PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:229.2 nTPM
FANTOM5:251.2 Scaled Tags Per Million
Pig:128.2 nTPM
Mouse:40.4 nTPM
Allen mouse:5.2 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 229.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 163.6
2301 Female, age 85, both hemispheres 217.3
2188 Female, age 91, both hemispheres 182.0
2090 Male, age 80, both hemispheres 169.6
1984 Male, age 76, both hemispheres 85.6
Area postrema
nTPM: 166.9
2306 Male, age 80, both hemispheres 257.1
2799 Male, age 61, both hemispheres 136.7
2054 Male, age 76, both hemispheres 106.7
Dorsal cochlear nucleus
nTPM: 141.8
2378 Male, age 80, both hemispheres 160.6
2187 Female, age 91, both hemispheres 160.1
2370 Male, age 61, both hemispheres 138.2
2058 Male, age 76, both hemispheres 127.9
2802 Male, age 74, right hemisphere 122.2
Dorsal medullary reticular nucleus
nTPM: 160.9
2373 Male, age 61, both hemispheres 183.2
2088 Male, age 76, both hemispheres 155.4
2040 Female, age 85, both hemispheres 144.2
Dorsal motor vagal complex
nTPM: 132.6
2185 Male, age 76, both hemispheres 249.8
2643 Male, age 74, both hemispheres 138.7
2813 Female, age 72, unknown 126.8
2000 Male, age 74, unknown 120.6
2807 Female, age 85, both hemispheres 117.3
2133 Female, age 91, both hemispheres 110.6
2844 Male, age 55, unknown 99.1
2797 Male, age 61, both hemispheres 98.2
Dorsal tegmental nucleus
nTPM: 127.7
2083 Male, age 80, both hemispheres 173.8
2326 Male, age 74, both hemispheres 121.1
2358 Male, age 61, both hemispheres 119.0
1936 Male, age 76, left hemisphere 96.7
Dorsolateral tegmental area
nTPM: 132.2
2337 Male, age 61, both hemispheres 175.0
2751 Female, age 85, both hemispheres 174.3
2654 Male, age 80, both hemispheres 156.5
2360 Male, age 74, both hemispheres 81.7
2141 Male, age 76, both hemispheres 73.5
Gigantocellular reticular nuclei, medullary
nTPM: 161.4
2314 Male, age 61, both hemispheres 265.6
2387 Female, age 91, both hemispheres 169.1
2310 Male, age 80, both hemispheres 155.1
1876 Female, age 85, both hemispheres 149.6
2022 Male, age 76, right hemisphere 140.3
2462 Male, age 74, both hemispheres 88.8
Gigantocellular reticular nuclei, pars
nTPM: 150.7
2336 Male, age 61, both hemispheres 189.6
2330 Male, age 80, both hemispheres 167.4
2706 Male, age 80, both hemispheres 162.4
2084 Female, age 85, both hemispheres 124.6
2168 Male, age 76, both hemispheres 109.5
Inferior olive
nTPM: 176.9
2178 Male, age 61, both hemispheres 235.7
2628 Female, age 91, both hemispheres 199.2
2085 Female, age 85, both hemispheres 153.7
2379 Male, age 80, both hemispheres 153.6
2563 Male, age 74, both hemispheres 142.5
Kolliker-Fuse nucleus
nTPM: 146.4
2793 Female, age 91, left hemisphere 222.4
2163 Male, age 80, both hemispheres 133.7
2315 Male, age 76, right hemisphere 83.3
Lateral lemniscal nuclei
nTPM: 134.6
2320 Female, age 91, left hemisphere 181.9
2746 Female, age 85, left hemisphere 139.0
2169 Male, age 76, both hemispheres 125.8
2036 Male, age 80, both hemispheres 118.9
2453 Male, age 74, right hemisphere 107.7
Lateral medullary reticular nucleus
nTPM: 190.9
2852 Male, age 80, both hemispheres 258.9
2374 Male, age 61, both hemispheres 242.5
2305 Male, age 74, both hemispheres 179.3
2190 Female, age 85, both hemispheres 174.3
2044 Male, age 76, both hemispheres 155.2
2804 Female, age 91, both hemispheres 135.0
Lateral parabrachial nucleus
nTPM: 160.8
2792 Male, age 76, both hemispheres 205.0
2790 Male, age 61, both hemispheres 168.6
2013 Male, age 80, both hemispheres 168.5
2139 Female, age 85, right hemisphere 101.1
Lateral vestibular nucleus
nTPM: 157.0
2311 Male, age 80, both hemispheres 178.6
2184 Male, age 76, both hemispheres 135.5
Locus coeruleus
nTPM: 80.0
2162 Male, age 80, both hemispheres 108.8
2720 Male, age 74, both hemispheres 107.4
2317 Female, age 72, unknown 88.1
2123 Female, age 91, both hemispheres 70.8
2014 Male, age 55, unknown 65.1
2788 Male, age 74, unknown 63.7
1980 Male, age 76, both hemispheres 56.3
Medial olivary nucleus
nTPM: 205.8
1943 Male, age 61, both hemispheres 268.9
2851 Male, age 80, both hemispheres 216.6
1962 Male, age 76, both hemispheres 200.4
2138 Female, age 91, both hemispheres 137.6
Medial parabrachial nucleus
nTPM: 155.8
2170 Female, age 91, both hemispheres 176.6
2854 Male, age 80, both hemispheres 164.1
2463 Female, age 85, right hemisphere 157.3
2786 Male, age 76, both hemispheres 148.2
2156 Male, age 61, both hemispheres 133.0
Medial periolivary nuclei
nTPM: 130.6
2081 Male, age 80, both hemispheres 170.6
2458 Female, age 91, both hemispheres 153.2
2063 Male, age 76, both hemispheres 123.5
2791 Male, age 74, right hemisphere 119.4
2171 Female, age 85, both hemispheres 86.1
Medial vestibular nucleus
nTPM: 136.1
2624 Male, age 61, both hemispheres 177.9
2803 Female, age 91, both hemispheres 166.0
2801 Male, age 74, both hemispheres 163.4
2093 Male, age 80, both hemispheres 140.2
2743 Female, age 85, both hemispheres 99.7
2134 Male, age 76, both hemispheres 69.1
Motor facial nucleus
nTPM: 148.1
2697 Female, age 85, both hemispheres 195.9
2126 Male, age 61, both hemispheres 181.2
2327 Male, age 80, both hemispheres 142.0
2365 Male, age 74, right hemisphere 136.8
2795 Female, age 91, both hemispheres 126.9
2062 Male, age 76, both hemispheres 105.9
Motor hypoglossal nucleus
nTPM: 151.7
2182 Male, age 80, both hemispheres 211.7
2132 Female, age 85, both hemispheres 172.5
2125 Female, age 91, both hemispheres 168.3
2461 Male, age 61, both hemispheres 128.8
2277 Male, age 76, both hemispheres 77.1
Motor trigeminal nucleus
nTPM: 145.3
2321 Female, age 91, both hemispheres 166.7
2560 Male, age 74, both hemispheres 151.2
2335 Male, age 61, both hemispheres 143.0
2309 Male, age 76, both hemispheres 140.6
2079 Male, age 80, both hemispheres 125.1
Nuclei of the trapezoid body
nTPM: 121.9
2166 Male, age 80, both hemispheres 159.9
2368 Female, age 91, both hemispheres 135.7
2159 Male, age 61, both hemispheres 127.9
1983 Male, age 76, both hemispheres 116.6
2735 Female, age 85, both hemispheres 69.5
Nucleus ambiguus
nTPM: 198.5
2071 Male, age 76, both hemispheres 224.8
2096 Female, age 85, both hemispheres 172.2
Nucleus cuneatus
nTPM: 180.0
2380 Male, age 80, both hemispheres 239.5
2808 Female, age 85, both hemispheres 210.7
2381 Male, age 80, both hemispheres 203.6
2376 Male, age 61, both hemispheres 195.3
2100 Male, age 76, both hemispheres 188.1
2131 Male, age 76, both hemispheres 150.5
2564 Male, age 74, both hemispheres 146.2
2562 Male, age 61, both hemispheres 146.0
2805 Female, age 91, both hemispheres 139.9
Nucleus gracilis
nTPM: 229.2
2382 Male, age 80, both hemispheres 289.2
2299 Female, age 85, both hemispheres 207.2
2627 Male, age 74, both hemispheres 191.3
Nucleus raphe magnus
nTPM: 125.9
2051 Male, age 76, both hemispheres 176.1
2328 Male, age 80, both hemispheres 162.4
2459 Female, age 91, both hemispheres 159.8
2455 Male, age 74, both hemispheres 107.6
2160 Male, age 61, both hemispheres 75.8
2172 Female, age 85, both hemispheres 73.7
Nucleus raphe obscurus
nTPM: 224.5
2845 Female, age 85, midline 240.2
2142 Male, age 76, midline 227.7
2800 Male, age 61, midline 205.4
Nucleus raphe pallidus
nTPM: 197.6
2145 Male, age 76, midline 226.7
1924 Male, age 61, midline 204.6
2183 Male, age 80, midline 161.5
Nucleus tractus solitarii
nTPM: 78.0
2656 Male, age 76, both hemispheres 104.3
2307 Male, age 80, both hemispheres 94.5
2191 Female, age 85, both hemispheres 70.6
2144 Female, age 91, right hemisphere 42.7
Paramedian reticular nucleus
nTPM: 127.9
2057 Male, age 80, both hemispheres 139.6
2052 Male, age 76, both hemispheres 128.2
2050 Female, age 85, both hemispheres 125.5
2313 Male, age 61, both hemispheres 118.1
Parvicellular reticular nuclei
nTPM: 138.5
2095 Male, age 76, both hemispheres 157.3
2119 Male, age 80, both hemispheres 149.4
2558 Male, age 74, both hemispheres 109.0
Parvicellular reticular nuclei, medullary
nTPM: 132.6
2189 Female, age 91, both hemispheres 145.1
2181 Male, age 80, left hemisphere 128.1
2091 Female, age 85, both hemispheres 124.6
Pedunculopontine tegmental nucleus
nTPM: 137.5
2338 Male, age 61, both hemispheres 160.4
2334 Male, age 80, both hemispheres 142.8
1921 Female, age 85, both hemispheres 109.2
Peritrigeminal nucleus
nTPM: 165.5
2179 Male, age 61, both hemispheres 170.0
2067 Female, age 85, both hemispheres 163.7
2136 Male, age 76, both hemispheres 162.7
Pontine nuclei
nTPM: 146.7
2319 Female, age 91, both hemispheres 187.8
2454 Male, age 74, left hemisphere 174.6
2115 Male, age 80, left hemisphere 157.1
2109 Female, age 72, unknown 152.0
1968 Male, age 76, left hemisphere 149.8
1863 Male, age 55, unknown 132.1
2787 Female, age 85, both hemispheres 114.9
2727 Male, age 61, right hemisphere 105.2
Pontine raphe nucleus
nTPM: 105.8
2853 Male, age 76, midline 112.9
2122 Female, age 85, midline 98.7
Posteroventral cochlear nucleus
nTPM: 162.8
2135 Female, age 91, both hemispheres 189.3
2070 Male, age 76, both hemispheres 181.9
2341 Male, age 80, both hemispheres 178.3
2371 Male, age 61, both hemispheres 163.8
2752 Female, age 85, both hemispheres 100.9
Prepositus hypoglossal nucleus
nTPM: 136.5
2855 Female, age 85, right hemisphere 164.6
2086 Male, age 80, both hemispheres 108.4
Principal sensory trigeminal nucleus
nTPM: 127.6
2367 Female, age 91, left hemisphere 189.1
2324 Male, age 76, both hemispheres 127.8
2008 Male, age 80, left hemisphere 99.8
2158 Male, age 61, both hemispheres 93.8
Reticular pontine nucleus, caudal
nTPM: 160.1
2457 Female, age 91, both hemispheres 183.8
2559 Male, age 74, both hemispheres 168.5
2092 Male, age 76, both hemispheres 149.2
2332 Male, age 80, right hemisphere 139.0
Reticular pontine nucleus, oral
nTPM: 166.6
2366 Female, age 91, both hemispheres 204.2
2361 Male, age 74, both hemispheres 174.7
2167 Male, age 76, both hemispheres 165.0
1939 Male, age 80, both hemispheres 158.2
2012 Female, age 85, both hemispheres 130.7
Reticulotegmental nucleus
nTPM: 129.1
2322 Female, age 91, both hemispheres 152.2
2333 Male, age 80, both hemispheres 144.4
2452 Male, age 74, both hemispheres 132.4
2325 Male, age 76, both hemispheres 87.6
Spinal trigeminal nucleus, caudal
nTPM: 179.2
2312 Male, age 61, both hemispheres 232.1
2308 Male, age 80, both hemispheres 196.1
2447 Male, age 76, both hemispheres 174.8
2642 Male, age 74, both hemispheres 155.5
2390 Female, age 91, both hemispheres 137.4
Spinal trigeminal nucleus, interpolar
nTPM: 122.7
2389 Female, age 91, both hemispheres 140.9
2386 Female, age 85, both hemispheres 138.2
2033 Male, age 80, both hemispheres 134.3
2625 Male, age 61, both hemispheres 104.5
2066 Male, age 76, right hemisphere 95.6
Spinal trigeminal nucleus, oral
nTPM: 132.0
2164 Male, age 80, both hemispheres 153.2
1978 Male, age 76, both hemispheres 150.1
2737 Female, age 85, both hemispheres 92.7
Spinal vestibular nucleus
nTPM: 158.6
2748 Male, age 76, both hemispheres 220.0
2806 Female, age 85, both hemispheres 166.9
2186 Female, age 91, both hemispheres 149.5
2780 Male, age 80, both hemispheres 144.8
2384 Male, age 74, both hemispheres 142.4
2796 Male, age 61, both hemispheres 128.0
Subcoeruleus area
nTPM: 137.3
2369 Female, age 85, left hemisphere 206.1
2089 Male, age 76, left hemisphere 129.9
1958 Male, age 80, both hemispheres 124.0
2323 Female, age 91, left hemisphere 114.6
2451 Male, age 74, both hemispheres 112.1
Superior olive
nTPM: 145.4
2329 Male, age 80, right hemisphere 172.1
2561 Female, age 91, both hemispheres 154.9
2020 Male, age 76, both hemispheres 154.0
2364 Male, age 74, right hemisphere 135.0
1875 Female, age 85, both hemispheres 111.1
Superior vestibular nucleus
nTPM: 108.8
2015 Male, age 80, both hemispheres 135.1
2061 Male, age 76, both hemispheres 106.8
2383 Male, age 74, both hemispheres 84.7
Ventral medullary reticular nucleus
nTPM: 204.2
2372 Male, age 61, both hemispheres 212.6
2060 Male, age 76, both hemispheres 195.8
Ventral periolivary nuclei
nTPM: 117.3
2023 Male, age 76, both hemispheres 147.6
2165 Male, age 80, both hemispheres 130.5
2794 Female, age 91, left hemisphere 107.0
2130 Female, age 85, both hemispheres 84.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 162.3
2180 Male, age 61, both hemispheres 200.3
2118 Male, age 80, both hemispheres 196.9
1986 Male, age 76, both hemispheres 143.5
2741 Female, age 85, both hemispheres 137.2
2302 Female, age 91, both hemispheres 133.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 153.1
2840 Female, age 85, both hemispheres 169.1
2456 Female, age 91, both hemispheres 167.8
2359 Male, age 61, both hemispheres 161.3
2161 Male, age 80, both hemispheres 155.0
1959 Male, age 76, both hemispheres 145.5
2449 Male, age 74, both hemispheres 119.8

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 251.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 212.9
FF:10165-103B3 76 years, female 277.0
FF:10182-103D2 60 years, female 148.9
Medulla oblongata
Scaled Tags Per Million: 208.7
FF:10038-101F2 18-64 years, mixed 324.5
FF:10155-103A2 76 years, female 226.4
FF:10174-103C3 60 years, female 75.4
Pons
Scaled Tags Per Million: 251.2
FF:10033-101E6 18-54 years, mixed 251.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 128.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 128.2
Samples: 4

Max nTPM: 142.6
Min nTPM: 97.6
Sample A Female 135.2
Sample B Female 97.6
Sample C Male 142.6
Sample D Male 137.5
Pons
nTPM: 88.3
Samples: 4

Max nTPM: 123.5
Min nTPM: 64.3
Sample A Female 83.2
Sample B Female 64.3
Sample C Male 82.0
Sample D Male 123.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 40.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 40.4
Samples: 4

Max nTPM: 45.7
Min nTPM: 36.9
Sample A Male 45.7
Sample B Male 40.1
Sample C Female 36.9
Sample D Female 38.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.2
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.2
79556652 Antisense, RP_071204_01_A09, Mouse strain C57BL/6J (56 days, male) 6.2
75694718 Antisense, RP_060518_03_H03, Mouse strain C57BL/6J (56 days, male) 4.2
Pons
Expression energy: 4.5
79556652 Antisense, RP_071204_01_A09, Mouse strain C57BL/6J (56 days, male) 5.0
75694718 Antisense, RP_060518_03_H03, Mouse strain C57BL/6J (56 days, male) 4.1

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