PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:52.6 nTPM
FANTOM5:16.0 Scaled Tags Per Million
Pig:16.1 nTPM
Mouse:10.6 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 52.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 43.4
2090 Male, age 80, both hemispheres 44.6
2188 Female, age 91, both hemispheres 43.8
2301 Female, age 85, both hemispheres 43.3
1984 Male, age 76, both hemispheres 41.9
Area postrema
nTPM: 42.6
2306 Male, age 80, both hemispheres 49.3
2799 Male, age 61, both hemispheres 44.6
2054 Male, age 76, both hemispheres 34.1
Dorsal cochlear nucleus
nTPM: 43.4
2378 Male, age 80, both hemispheres 47.2
2187 Female, age 91, both hemispheres 44.6
2802 Male, age 74, right hemisphere 43.0
2058 Male, age 76, both hemispheres 41.5
2370 Male, age 61, both hemispheres 40.5
Dorsal medullary reticular nucleus
nTPM: 47.2
2373 Male, age 61, both hemispheres 52.0
2088 Male, age 76, both hemispheres 45.7
2040 Female, age 85, both hemispheres 43.9
Dorsal motor vagal complex
nTPM: 44.0
2797 Male, age 61, both hemispheres 49.8
2643 Male, age 74, both hemispheres 48.9
2844 Male, age 55, unknown 46.3
2807 Female, age 85, both hemispheres 44.0
2185 Male, age 76, both hemispheres 43.2
2000 Male, age 74, unknown 41.3
2133 Female, age 91, both hemispheres 40.1
2813 Female, age 72, unknown 38.5
Dorsal tegmental nucleus
nTPM: 42.0
2358 Male, age 61, both hemispheres 47.5
2083 Male, age 80, both hemispheres 43.1
2326 Male, age 74, both hemispheres 39.1
1936 Male, age 76, left hemisphere 38.4
Dorsolateral tegmental area
nTPM: 40.4
2337 Male, age 61, both hemispheres 47.8
2654 Male, age 80, both hemispheres 43.1
2751 Female, age 85, both hemispheres 40.4
2141 Male, age 76, both hemispheres 37.3
2360 Male, age 74, both hemispheres 33.2
Gigantocellular reticular nuclei, medullary
nTPM: 43.1
2387 Female, age 91, both hemispheres 47.2
2310 Male, age 80, both hemispheres 47.1
2462 Male, age 74, both hemispheres 45.2
2314 Male, age 61, both hemispheres 43.4
1876 Female, age 85, both hemispheres 38.7
2022 Male, age 76, right hemisphere 36.7
Gigantocellular reticular nuclei, pars
nTPM: 45.9
2336 Male, age 61, both hemispheres 48.8
2084 Female, age 85, both hemispheres 48.1
2330 Male, age 80, both hemispheres 45.8
2706 Male, age 80, both hemispheres 44.0
2168 Male, age 76, both hemispheres 42.7
Inferior olive
nTPM: 44.3
2628 Female, age 91, both hemispheres 48.7
2379 Male, age 80, both hemispheres 46.9
2178 Male, age 61, both hemispheres 46.6
2085 Female, age 85, both hemispheres 41.9
2563 Male, age 74, both hemispheres 37.3
Kolliker-Fuse nucleus
nTPM: 38.8
2793 Female, age 91, left hemisphere 43.9
2163 Male, age 80, both hemispheres 42.0
2315 Male, age 76, right hemisphere 30.7
Lateral lemniscal nuclei
nTPM: 44.9
2320 Female, age 91, left hemisphere 49.0
2453 Male, age 74, right hemisphere 46.5
2036 Male, age 80, both hemispheres 45.1
2169 Male, age 76, both hemispheres 42.9
2746 Female, age 85, left hemisphere 40.9
Lateral medullary reticular nucleus
nTPM: 41.5
2374 Male, age 61, both hemispheres 48.6
2190 Female, age 85, both hemispheres 43.8
2852 Male, age 80, both hemispheres 42.4
2804 Female, age 91, both hemispheres 41.9
2044 Male, age 76, both hemispheres 36.2
2305 Male, age 74, both hemispheres 36.1
Lateral parabrachial nucleus
nTPM: 40.2
2790 Male, age 61, both hemispheres 46.3
2013 Male, age 80, both hemispheres 41.5
2139 Female, age 85, right hemisphere 39.3
2792 Male, age 76, both hemispheres 33.8
Lateral vestibular nucleus
nTPM: 44.3
2311 Male, age 80, both hemispheres 45.7
2184 Male, age 76, both hemispheres 42.9
Locus coeruleus
nTPM: 48.5
2720 Male, age 74, both hemispheres 53.3
2317 Female, age 72, unknown 51.6
1980 Male, age 76, both hemispheres 51.5
2162 Male, age 80, both hemispheres 50.6
2014 Male, age 55, unknown 49.8
2123 Female, age 91, both hemispheres 48.1
2788 Male, age 74, unknown 35.0
Medial olivary nucleus
nTPM: 39.2
2138 Female, age 91, both hemispheres 45.2
2851 Male, age 80, both hemispheres 45.1
1943 Male, age 61, both hemispheres 35.1
1962 Male, age 76, both hemispheres 31.4
Medial parabrachial nucleus
nTPM: 42.9
2156 Male, age 61, both hemispheres 47.5
2170 Female, age 91, both hemispheres 43.1
2786 Male, age 76, both hemispheres 42.4
2463 Female, age 85, right hemisphere 42.1
2854 Male, age 80, both hemispheres 39.3
Medial periolivary nuclei
nTPM: 43.1
2458 Female, age 91, both hemispheres 49.0
2081 Male, age 80, both hemispheres 43.6
2171 Female, age 85, both hemispheres 43.1
2063 Male, age 76, both hemispheres 42.5
2791 Male, age 74, right hemisphere 37.6
Medial vestibular nucleus
nTPM: 39.9
2624 Male, age 61, both hemispheres 43.8
2093 Male, age 80, both hemispheres 41.5
2803 Female, age 91, both hemispheres 39.5
2801 Male, age 74, both hemispheres 39.3
2134 Male, age 76, both hemispheres 38.2
2743 Female, age 85, both hemispheres 36.7
Motor facial nucleus
nTPM: 43.2
2327 Male, age 80, both hemispheres 49.4
2795 Female, age 91, both hemispheres 47.0
2697 Female, age 85, both hemispheres 41.7
2062 Male, age 76, both hemispheres 41.6
2365 Male, age 74, right hemisphere 40.0
2126 Male, age 61, both hemispheres 39.8
Motor hypoglossal nucleus
nTPM: 44.1
2182 Male, age 80, both hemispheres 52.8
2125 Female, age 91, both hemispheres 47.8
2132 Female, age 85, both hemispheres 42.2
2277 Male, age 76, both hemispheres 41.0
2461 Male, age 61, both hemispheres 36.8
Motor trigeminal nucleus
nTPM: 44.8
2560 Male, age 74, both hemispheres 50.8
2321 Female, age 91, both hemispheres 48.3
2309 Male, age 76, both hemispheres 44.7
2335 Male, age 61, both hemispheres 42.5
2079 Male, age 80, both hemispheres 37.8
Nuclei of the trapezoid body
nTPM: 41.4
2368 Female, age 91, both hemispheres 44.7
2166 Male, age 80, both hemispheres 43.4
2159 Male, age 61, both hemispheres 39.8
1983 Male, age 76, both hemispheres 39.6
2735 Female, age 85, both hemispheres 39.4
Nucleus ambiguus
nTPM: 52.6
2096 Female, age 85, both hemispheres 68.1
2071 Male, age 76, both hemispheres 37.2
Nucleus cuneatus
nTPM: 46.8
2805 Female, age 91, both hemispheres 57.3
2564 Male, age 74, both hemispheres 49.0
2100 Male, age 76, both hemispheres 48.6
2131 Male, age 76, both hemispheres 48.5
2380 Male, age 80, both hemispheres 47.2
2562 Male, age 61, both hemispheres 45.2
2376 Male, age 61, both hemispheres 42.5
2808 Female, age 85, both hemispheres 41.5
2381 Male, age 80, both hemispheres 41.2
Nucleus gracilis
nTPM: 46.2
2382 Male, age 80, both hemispheres 48.3
2299 Female, age 85, both hemispheres 48.2
2627 Male, age 74, both hemispheres 42.0
Nucleus raphe magnus
nTPM: 42.0
2459 Female, age 91, both hemispheres 47.8
2172 Female, age 85, both hemispheres 46.1
2328 Male, age 80, both hemispheres 44.8
2051 Male, age 76, both hemispheres 40.3
2455 Male, age 74, both hemispheres 38.3
2160 Male, age 61, both hemispheres 34.6
Nucleus raphe obscurus
nTPM: 40.1
2800 Male, age 61, midline 41.2
2845 Female, age 85, midline 40.0
2142 Male, age 76, midline 39.1
Nucleus raphe pallidus
nTPM: 40.0
2183 Male, age 80, midline 47.6
1924 Male, age 61, midline 38.0
2145 Male, age 76, midline 34.3
Nucleus tractus solitarii
nTPM: 36.5
2307 Male, age 80, both hemispheres 48.9
2656 Male, age 76, both hemispheres 40.7
2191 Female, age 85, both hemispheres 39.4
2144 Female, age 91, right hemisphere 17.1
Paramedian reticular nucleus
nTPM: 40.5
2057 Male, age 80, both hemispheres 46.6
2313 Male, age 61, both hemispheres 45.7
2050 Female, age 85, both hemispheres 41.2
2052 Male, age 76, both hemispheres 28.5
Parvicellular reticular nuclei
nTPM: 44.9
2558 Male, age 74, both hemispheres 47.2
2119 Male, age 80, both hemispheres 45.0
2095 Male, age 76, both hemispheres 42.4
Parvicellular reticular nuclei, medullary
nTPM: 47.3
2189 Female, age 91, both hemispheres 50.0
2181 Male, age 80, left hemisphere 47.9
2091 Female, age 85, both hemispheres 44.2
Pedunculopontine tegmental nucleus
nTPM: 42.6
2334 Male, age 80, both hemispheres 47.5
1921 Female, age 85, both hemispheres 40.2
2338 Male, age 61, both hemispheres 40.0
Peritrigeminal nucleus
nTPM: 38.3
2136 Male, age 76, both hemispheres 39.0
2067 Female, age 85, both hemispheres 38.3
2179 Male, age 61, both hemispheres 37.7
Pontine nuclei
nTPM: 42.9
2787 Female, age 85, both hemispheres 50.1
2319 Female, age 91, both hemispheres 47.8
2115 Male, age 80, left hemisphere 46.4
1968 Male, age 76, left hemisphere 44.4
1863 Male, age 55, unknown 42.1
2454 Male, age 74, left hemisphere 41.2
2109 Female, age 72, unknown 39.1
2727 Male, age 61, right hemisphere 32.2
Pontine raphe nucleus
nTPM: 43.9
2122 Female, age 85, midline 45.1
2853 Male, age 76, midline 42.7
Posteroventral cochlear nucleus
nTPM: 39.4
2070 Male, age 76, both hemispheres 44.4
2371 Male, age 61, both hemispheres 40.4
2135 Female, age 91, both hemispheres 39.1
2752 Female, age 85, both hemispheres 38.6
2341 Male, age 80, both hemispheres 34.5
Prepositus hypoglossal nucleus
nTPM: 38.1
2086 Male, age 80, both hemispheres 41.0
2855 Female, age 85, right hemisphere 35.1
Principal sensory trigeminal nucleus
nTPM: 42.1
2324 Male, age 76, both hemispheres 46.5
2367 Female, age 91, left hemisphere 43.3
2008 Male, age 80, left hemisphere 41.2
2158 Male, age 61, both hemispheres 37.5
Reticular pontine nucleus, caudal
nTPM: 44.1
2332 Male, age 80, right hemisphere 49.9
2559 Male, age 74, both hemispheres 45.3
2457 Female, age 91, both hemispheres 44.5
2092 Male, age 76, both hemispheres 36.6
Reticular pontine nucleus, oral
nTPM: 41.2
2366 Female, age 91, both hemispheres 46.1
2361 Male, age 74, both hemispheres 41.7
2167 Male, age 76, both hemispheres 40.9
1939 Male, age 80, both hemispheres 40.2
2012 Female, age 85, both hemispheres 37.0
Reticulotegmental nucleus
nTPM: 45.7
2452 Male, age 74, both hemispheres 48.3
2333 Male, age 80, both hemispheres 47.6
2322 Female, age 91, both hemispheres 44.2
2325 Male, age 76, both hemispheres 42.8
Spinal trigeminal nucleus, caudal
nTPM: 45.3
2308 Male, age 80, both hemispheres 47.9
2447 Male, age 76, both hemispheres 46.2
2642 Male, age 74, both hemispheres 44.7
2390 Female, age 91, both hemispheres 44.3
2312 Male, age 61, both hemispheres 43.5
Spinal trigeminal nucleus, interpolar
nTPM: 39.5
2033 Male, age 80, both hemispheres 41.8
2389 Female, age 91, both hemispheres 41.5
2625 Male, age 61, both hemispheres 38.4
2386 Female, age 85, both hemispheres 38.0
2066 Male, age 76, right hemisphere 37.9
Spinal trigeminal nucleus, oral
nTPM: 43.6
1978 Male, age 76, both hemispheres 46.9
2164 Male, age 80, both hemispheres 45.3
2737 Female, age 85, both hemispheres 38.5
Spinal vestibular nucleus
nTPM: 41.8
2186 Female, age 91, both hemispheres 44.6
2780 Male, age 80, both hemispheres 44.4
2384 Male, age 74, both hemispheres 43.2
2748 Male, age 76, both hemispheres 43.2
2806 Female, age 85, both hemispheres 38.0
2796 Male, age 61, both hemispheres 37.4
Subcoeruleus area
nTPM: 43.9
2451 Male, age 74, both hemispheres 48.3
2089 Male, age 76, left hemisphere 47.7
2323 Female, age 91, left hemisphere 45.5
1958 Male, age 80, both hemispheres 39.3
2369 Female, age 85, left hemisphere 38.8
Superior olive
nTPM: 41.5
2561 Female, age 91, both hemispheres 46.3
2329 Male, age 80, right hemisphere 45.8
2020 Male, age 76, both hemispheres 40.0
2364 Male, age 74, right hemisphere 38.4
1875 Female, age 85, both hemispheres 36.8
Superior vestibular nucleus
nTPM: 34.5
2015 Male, age 80, both hemispheres 37.8
2061 Male, age 76, both hemispheres 36.7
2383 Male, age 74, both hemispheres 29.0
Ventral medullary reticular nucleus
nTPM: 45.7
2060 Male, age 76, both hemispheres 46.4
2372 Male, age 61, both hemispheres 45.1
Ventral periolivary nuclei
nTPM: 42.1
2794 Female, age 91, left hemisphere 47.3
2130 Female, age 85, both hemispheres 45.2
2165 Male, age 80, both hemispheres 41.0
2023 Male, age 76, both hemispheres 34.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 42.3
2302 Female, age 91, both hemispheres 45.7
2118 Male, age 80, both hemispheres 45.1
2180 Male, age 61, both hemispheres 42.2
2741 Female, age 85, both hemispheres 40.0
1986 Male, age 76, both hemispheres 38.5
Ventrolateral tegmental area, A5 NE cell group
nTPM: 43.9
2456 Female, age 91, both hemispheres 54.3
2161 Male, age 80, both hemispheres 46.0
1959 Male, age 76, both hemispheres 41.4
2359 Male, age 61, both hemispheres 41.0
2449 Male, age 74, both hemispheres 40.4
2840 Female, age 85, both hemispheres 40.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 16.0
FF:10165-103B3 76 years, female 17.8
FF:10182-103D2 60 years, female 14.2
Medulla oblongata
Scaled Tags Per Million: 10.7
FF:10155-103A2 76 years, female 14.6
FF:10038-101F2 18-64 years, mixed 12.5
FF:10174-103C3 60 years, female 5.0
Pons
Scaled Tags Per Million: 10.9
FF:10033-101E6 18-54 years, mixed 10.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 16.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 13.7
Samples: 4

Max nTPM: 15.0
Min nTPM: 12.9
Sample A Female 13.6
Sample B Female 12.9
Sample C Male 15.0
Sample D Male 13.1
Pons
nTPM: 16.1
Samples: 4

Max nTPM: 22.9
Min nTPM: 13.7
Sample A Female 22.9
Sample B Female 14.0
Sample C Male 13.7
Sample D Male 13.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 10.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 10.6
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.7
Sample A Male 11.3
Sample B Male 10.0
Sample C Female 11.3
Sample D Female 9.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
71211359 Antisense, RP_050816_01_D01, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.2
71211359 Antisense, RP_050816_01_D01, Mouse strain C57BL/6J (56 days, male) 0.2

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