PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:106.6 nTPM
FANTOM5:131.2 Scaled Tags Per Million
Pig:49.9 nTPM
Mouse:7.9 nTPM
Allen mouse:1.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 106.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 84.7
2090 Male, age 80, both hemispheres 99.3
2188 Female, age 91, both hemispheres 91.3
2301 Female, age 85, both hemispheres 81.6
1984 Male, age 76, both hemispheres 66.7
Area postrema
nTPM: 106.6
2306 Male, age 80, both hemispheres 112.2
2799 Male, age 61, both hemispheres 111.2
2054 Male, age 76, both hemispheres 96.5
Dorsal cochlear nucleus
nTPM: 97.7
2802 Male, age 74, right hemisphere 112.3
2378 Male, age 80, both hemispheres 104.9
2058 Male, age 76, both hemispheres 94.7
2370 Male, age 61, both hemispheres 90.9
2187 Female, age 91, both hemispheres 85.8
Dorsal medullary reticular nucleus
nTPM: 84.2
2373 Male, age 61, both hemispheres 92.9
2088 Male, age 76, both hemispheres 89.0
2040 Female, age 85, both hemispheres 70.5
Dorsal motor vagal complex
nTPM: 83.3
2797 Male, age 61, both hemispheres 104.6
2185 Male, age 76, both hemispheres 101.8
2643 Male, age 74, both hemispheres 101.3
2807 Female, age 85, both hemispheres 89.6
2133 Female, age 91, both hemispheres 69.2
2844 Male, age 55, unknown 68.9
2813 Female, age 72, unknown 67.3
2000 Male, age 74, unknown 63.9
Dorsal tegmental nucleus
nTPM: 100.4
2358 Male, age 61, both hemispheres 138.8
2326 Male, age 74, both hemispheres 92.4
2083 Male, age 80, both hemispheres 91.9
1936 Male, age 76, left hemisphere 78.4
Dorsolateral tegmental area
nTPM: 87.8
2337 Male, age 61, both hemispheres 137.3
2654 Male, age 80, both hemispheres 88.4
2751 Female, age 85, both hemispheres 74.6
2141 Male, age 76, both hemispheres 71.8
2360 Male, age 74, both hemispheres 66.9
Gigantocellular reticular nuclei, medullary
nTPM: 86.2
2310 Male, age 80, both hemispheres 94.3
2387 Female, age 91, both hemispheres 93.2
2314 Male, age 61, both hemispheres 91.4
2022 Male, age 76, right hemisphere 85.5
2462 Male, age 74, both hemispheres 78.2
1876 Female, age 85, both hemispheres 74.8
Gigantocellular reticular nuclei, pars
nTPM: 89.2
2330 Male, age 80, both hemispheres 105.7
2706 Male, age 80, both hemispheres 102.6
2336 Male, age 61, both hemispheres 93.8
2084 Female, age 85, both hemispheres 74.6
2168 Male, age 76, both hemispheres 69.3
Inferior olive
nTPM: 96.7
2379 Male, age 80, both hemispheres 108.4
2178 Male, age 61, both hemispheres 102.7
2628 Female, age 91, both hemispheres 100.3
2085 Female, age 85, both hemispheres 86.3
2563 Male, age 74, both hemispheres 86.0
Kolliker-Fuse nucleus
nTPM: 87.1
2315 Male, age 76, right hemisphere 92.6
2163 Male, age 80, both hemispheres 85.9
2793 Female, age 91, left hemisphere 82.9
Lateral lemniscal nuclei
nTPM: 68.3
2453 Male, age 74, right hemisphere 88.0
2320 Female, age 91, left hemisphere 75.0
2746 Female, age 85, left hemisphere 72.5
2169 Male, age 76, both hemispheres 70.0
2036 Male, age 80, both hemispheres 35.9
Lateral medullary reticular nucleus
nTPM: 83.6
2374 Male, age 61, both hemispheres 94.0
2852 Male, age 80, both hemispheres 93.6
2190 Female, age 85, both hemispheres 83.9
2044 Male, age 76, both hemispheres 81.4
2804 Female, age 91, both hemispheres 74.8
2305 Male, age 74, both hemispheres 73.8
Lateral parabrachial nucleus
nTPM: 80.9
2792 Male, age 76, both hemispheres 96.4
2790 Male, age 61, both hemispheres 83.6
2013 Male, age 80, both hemispheres 75.5
2139 Female, age 85, right hemisphere 68.0
Lateral vestibular nucleus
nTPM: 89.1
2311 Male, age 80, both hemispheres 90.4
2184 Male, age 76, both hemispheres 87.8
Locus coeruleus
nTPM: 62.1
2720 Male, age 74, both hemispheres 78.8
1980 Male, age 76, both hemispheres 69.3
2123 Female, age 91, both hemispheres 63.6
2317 Female, age 72, unknown 63.2
2162 Male, age 80, both hemispheres 60.7
2788 Male, age 74, unknown 52.4
2014 Male, age 55, unknown 46.6
Medial olivary nucleus
nTPM: 93.1
2851 Male, age 80, both hemispheres 109.1
1962 Male, age 76, both hemispheres 93.5
1943 Male, age 61, both hemispheres 91.2
2138 Female, age 91, both hemispheres 78.3
Medial parabrachial nucleus
nTPM: 84.4
2156 Male, age 61, both hemispheres 94.7
2786 Male, age 76, both hemispheres 88.6
2170 Female, age 91, both hemispheres 84.7
2854 Male, age 80, both hemispheres 84.1
2463 Female, age 85, right hemisphere 70.0
Medial periolivary nuclei
nTPM: 77.9
2081 Male, age 80, both hemispheres 93.8
2458 Female, age 91, both hemispheres 89.3
2063 Male, age 76, both hemispheres 71.6
2171 Female, age 85, both hemispheres 70.2
2791 Male, age 74, right hemisphere 64.6
Medial vestibular nucleus
nTPM: 83.0
2624 Male, age 61, both hemispheres 106.5
2134 Male, age 76, both hemispheres 97.0
2093 Male, age 80, both hemispheres 82.0
2801 Male, age 74, both hemispheres 73.5
2803 Female, age 91, both hemispheres 71.3
2743 Female, age 85, both hemispheres 67.8
Motor facial nucleus
nTPM: 80.4
2795 Female, age 91, both hemispheres 94.2
2697 Female, age 85, both hemispheres 86.0
2126 Male, age 61, both hemispheres 83.0
2327 Male, age 80, both hemispheres 75.1
2365 Male, age 74, right hemisphere 74.8
2062 Male, age 76, both hemispheres 69.0
Motor hypoglossal nucleus
nTPM: 82.3
2182 Male, age 80, both hemispheres 93.8
2277 Male, age 76, both hemispheres 90.6
2461 Male, age 61, both hemispheres 76.6
2132 Female, age 85, both hemispheres 75.9
2125 Female, age 91, both hemispheres 74.6
Motor trigeminal nucleus
nTPM: 90.1
2335 Male, age 61, both hemispheres 103.4
2321 Female, age 91, both hemispheres 91.4
2560 Male, age 74, both hemispheres 91.1
2309 Male, age 76, both hemispheres 87.2
2079 Male, age 80, both hemispheres 77.1
Nuclei of the trapezoid body
nTPM: 68.9
2166 Male, age 80, both hemispheres 75.7
2368 Female, age 91, both hemispheres 73.1
1983 Male, age 76, both hemispheres 72.7
2735 Female, age 85, both hemispheres 63.8
2159 Male, age 61, both hemispheres 59.4
Nucleus ambiguus
nTPM: 90.5
2096 Female, age 85, both hemispheres 92.0
2071 Male, age 76, both hemispheres 88.9
Nucleus cuneatus
nTPM: 92.5
2805 Female, age 91, both hemispheres 103.7
2564 Male, age 74, both hemispheres 98.5
2808 Female, age 85, both hemispheres 97.2
2131 Male, age 76, both hemispheres 92.1
2380 Male, age 80, both hemispheres 91.3
2376 Male, age 61, both hemispheres 90.9
2100 Male, age 76, both hemispheres 90.0
2562 Male, age 61, both hemispheres 86.0
2381 Male, age 80, both hemispheres 82.8
Nucleus gracilis
nTPM: 98.3
2299 Female, age 85, both hemispheres 110.2
2382 Male, age 80, both hemispheres 93.3
2627 Male, age 74, both hemispheres 91.4
Nucleus raphe magnus
nTPM: 74.4
2051 Male, age 76, both hemispheres 84.6
2328 Male, age 80, both hemispheres 78.2
2459 Female, age 91, both hemispheres 76.3
2455 Male, age 74, both hemispheres 74.9
2172 Female, age 85, both hemispheres 69.7
2160 Male, age 61, both hemispheres 62.6
Nucleus raphe obscurus
nTPM: 88.6
2845 Female, age 85, midline 91.2
2142 Male, age 76, midline 90.6
2800 Male, age 61, midline 84.2
Nucleus raphe pallidus
nTPM: 98.8
2183 Male, age 80, midline 103.0
1924 Male, age 61, midline 98.1
2145 Male, age 76, midline 95.3
Nucleus tractus solitarii
nTPM: 73.1
2307 Male, age 80, both hemispheres 87.2
2656 Male, age 76, both hemispheres 82.4
2191 Female, age 85, both hemispheres 73.3
2144 Female, age 91, right hemisphere 49.7
Paramedian reticular nucleus
nTPM: 78.0
2052 Male, age 76, both hemispheres 89.8
2313 Male, age 61, both hemispheres 79.4
2057 Male, age 80, both hemispheres 75.4
2050 Female, age 85, both hemispheres 67.6
Parvicellular reticular nuclei
nTPM: 89.9
2119 Male, age 80, both hemispheres 95.0
2095 Male, age 76, both hemispheres 88.0
2558 Male, age 74, both hemispheres 86.9
Parvicellular reticular nuclei, medullary
nTPM: 78.3
2091 Female, age 85, both hemispheres 82.3
2189 Female, age 91, both hemispheres 76.6
2181 Male, age 80, left hemisphere 76.0
Pedunculopontine tegmental nucleus
nTPM: 81.2
2338 Male, age 61, both hemispheres 112.0
2334 Male, age 80, both hemispheres 80.2
1921 Female, age 85, both hemispheres 51.3
Peritrigeminal nucleus
nTPM: 85.5
2136 Male, age 76, both hemispheres 91.0
2067 Female, age 85, both hemispheres 85.9
2179 Male, age 61, both hemispheres 79.7
Pontine nuclei
nTPM: 76.9
2115 Male, age 80, left hemisphere 92.1
2319 Female, age 91, both hemispheres 88.6
2454 Male, age 74, left hemisphere 80.0
2109 Female, age 72, unknown 78.5
2787 Female, age 85, both hemispheres 76.4
1968 Male, age 76, left hemisphere 71.6
1863 Male, age 55, unknown 71.1
2727 Male, age 61, right hemisphere 56.8
Pontine raphe nucleus
nTPM: 67.6
2853 Male, age 76, midline 68.3
2122 Female, age 85, midline 66.8
Posteroventral cochlear nucleus
nTPM: 92.5
2135 Female, age 91, both hemispheres 107.9
2341 Male, age 80, both hemispheres 106.0
2070 Male, age 76, both hemispheres 96.1
2371 Male, age 61, both hemispheres 92.0
2752 Female, age 85, both hemispheres 60.3
Prepositus hypoglossal nucleus
nTPM: 83.9
2086 Male, age 80, both hemispheres 95.7
2855 Female, age 85, right hemisphere 72.2
Principal sensory trigeminal nucleus
nTPM: 73.8
2324 Male, age 76, both hemispheres 84.8
2367 Female, age 91, left hemisphere 83.6
2158 Male, age 61, both hemispheres 67.3
2008 Male, age 80, left hemisphere 59.4
Reticular pontine nucleus, caudal
nTPM: 83.4
2559 Male, age 74, both hemispheres 94.7
2457 Female, age 91, both hemispheres 86.2
2092 Male, age 76, both hemispheres 81.2
2332 Male, age 80, right hemisphere 71.6
Reticular pontine nucleus, oral
nTPM: 74.4
2366 Female, age 91, both hemispheres 84.7
1939 Male, age 80, both hemispheres 82.9
2167 Male, age 76, both hemispheres 77.6
2361 Male, age 74, both hemispheres 64.2
2012 Female, age 85, both hemispheres 62.6
Reticulotegmental nucleus
nTPM: 93.2
2452 Male, age 74, both hemispheres 108.2
2333 Male, age 80, both hemispheres 97.3
2322 Female, age 91, both hemispheres 90.1
2325 Male, age 76, both hemispheres 77.1
Spinal trigeminal nucleus, caudal
nTPM: 82.1
2447 Male, age 76, both hemispheres 86.2
2642 Male, age 74, both hemispheres 82.7
2308 Male, age 80, both hemispheres 82.3
2312 Male, age 61, both hemispheres 80.2
2390 Female, age 91, both hemispheres 79.0
Spinal trigeminal nucleus, interpolar
nTPM: 78.8
2625 Male, age 61, both hemispheres 92.2
2033 Male, age 80, both hemispheres 83.7
2066 Male, age 76, right hemisphere 79.0
2389 Female, age 91, both hemispheres 77.0
2386 Female, age 85, both hemispheres 61.9
Spinal trigeminal nucleus, oral
nTPM: 81.4
2164 Male, age 80, both hemispheres 105.7
1978 Male, age 76, both hemispheres 80.8
2737 Female, age 85, both hemispheres 57.6
Spinal vestibular nucleus
nTPM: 86.9
2796 Male, age 61, both hemispheres 105.2
2748 Male, age 76, both hemispheres 98.0
2384 Male, age 74, both hemispheres 91.7
2780 Male, age 80, both hemispheres 87.1
2186 Female, age 91, both hemispheres 72.4
2806 Female, age 85, both hemispheres 66.9
Subcoeruleus area
nTPM: 79.7
2451 Male, age 74, both hemispheres 96.0
2369 Female, age 85, left hemisphere 81.5
2089 Male, age 76, left hemisphere 76.7
2323 Female, age 91, left hemisphere 76.4
1958 Male, age 80, both hemispheres 67.8
Superior olive
nTPM: 73.8
2561 Female, age 91, both hemispheres 84.9
2329 Male, age 80, right hemisphere 79.0
2020 Male, age 76, both hemispheres 72.7
2364 Male, age 74, right hemisphere 72.2
1875 Female, age 85, both hemispheres 60.3
Superior vestibular nucleus
nTPM: 75.1
2061 Male, age 76, both hemispheres 85.3
2015 Male, age 80, both hemispheres 79.6
2383 Male, age 74, both hemispheres 60.5
Ventral medullary reticular nucleus
nTPM: 88.1
2060 Male, age 76, both hemispheres 92.1
2372 Male, age 61, both hemispheres 84.0
Ventral periolivary nuclei
nTPM: 73.4
2794 Female, age 91, left hemisphere 81.1
2130 Female, age 85, both hemispheres 71.2
2165 Male, age 80, both hemispheres 70.9
2023 Male, age 76, both hemispheres 70.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 89.2
2118 Male, age 80, both hemispheres 104.0
2180 Male, age 61, both hemispheres 89.9
1986 Male, age 76, both hemispheres 88.2
2302 Female, age 91, both hemispheres 83.7
2741 Female, age 85, both hemispheres 80.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 85.3
2161 Male, age 80, both hemispheres 92.5
2456 Female, age 91, both hemispheres 90.6
2359 Male, age 61, both hemispheres 90.5
2840 Female, age 85, both hemispheres 83.6
2449 Male, age 74, both hemispheres 77.7
1959 Male, age 76, both hemispheres 77.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 131.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 106.4
FF:10182-103D2 60 years, female 106.9
FF:10165-103B3 76 years, female 106.0
Medulla oblongata
Scaled Tags Per Million: 131.2
FF:10038-101F2 18-64 years, mixed 180.1
FF:10155-103A2 76 years, female 122.3
FF:10174-103C3 60 years, female 91.2
Pons
Scaled Tags Per Million: 108.7
FF:10033-101E6 18-54 years, mixed 108.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 49.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 49.9
Samples: 4

Max nTPM: 54.6
Min nTPM: 44.9
Sample A Female 44.9
Sample B Female 46.6
Sample C Male 54.6
Sample D Male 53.6
Pons
nTPM: 40.5
Samples: 4

Max nTPM: 52.1
Min nTPM: 33.8
Sample A Female 52.1
Sample B Female 34.7
Sample C Male 33.8
Sample D Male 41.3

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 7.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 7.9
Samples: 4

Max nTPM: 8.7
Min nTPM: 7.3
Sample A Male 8.7
Sample B Male 7.7
Sample C Female 8.0
Sample D Female 7.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.3
69781983 Antisense, RP_050505_02_A07, Mouse strain C57BL/6J (56 days, male) 1.3
Pons
Expression energy: 0.7
69781983 Antisense, RP_050505_02_A07, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org