PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:247.4 nTPM
FANTOM5:26.0 Scaled Tags Per Million
Pig:116.0 nTPM
Mouse:121.5 nTPM
Allen mouse:12.5 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 247.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 203.6
2301 Female, age 85, both hemispheres 284.8
1984 Male, age 76, both hemispheres 197.0
2090 Male, age 80, both hemispheres 175.5
2188 Female, age 91, both hemispheres 157.3
Area postrema
nTPM: 99.9
2306 Male, age 80, both hemispheres 152.3
2054 Male, age 76, both hemispheres 94.9
2799 Male, age 61, both hemispheres 52.5
Dorsal cochlear nucleus
nTPM: 207.2
2802 Male, age 74, right hemisphere 259.3
2378 Male, age 80, both hemispheres 207.0
2370 Male, age 61, both hemispheres 197.2
2187 Female, age 91, both hemispheres 190.4
2058 Male, age 76, both hemispheres 182.1
Dorsal medullary reticular nucleus
nTPM: 230.9
2088 Male, age 76, both hemispheres 247.2
2040 Female, age 85, both hemispheres 237.1
2373 Male, age 61, both hemispheres 208.5
Dorsal motor vagal complex
nTPM: 142.5
2185 Male, age 76, both hemispheres 196.5
2000 Male, age 74, unknown 186.0
2133 Female, age 91, both hemispheres 177.5
2643 Male, age 74, both hemispheres 139.4
2844 Male, age 55, unknown 130.2
2797 Male, age 61, both hemispheres 119.2
2807 Female, age 85, both hemispheres 108.8
2813 Female, age 72, unknown 82.7
Dorsal tegmental nucleus
nTPM: 191.1
2083 Male, age 80, both hemispheres 266.6
2326 Male, age 74, both hemispheres 196.2
1936 Male, age 76, left hemisphere 170.5
2358 Male, age 61, both hemispheres 131.3
Dorsolateral tegmental area
nTPM: 180.5
2654 Male, age 80, both hemispheres 241.5
2751 Female, age 85, both hemispheres 225.9
2337 Male, age 61, both hemispheres 171.0
2141 Male, age 76, both hemispheres 143.0
2360 Male, age 74, both hemispheres 121.3
Gigantocellular reticular nuclei, medullary
nTPM: 224.2
2462 Male, age 74, both hemispheres 272.9
2310 Male, age 80, both hemispheres 241.8
2314 Male, age 61, both hemispheres 220.6
2387 Female, age 91, both hemispheres 216.5
2022 Male, age 76, right hemisphere 201.7
1876 Female, age 85, both hemispheres 191.4
Gigantocellular reticular nuclei, pars
nTPM: 220.2
2084 Female, age 85, both hemispheres 251.8
2168 Male, age 76, both hemispheres 237.2
2336 Male, age 61, both hemispheres 220.3
2330 Male, age 80, both hemispheres 201.5
2706 Male, age 80, both hemispheres 190.2
Inferior olive
nTPM: 154.3
2628 Female, age 91, both hemispheres 184.2
2178 Male, age 61, both hemispheres 171.1
2563 Male, age 74, both hemispheres 156.8
2085 Female, age 85, both hemispheres 152.0
2379 Male, age 80, both hemispheres 107.5
Kolliker-Fuse nucleus
nTPM: 176.2
2793 Female, age 91, left hemisphere 227.1
2163 Male, age 80, both hemispheres 199.1
2315 Male, age 76, right hemisphere 102.5
Lateral lemniscal nuclei
nTPM: 243.1
2453 Male, age 74, right hemisphere 283.6
2320 Female, age 91, left hemisphere 256.3
2169 Male, age 76, both hemispheres 243.4
2036 Male, age 80, both hemispheres 234.2
2746 Female, age 85, left hemisphere 197.7
Lateral medullary reticular nucleus
nTPM: 173.9
2044 Male, age 76, both hemispheres 209.8
2852 Male, age 80, both hemispheres 191.2
2305 Male, age 74, both hemispheres 189.0
2190 Female, age 85, both hemispheres 175.3
2374 Male, age 61, both hemispheres 155.4
2804 Female, age 91, both hemispheres 123.0
Lateral parabrachial nucleus
nTPM: 169.3
2139 Female, age 85, right hemisphere 202.6
2790 Male, age 61, both hemispheres 201.6
2013 Male, age 80, both hemispheres 168.5
2792 Male, age 76, both hemispheres 104.4
Lateral vestibular nucleus
nTPM: 220.6
2184 Male, age 76, both hemispheres 228.7
2311 Male, age 80, both hemispheres 212.5
Locus coeruleus
nTPM: 133.2
2123 Female, age 91, both hemispheres 172.6
2162 Male, age 80, both hemispheres 162.7
2720 Male, age 74, both hemispheres 150.5
2317 Female, age 72, unknown 135.0
2014 Male, age 55, unknown 116.4
1980 Male, age 76, both hemispheres 111.5
2788 Male, age 74, unknown 83.6
Medial olivary nucleus
nTPM: 133.0
2851 Male, age 80, both hemispheres 153.9
1962 Male, age 76, both hemispheres 151.4
1943 Male, age 61, both hemispheres 139.4
2138 Female, age 91, both hemispheres 87.4
Medial parabrachial nucleus
nTPM: 211.0
2156 Male, age 61, both hemispheres 227.4
2786 Male, age 76, both hemispheres 217.7
2463 Female, age 85, right hemisphere 213.0
2170 Female, age 91, both hemispheres 207.2
2854 Male, age 80, both hemispheres 189.6
Medial periolivary nuclei
nTPM: 211.1
2171 Female, age 85, both hemispheres 244.6
2458 Female, age 91, both hemispheres 228.8
2063 Male, age 76, both hemispheres 219.4
2081 Male, age 80, both hemispheres 184.1
2791 Male, age 74, right hemisphere 178.8
Medial vestibular nucleus
nTPM: 223.9
2093 Male, age 80, both hemispheres 286.4
2624 Male, age 61, both hemispheres 254.3
2801 Male, age 74, both hemispheres 243.1
2803 Female, age 91, both hemispheres 195.5
2743 Female, age 85, both hemispheres 190.3
2134 Male, age 76, both hemispheres 173.5
Motor facial nucleus
nTPM: 228.8
2062 Male, age 76, both hemispheres 253.3
2795 Female, age 91, both hemispheres 246.6
2126 Male, age 61, both hemispheres 232.6
2327 Male, age 80, both hemispheres 229.0
2365 Male, age 74, right hemisphere 223.6
2697 Female, age 85, both hemispheres 188.0
Motor hypoglossal nucleus
nTPM: 200.8
2132 Female, age 85, both hemispheres 272.5
2125 Female, age 91, both hemispheres 258.8
2182 Male, age 80, both hemispheres 233.8
2461 Male, age 61, both hemispheres 140.6
2277 Male, age 76, both hemispheres 98.1
Motor trigeminal nucleus
nTPM: 221.8
2560 Male, age 74, both hemispheres 300.1
2321 Female, age 91, both hemispheres 252.2
2335 Male, age 61, both hemispheres 188.9
2309 Male, age 76, both hemispheres 187.4
2079 Male, age 80, both hemispheres 180.6
Nuclei of the trapezoid body
nTPM: 236.4
2368 Female, age 91, both hemispheres 259.0
1983 Male, age 76, both hemispheres 244.7
2159 Male, age 61, both hemispheres 235.9
2735 Female, age 85, both hemispheres 233.4
2166 Male, age 80, both hemispheres 209.2
Nucleus ambiguus
nTPM: 227.9
2096 Female, age 85, both hemispheres 328.7
2071 Male, age 76, both hemispheres 127.2
Nucleus cuneatus
nTPM: 238.7
2100 Male, age 76, both hemispheres 349.4
2131 Male, age 76, both hemispheres 325.4
2564 Male, age 74, both hemispheres 289.5
2376 Male, age 61, both hemispheres 229.2
2381 Male, age 80, both hemispheres 213.0
2805 Female, age 91, both hemispheres 191.4
2380 Male, age 80, both hemispheres 187.8
2808 Female, age 85, both hemispheres 186.3
2562 Male, age 61, both hemispheres 176.0
Nucleus gracilis
nTPM: 200.5
2382 Male, age 80, both hemispheres 208.4
2627 Male, age 74, both hemispheres 206.6
2299 Female, age 85, both hemispheres 186.4
Nucleus raphe magnus
nTPM: 238.0
2455 Male, age 74, both hemispheres 255.0
2172 Female, age 85, both hemispheres 247.1
2459 Female, age 91, both hemispheres 246.5
2328 Male, age 80, both hemispheres 245.9
2051 Male, age 76, both hemispheres 217.5
2160 Male, age 61, both hemispheres 215.8
Nucleus raphe obscurus
nTPM: 173.3
2800 Male, age 61, midline 201.4
2845 Female, age 85, midline 188.6
2142 Male, age 76, midline 130.0
Nucleus raphe pallidus
nTPM: 180.2
2183 Male, age 80, midline 210.7
1924 Male, age 61, midline 169.8
2145 Male, age 76, midline 160.1
Nucleus tractus solitarii
nTPM: 103.0
2307 Male, age 80, both hemispheres 112.0
2656 Male, age 76, both hemispheres 105.0
2144 Female, age 91, right hemisphere 98.2
2191 Female, age 85, both hemispheres 96.9
Paramedian reticular nucleus
nTPM: 192.0
2057 Male, age 80, both hemispheres 217.8
2050 Female, age 85, both hemispheres 213.9
2313 Male, age 61, both hemispheres 211.8
2052 Male, age 76, both hemispheres 124.4
Parvicellular reticular nuclei
nTPM: 231.1
2558 Male, age 74, both hemispheres 306.2
2095 Male, age 76, both hemispheres 194.5
2119 Male, age 80, both hemispheres 192.6
Parvicellular reticular nuclei, medullary
nTPM: 210.0
2091 Female, age 85, both hemispheres 244.6
2189 Female, age 91, both hemispheres 193.0
2181 Male, age 80, left hemisphere 192.4
Pedunculopontine tegmental nucleus
nTPM: 149.8
2334 Male, age 80, both hemispheres 173.2
1921 Female, age 85, both hemispheres 153.4
2338 Male, age 61, both hemispheres 122.7
Peritrigeminal nucleus
nTPM: 207.7
2179 Male, age 61, both hemispheres 212.8
2067 Female, age 85, both hemispheres 208.7
2136 Male, age 76, both hemispheres 201.5
Pontine nuclei
nTPM: 228.3
2787 Female, age 85, both hemispheres 278.9
1968 Male, age 76, left hemisphere 260.4
2115 Male, age 80, left hemisphere 237.1
2454 Male, age 74, left hemisphere 224.0
1863 Male, age 55, unknown 223.3
2109 Female, age 72, unknown 222.2
2727 Male, age 61, right hemisphere 204.2
2319 Female, age 91, both hemispheres 176.6
Pontine raphe nucleus
nTPM: 145.5
2122 Female, age 85, midline 166.7
2853 Male, age 76, midline 124.4
Posteroventral cochlear nucleus
nTPM: 168.0
2341 Male, age 80, both hemispheres 204.8
2752 Female, age 85, both hemispheres 197.6
2070 Male, age 76, both hemispheres 178.9
2371 Male, age 61, both hemispheres 160.6
2135 Female, age 91, both hemispheres 97.9
Prepositus hypoglossal nucleus
nTPM: 196.2
2855 Female, age 85, right hemisphere 215.9
2086 Male, age 80, both hemispheres 176.5
Principal sensory trigeminal nucleus
nTPM: 206.9
2158 Male, age 61, both hemispheres 230.2
2324 Male, age 76, both hemispheres 207.1
2008 Male, age 80, left hemisphere 195.3
2367 Female, age 91, left hemisphere 195.0
Reticular pontine nucleus, caudal
nTPM: 247.4
2457 Female, age 91, both hemispheres 277.7
2559 Male, age 74, both hemispheres 253.5
2332 Male, age 80, right hemisphere 247.2
2092 Male, age 76, both hemispheres 211.3
Reticular pontine nucleus, oral
nTPM: 205.5
2361 Male, age 74, both hemispheres 243.3
1939 Male, age 80, both hemispheres 214.7
2012 Female, age 85, both hemispheres 201.0
2366 Female, age 91, both hemispheres 187.9
2167 Male, age 76, both hemispheres 180.3
Reticulotegmental nucleus
nTPM: 241.9
2452 Male, age 74, both hemispheres 301.4
2322 Female, age 91, both hemispheres 246.7
2333 Male, age 80, both hemispheres 243.6
2325 Male, age 76, both hemispheres 175.9
Spinal trigeminal nucleus, caudal
nTPM: 209.2
2447 Male, age 76, both hemispheres 291.3
2390 Female, age 91, both hemispheres 209.8
2308 Male, age 80, both hemispheres 209.7
2312 Male, age 61, both hemispheres 184.2
2642 Male, age 74, both hemispheres 151.1
Spinal trigeminal nucleus, interpolar
nTPM: 191.8
2066 Male, age 76, right hemisphere 220.3
2389 Female, age 91, both hemispheres 202.7
2033 Male, age 80, both hemispheres 196.2
2625 Male, age 61, both hemispheres 179.8
2386 Female, age 85, both hemispheres 160.1
Spinal trigeminal nucleus, oral
nTPM: 212.6
2164 Male, age 80, both hemispheres 258.1
2737 Female, age 85, both hemispheres 204.9
1978 Male, age 76, both hemispheres 174.9
Spinal vestibular nucleus
nTPM: 229.4
2748 Male, age 76, both hemispheres 259.2
2384 Male, age 74, both hemispheres 252.6
2780 Male, age 80, both hemispheres 246.7
2186 Female, age 91, both hemispheres 229.9
2806 Female, age 85, both hemispheres 204.8
2796 Male, age 61, both hemispheres 183.1
Subcoeruleus area
nTPM: 195.4
2369 Female, age 85, left hemisphere 213.4
2451 Male, age 74, both hemispheres 209.3
2089 Male, age 76, left hemisphere 207.5
1958 Male, age 80, both hemispheres 180.1
2323 Female, age 91, left hemisphere 166.6
Superior olive
nTPM: 221.8
2561 Female, age 91, both hemispheres 274.2
2329 Male, age 80, right hemisphere 258.2
2020 Male, age 76, both hemispheres 203.8
1875 Female, age 85, both hemispheres 188.6
2364 Male, age 74, right hemisphere 184.2
Superior vestibular nucleus
nTPM: 148.6
2015 Male, age 80, both hemispheres 181.9
2061 Male, age 76, both hemispheres 165.5
2383 Male, age 74, both hemispheres 98.4
Ventral medullary reticular nucleus
nTPM: 209.1
2060 Male, age 76, both hemispheres 250.2
2372 Male, age 61, both hemispheres 168.0
Ventral periolivary nuclei
nTPM: 207.7
2165 Male, age 80, both hemispheres 233.1
2794 Female, age 91, left hemisphere 208.3
2130 Female, age 85, both hemispheres 204.4
2023 Male, age 76, both hemispheres 185.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 188.9
1986 Male, age 76, both hemispheres 218.2
2741 Female, age 85, both hemispheres 209.4
2118 Male, age 80, both hemispheres 187.7
2180 Male, age 61, both hemispheres 172.3
2302 Female, age 91, both hemispheres 156.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 212.9
2456 Female, age 91, both hemispheres 267.2
2449 Male, age 74, both hemispheres 257.5
2161 Male, age 80, both hemispheres 208.6
1959 Male, age 76, both hemispheres 203.7
2840 Female, age 85, both hemispheres 189.7
2359 Male, age 61, both hemispheres 150.5

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 26.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 26.0
FF:10182-103D2 60 years, female 34.7
FF:10165-103B3 76 years, female 17.3
Medulla oblongata
Scaled Tags Per Million: 14.5
FF:10038-101F2 18-64 years, mixed 22.2
FF:10155-103A2 76 years, female 13.5
FF:10174-103C3 60 years, female 7.9
Pons
Scaled Tags Per Million: 23.4
FF:10033-101E6 18-54 years, mixed 23.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 116.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 116.1
Samples: 4

Max nTPM: 137.7
Min nTPM: 70.7
Sample A Female 120.9
Sample B Female 134.9
Sample C Male 137.7
Sample D Male 70.7
Pons
nTPM: 100.8
Samples: 4

Max nTPM: 123.3
Min nTPM: 74.5
Sample A Female 116.4
Sample B Female 74.5
Sample C Male 88.8
Sample D Male 123.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 121.5
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 121.5
Samples: 4

Max nTPM: 122.7
Min nTPM: 120.8
Sample A Male 121.3
Sample B Male 120.8
Sample C Female 122.7
Sample D Female 121.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 12.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 12.5
73512185 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 12.5
70723465 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 11.5
Pons
Expression energy: 9.4
73512185 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 9.4
70723465 Antisense, RP_050705_01_B04, Mouse strain C57BL/6J (56 days, male) 8.3

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