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SLC22A17
HPA
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  • SLC22A17
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:206.3 nTPM
FANTOM5:464.1 Scaled Tags Per Million
Pig:517.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA002728
Glial cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

206.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 206.3
Samples: 246

Max nTPM: 420.3
Min nTPM: 65.4
Std nTPM: 78.0
Median nTPM: 201.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 420.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 402.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 391.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 389.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 387.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 377.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 352.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 348.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 342.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 337.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 337.1
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 333.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 332.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 332.2
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 331.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 330.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 328.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 327.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 325.2
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 324.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 323.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 322.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 317.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 316.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 315.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 314.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 313.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 310.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 306.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 305.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 304.0
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 300.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 300.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 300.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 298.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 298.4
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 296.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 296.7
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 294.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 293.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 292.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 292.0
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 291.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 289.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 286.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 284.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 282.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 280.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 280.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 278.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 277.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 275.3
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 273.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 272.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 272.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 272.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 271.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 270.9
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 268.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 265.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 265.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 264.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 264.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 263.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 261.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 261.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 260.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 257.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 255.8
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 255.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 254.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 251.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 251.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 250.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 249.5
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 247.9
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 247.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 246.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 246.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 245.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 244.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 244.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 243.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 240.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 239.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 236.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 236.7
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 236.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 235.4
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 234.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 233.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 232.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 230.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 230.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 230.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 228.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 228.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 228.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 227.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 226.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 223.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 221.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 220.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 220.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 217.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 217.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 217.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 216.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 216.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 214.6
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 214.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 212.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 211.8
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 210.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 210.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 208.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 208.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 205.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 203.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 202.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 202.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 201.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 201.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 201.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 200.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 197.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 195.0
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 193.0
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 190.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 189.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 187.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 187.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 186.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 186.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 186.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 186.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 186.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 185.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 183.9
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 183.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 182.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 182.0
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 182.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 180.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 180.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 179.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 179.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 179.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 178.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 177.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 174.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 173.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 172.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 172.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 171.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 170.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 169.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 169.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 168.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 168.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 168.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 167.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 166.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 165.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 165.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 162.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 161.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 159.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 158.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 158.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 157.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 155.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 154.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 153.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 151.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 149.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 148.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 148.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 147.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 145.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 144.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 143.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 142.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 142.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 141.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 140.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 139.4
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 138.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 138.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 138.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 137.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 136.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 136.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 133.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 132.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 130.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 125.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 125.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 124.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 123.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 123.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 123.2
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 122.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 122.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 122.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 120.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 117.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 115.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 115.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 114.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 113.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 113.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 113.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 112.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 112.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 112.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 111.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 111.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 111.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 109.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 108.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 108.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 108.2
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 106.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 105.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 104.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 103.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 102.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 100.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 100.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 97.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 95.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 94.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 92.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 90.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 89.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 88.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 87.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 87.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 84.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 82.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 80.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 79.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 74.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 73.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 65.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

464.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 464.1
FF:10164-103B2 76 years, female 464.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

517.2
Pig sample Sample description nTPM
Caudate
nTPM: 517.2
Samples: 4

Max nTPM: 593.0
Min nTPM: 448.5
Sample A Female 457.3
Sample B Female 570.1
Sample C Male 593.0
Sample D Male 448.5

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