
Min nTPM: 38.7
Sample A Female 39.0
Sample B Female 41.2
Sample C Male 38.7
Sample D Male 41.9

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