PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:107.0 nTPM
FANTOM5:84.2 Scaled Tags Per Million
Pig:14.5 nTPM
Mouse:11.8 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 107.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 74.8
1984 Male, age 76, both hemispheres 101.0
2090 Male, age 80, both hemispheres 67.1
2188 Female, age 91, both hemispheres 66.9
2301 Female, age 85, both hemispheres 64.1
Area postrema
nTPM: 107.0
2799 Male, age 61, both hemispheres 122.1
2306 Male, age 80, both hemispheres 109.3
2054 Male, age 76, both hemispheres 89.5
Dorsal cochlear nucleus
nTPM: 77.1
2378 Male, age 80, both hemispheres 90.0
2802 Male, age 74, right hemisphere 88.2
2370 Male, age 61, both hemispheres 87.8
2187 Female, age 91, both hemispheres 69.9
2058 Male, age 76, both hemispheres 49.7
Dorsal medullary reticular nucleus
nTPM: 62.9
2088 Male, age 76, both hemispheres 68.0
2373 Male, age 61, both hemispheres 67.1
2040 Female, age 85, both hemispheres 53.4
Dorsal motor vagal complex
nTPM: 80.7
2797 Male, age 61, both hemispheres 113.1
2185 Male, age 76, both hemispheres 102.0
2643 Male, age 74, both hemispheres 97.6
2807 Female, age 85, both hemispheres 80.2
2844 Male, age 55, unknown 69.4
2813 Female, age 72, unknown 65.3
2133 Female, age 91, both hemispheres 63.3
2000 Male, age 74, unknown 54.4
Dorsal tegmental nucleus
nTPM: 75.1
2358 Male, age 61, both hemispheres 86.1
2083 Male, age 80, both hemispheres 80.4
1936 Male, age 76, left hemisphere 71.2
2326 Male, age 74, both hemispheres 62.9
Dorsolateral tegmental area
nTPM: 75.1
2337 Male, age 61, both hemispheres 98.5
2654 Male, age 80, both hemispheres 93.1
2360 Male, age 74, both hemispheres 66.1
2751 Female, age 85, both hemispheres 59.0
2141 Male, age 76, both hemispheres 58.7
Gigantocellular reticular nuclei, medullary
nTPM: 70.5
2314 Male, age 61, both hemispheres 89.5
2310 Male, age 80, both hemispheres 76.8
2022 Male, age 76, right hemisphere 69.7
2387 Female, age 91, both hemispheres 67.6
2462 Male, age 74, both hemispheres 62.9
1876 Female, age 85, both hemispheres 56.4
Gigantocellular reticular nuclei, pars
nTPM: 70.5
2336 Male, age 61, both hemispheres 81.9
2330 Male, age 80, both hemispheres 80.5
2706 Male, age 80, both hemispheres 79.7
2084 Female, age 85, both hemispheres 61.7
2168 Male, age 76, both hemispheres 48.9
Inferior olive
nTPM: 84.6
2379 Male, age 80, both hemispheres 103.1
2628 Female, age 91, both hemispheres 86.2
2178 Male, age 61, both hemispheres 84.4
2563 Male, age 74, both hemispheres 79.6
2085 Female, age 85, both hemispheres 69.8
Kolliker-Fuse nucleus
nTPM: 75.5
2315 Male, age 76, right hemisphere 83.8
2163 Male, age 80, both hemispheres 73.9
2793 Female, age 91, left hemisphere 68.9
Lateral lemniscal nuclei
nTPM: 62.9
2320 Female, age 91, left hemisphere 74.6
2036 Male, age 80, both hemispheres 73.0
2746 Female, age 85, left hemisphere 63.1
2453 Male, age 74, right hemisphere 57.6
2169 Male, age 76, both hemispheres 46.2
Lateral medullary reticular nucleus
nTPM: 75.0
2852 Male, age 80, both hemispheres 96.8
2804 Female, age 91, both hemispheres 85.5
2374 Male, age 61, both hemispheres 68.2
2190 Female, age 85, both hemispheres 67.8
2305 Male, age 74, both hemispheres 66.3
2044 Male, age 76, both hemispheres 65.3
Lateral parabrachial nucleus
nTPM: 74.0
2792 Male, age 76, both hemispheres 83.4
2790 Male, age 61, both hemispheres 79.3
2013 Male, age 80, both hemispheres 67.9
2139 Female, age 85, right hemisphere 65.3
Lateral vestibular nucleus
nTPM: 74.9
2311 Male, age 80, both hemispheres 82.4
2184 Male, age 76, both hemispheres 67.4
Locus coeruleus
nTPM: 60.6
2123 Female, age 91, both hemispheres 86.1
2317 Female, age 72, unknown 65.1
2162 Male, age 80, both hemispheres 63.8
2720 Male, age 74, both hemispheres 58.9
1980 Male, age 76, both hemispheres 57.4
2014 Male, age 55, unknown 52.5
2788 Male, age 74, unknown 40.0
Medial olivary nucleus
nTPM: 71.5
2851 Male, age 80, both hemispheres 80.3
1943 Male, age 61, both hemispheres 75.2
2138 Female, age 91, both hemispheres 67.1
1962 Male, age 76, both hemispheres 63.6
Medial parabrachial nucleus
nTPM: 94.6
2463 Female, age 85, right hemisphere 183.1
2156 Male, age 61, both hemispheres 83.9
2170 Female, age 91, both hemispheres 73.3
2786 Male, age 76, both hemispheres 72.7
2854 Male, age 80, both hemispheres 60.2
Medial periolivary nuclei
nTPM: 57.6
2081 Male, age 80, both hemispheres 71.0
2458 Female, age 91, both hemispheres 62.3
2171 Female, age 85, both hemispheres 56.7
2791 Male, age 74, right hemisphere 54.7
2063 Male, age 76, both hemispheres 43.3
Medial vestibular nucleus
nTPM: 66.4
2624 Male, age 61, both hemispheres 88.3
2743 Female, age 85, both hemispheres 68.0
2803 Female, age 91, both hemispheres 66.2
2801 Male, age 74, both hemispheres 62.3
2093 Male, age 80, both hemispheres 59.7
2134 Male, age 76, both hemispheres 53.9
Motor facial nucleus
nTPM: 60.4
2795 Female, age 91, both hemispheres 79.1
2327 Male, age 80, both hemispheres 64.3
2126 Male, age 61, both hemispheres 63.4
2697 Female, age 85, both hemispheres 62.0
2365 Male, age 74, right hemisphere 51.1
2062 Male, age 76, both hemispheres 42.2
Motor hypoglossal nucleus
nTPM: 69.9
2277 Male, age 76, both hemispheres 94.1
2182 Male, age 80, both hemispheres 82.6
2125 Female, age 91, both hemispheres 66.9
2132 Female, age 85, both hemispheres 54.1
2461 Male, age 61, both hemispheres 51.9
Motor trigeminal nucleus
nTPM: 77.9
2335 Male, age 61, both hemispheres 98.0
2321 Female, age 91, both hemispheres 83.8
2560 Male, age 74, both hemispheres 74.7
2079 Male, age 80, both hemispheres 68.6
2309 Male, age 76, both hemispheres 64.5
Nuclei of the trapezoid body
nTPM: 56.1
2368 Female, age 91, both hemispheres 66.3
2166 Male, age 80, both hemispheres 66.0
2735 Female, age 85, both hemispheres 54.7
2159 Male, age 61, both hemispheres 47.5
1983 Male, age 76, both hemispheres 45.9
Nucleus ambiguus
nTPM: 78.9
2096 Female, age 85, both hemispheres 84.9
2071 Male, age 76, both hemispheres 72.9
Nucleus cuneatus
nTPM: 83.1
2564 Male, age 74, both hemispheres 95.5
2805 Female, age 91, both hemispheres 93.4
2376 Male, age 61, both hemispheres 93.3
2562 Male, age 61, both hemispheres 90.5
2380 Male, age 80, both hemispheres 80.8
2100 Male, age 76, both hemispheres 79.6
2808 Female, age 85, both hemispheres 74.2
2131 Male, age 76, both hemispheres 72.0
2381 Male, age 80, both hemispheres 68.3
Nucleus gracilis
nTPM: 84.2
2299 Female, age 85, both hemispheres 97.0
2382 Male, age 80, both hemispheres 85.0
2627 Male, age 74, both hemispheres 70.5
Nucleus raphe magnus
nTPM: 58.1
2328 Male, age 80, both hemispheres 70.5
2459 Female, age 91, both hemispheres 66.2
2172 Female, age 85, both hemispheres 59.6
2051 Male, age 76, both hemispheres 55.1
2455 Male, age 74, both hemispheres 52.1
2160 Male, age 61, both hemispheres 45.2
Nucleus raphe obscurus
nTPM: 76.0
2142 Male, age 76, midline 93.0
2800 Male, age 61, midline 73.9
2845 Female, age 85, midline 61.1
Nucleus raphe pallidus
nTPM: 68.2
2183 Male, age 80, midline 70.9
2145 Male, age 76, midline 68.6
1924 Male, age 61, midline 65.0
Nucleus tractus solitarii
nTPM: 68.4
2307 Male, age 80, both hemispheres 85.0
2191 Female, age 85, both hemispheres 75.4
2656 Male, age 76, both hemispheres 61.5
2144 Female, age 91, right hemisphere 51.6
Paramedian reticular nucleus
nTPM: 62.4
2313 Male, age 61, both hemispheres 74.4
2057 Male, age 80, both hemispheres 65.9
2050 Female, age 85, both hemispheres 58.9
2052 Male, age 76, both hemispheres 50.4
Parvicellular reticular nuclei
nTPM: 67.2
2558 Male, age 74, both hemispheres 77.1
2119 Male, age 80, both hemispheres 65.7
2095 Male, age 76, both hemispheres 58.8
Parvicellular reticular nuclei, medullary
nTPM: 65.9
2189 Female, age 91, both hemispheres 71.3
2181 Male, age 80, left hemisphere 64.2
2091 Female, age 85, both hemispheres 62.3
Pedunculopontine tegmental nucleus
nTPM: 66.6
1921 Female, age 85, both hemispheres 68.8
2334 Male, age 80, both hemispheres 67.4
2338 Male, age 61, both hemispheres 63.6
Peritrigeminal nucleus
nTPM: 66.3
2067 Female, age 85, both hemispheres 71.9
2136 Male, age 76, both hemispheres 63.7
2179 Male, age 61, both hemispheres 63.4
Pontine nuclei
nTPM: 63.7
2115 Male, age 80, left hemisphere 77.2
2319 Female, age 91, both hemispheres 76.3
2787 Female, age 85, both hemispheres 74.0
2109 Female, age 72, unknown 65.9
1863 Male, age 55, unknown 59.9
2454 Male, age 74, left hemisphere 54.6
1968 Male, age 76, left hemisphere 52.1
2727 Male, age 61, right hemisphere 49.4
Pontine raphe nucleus
nTPM: 62.1
2853 Male, age 76, midline 66.2
2122 Female, age 85, midline 58.0
Posteroventral cochlear nucleus
nTPM: 70.7
2371 Male, age 61, both hemispheres 100.2
2341 Male, age 80, both hemispheres 71.2
2135 Female, age 91, both hemispheres 68.2
2070 Male, age 76, both hemispheres 60.5
2752 Female, age 85, both hemispheres 53.4
Prepositus hypoglossal nucleus
nTPM: 75.1
2086 Male, age 80, both hemispheres 87.1
2855 Female, age 85, right hemisphere 63.1
Principal sensory trigeminal nucleus
nTPM: 62.1
2324 Male, age 76, both hemispheres 66.8
2367 Female, age 91, left hemisphere 64.3
2008 Male, age 80, left hemisphere 63.2
2158 Male, age 61, both hemispheres 54.1
Reticular pontine nucleus, caudal
nTPM: 67.8
2332 Male, age 80, right hemisphere 81.6
2457 Female, age 91, both hemispheres 71.0
2559 Male, age 74, both hemispheres 67.0
2092 Male, age 76, both hemispheres 51.3
Reticular pontine nucleus, oral
nTPM: 60.7
1939 Male, age 80, both hemispheres 75.7
2366 Female, age 91, both hemispheres 67.8
2167 Male, age 76, both hemispheres 59.2
2012 Female, age 85, both hemispheres 56.0
2361 Male, age 74, both hemispheres 45.1
Reticulotegmental nucleus
nTPM: 70.3
2333 Male, age 80, both hemispheres 83.6
2452 Male, age 74, both hemispheres 74.3
2322 Female, age 91, both hemispheres 68.6
2325 Male, age 76, both hemispheres 54.7
Spinal trigeminal nucleus, caudal
nTPM: 73.7
2308 Male, age 80, both hemispheres 86.2
2642 Male, age 74, both hemispheres 77.0
2312 Male, age 61, both hemispheres 70.9
2447 Male, age 76, both hemispheres 69.6
2390 Female, age 91, both hemispheres 65.0
Spinal trigeminal nucleus, interpolar
nTPM: 61.2
2625 Male, age 61, both hemispheres 69.9
2033 Male, age 80, both hemispheres 67.5
2389 Female, age 91, both hemispheres 65.6
2066 Male, age 76, right hemisphere 51.9
2386 Female, age 85, both hemispheres 51.3
Spinal trigeminal nucleus, oral
nTPM: 72.6
2737 Female, age 85, both hemispheres 85.4
2164 Male, age 80, both hemispheres 78.7
1978 Male, age 76, both hemispheres 53.7
Spinal vestibular nucleus
nTPM: 65.1
2796 Male, age 61, both hemispheres 81.3
2780 Male, age 80, both hemispheres 73.8
2384 Male, age 74, both hemispheres 67.1
2186 Female, age 91, both hemispheres 60.5
2748 Male, age 76, both hemispheres 59.4
2806 Female, age 85, both hemispheres 48.7
Subcoeruleus area
nTPM: 64.5
2451 Male, age 74, both hemispheres 73.3
2323 Female, age 91, left hemisphere 68.1
1958 Male, age 80, both hemispheres 63.7
2369 Female, age 85, left hemisphere 62.1
2089 Male, age 76, left hemisphere 55.4
Superior olive
nTPM: 64.3
2329 Male, age 80, right hemisphere 75.2
2561 Female, age 91, both hemispheres 73.3
2020 Male, age 76, both hemispheres 63.1
2364 Male, age 74, right hemisphere 57.7
1875 Female, age 85, both hemispheres 52.2
Superior vestibular nucleus
nTPM: 66.0
2015 Male, age 80, both hemispheres 77.8
2061 Male, age 76, both hemispheres 69.6
2383 Male, age 74, both hemispheres 50.7
Ventral medullary reticular nucleus
nTPM: 66.8
2372 Male, age 61, both hemispheres 72.6
2060 Male, age 76, both hemispheres 61.1
Ventral periolivary nuclei
nTPM: 56.6
2794 Female, age 91, left hemisphere 63.4
2165 Male, age 80, both hemispheres 56.5
2023 Male, age 76, both hemispheres 54.6
2130 Female, age 85, both hemispheres 51.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 73.3
2302 Female, age 91, both hemispheres 87.8
2118 Male, age 80, both hemispheres 77.2
1986 Male, age 76, both hemispheres 73.6
2180 Male, age 61, both hemispheres 67.0
2741 Female, age 85, both hemispheres 60.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 64.7
2359 Male, age 61, both hemispheres 79.8
2456 Female, age 91, both hemispheres 72.8
2161 Male, age 80, both hemispheres 71.6
2449 Male, age 74, both hemispheres 57.5
2840 Female, age 85, both hemispheres 57.5
1959 Male, age 76, both hemispheres 48.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 84.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 84.2
FF:10165-103B3 76 years, female 104.6
FF:10182-103D2 60 years, female 63.9
Medulla oblongata
Scaled Tags Per Million: 82.5
FF:10155-103A2 76 years, female 117.7
FF:10038-101F2 18-64 years, mixed 72.4
FF:10174-103C3 60 years, female 57.4
Pons
Scaled Tags Per Million: 43.9
FF:10033-101E6 18-54 years, mixed 43.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 14.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 14.6
Samples: 4

Max nTPM: 16.9
Min nTPM: 13.1
Sample A Female 13.1
Sample B Female 13.4
Sample C Male 14.8
Sample D Male 16.9
Pons
nTPM: 13.0
Samples: 4

Max nTPM: 18.3
Min nTPM: 10.3
Sample A Female 18.3
Sample B Female 10.3
Sample C Male 10.9
Sample D Male 12.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 11.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 11.8
Samples: 4

Max nTPM: 13.0
Min nTPM: 11.1
Sample A Male 11.4
Sample B Male 11.7
Sample C Female 13.0
Sample D Female 11.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
74821702 Antisense, RP_060321_02_C04, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.2
74821702 Antisense, RP_060321_02_C04, Mouse strain C57BL/6J (56 days, male) 0.2

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org