PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:27.1 nTPM
FANTOM5:30.3 Scaled Tags Per Million
Mouse:71.9 nTPM
Allen mouse:5.5 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 27.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 23.9
2188 Female, age 91, both hemispheres 25.3
2301 Female, age 85, both hemispheres 25.0
2090 Male, age 80, both hemispheres 24.2
1984 Male, age 76, both hemispheres 21.1
Area postrema
nTPM: 21.8
2054 Male, age 76, both hemispheres 24.2
2799 Male, age 61, both hemispheres 22.5
2306 Male, age 80, both hemispheres 18.5
Dorsal cochlear nucleus
nTPM: 21.7
2187 Female, age 91, both hemispheres 24.1
2370 Male, age 61, both hemispheres 23.7
2378 Male, age 80, both hemispheres 23.1
2058 Male, age 76, both hemispheres 19.7
2802 Male, age 74, right hemisphere 18.1
Dorsal medullary reticular nucleus
nTPM: 22.5
2040 Female, age 85, both hemispheres 29.1
2373 Male, age 61, both hemispheres 21.2
2088 Male, age 76, both hemispheres 17.2
Dorsal motor vagal complex
nTPM: 20.8
2813 Female, age 72, unknown 23.4
2000 Male, age 74, unknown 21.1
2807 Female, age 85, both hemispheres 21.1
2185 Male, age 76, both hemispheres 20.7
2797 Male, age 61, both hemispheres 20.7
2133 Female, age 91, both hemispheres 20.3
2844 Male, age 55, unknown 19.8
2643 Male, age 74, both hemispheres 19.6
Dorsal tegmental nucleus
nTPM: 24.2
2326 Male, age 74, both hemispheres 28.3
1936 Male, age 76, left hemisphere 24.7
2083 Male, age 80, both hemispheres 24.6
2358 Male, age 61, both hemispheres 19.3
Dorsolateral tegmental area
nTPM: 24.2
2654 Male, age 80, both hemispheres 27.0
2751 Female, age 85, both hemispheres 25.5
2141 Male, age 76, both hemispheres 23.8
2360 Male, age 74, both hemispheres 23.5
2337 Male, age 61, both hemispheres 21.1
Gigantocellular reticular nuclei, medullary
nTPM: 23.8
1876 Female, age 85, both hemispheres 30.2
2022 Male, age 76, right hemisphere 26.3
2387 Female, age 91, both hemispheres 26.2
2314 Male, age 61, both hemispheres 23.2
2462 Male, age 74, both hemispheres 18.5
2310 Male, age 80, both hemispheres 18.3
Gigantocellular reticular nuclei, pars
nTPM: 23.2
2336 Male, age 61, both hemispheres 25.4
2706 Male, age 80, both hemispheres 24.4
2084 Female, age 85, both hemispheres 23.4
2168 Male, age 76, both hemispheres 22.0
2330 Male, age 80, both hemispheres 20.8
Inferior olive
nTPM: 22.3
2178 Male, age 61, both hemispheres 24.7
2379 Male, age 80, both hemispheres 23.0
2085 Female, age 85, both hemispheres 22.3
2563 Male, age 74, both hemispheres 21.9
2628 Female, age 91, both hemispheres 19.7
Kolliker-Fuse nucleus
nTPM: 24.0
2793 Female, age 91, left hemisphere 25.3
2163 Male, age 80, both hemispheres 25.1
2315 Male, age 76, right hemisphere 21.7
Lateral lemniscal nuclei
nTPM: 24.0
2036 Male, age 80, both hemispheres 28.1
2746 Female, age 85, left hemisphere 27.0
2169 Male, age 76, both hemispheres 23.3
2320 Female, age 91, left hemisphere 22.1
2453 Male, age 74, right hemisphere 19.6
Lateral medullary reticular nucleus
nTPM: 26.0
2305 Male, age 74, both hemispheres 28.7
2044 Male, age 76, both hemispheres 26.6
2190 Female, age 85, both hemispheres 26.4
2852 Male, age 80, both hemispheres 26.3
2804 Female, age 91, both hemispheres 24.1
2374 Male, age 61, both hemispheres 23.8
Lateral parabrachial nucleus
nTPM: 24.4
2013 Male, age 80, both hemispheres 26.6
2792 Male, age 76, both hemispheres 24.7
2790 Male, age 61, both hemispheres 23.4
2139 Female, age 85, right hemisphere 22.8
Lateral vestibular nucleus
nTPM: 20.9
2184 Male, age 76, both hemispheres 21.2
2311 Male, age 80, both hemispheres 20.6
Locus coeruleus
nTPM: 22.3
2788 Male, age 74, unknown 29.2
2014 Male, age 55, unknown 24.7
2123 Female, age 91, both hemispheres 22.1
2162 Male, age 80, both hemispheres 21.6
2317 Female, age 72, unknown 20.9
1980 Male, age 76, both hemispheres 20.1
2720 Male, age 74, both hemispheres 17.4
Medial olivary nucleus
nTPM: 26.3
1943 Male, age 61, both hemispheres 31.4
1962 Male, age 76, both hemispheres 27.1
2851 Male, age 80, both hemispheres 24.2
2138 Female, age 91, both hemispheres 22.5
Medial parabrachial nucleus
nTPM: 23.9
2786 Male, age 76, both hemispheres 26.4
2854 Male, age 80, both hemispheres 26.3
2170 Female, age 91, both hemispheres 24.6
2156 Male, age 61, both hemispheres 21.3
2463 Female, age 85, right hemisphere 20.9
Medial periolivary nuclei
nTPM: 24.5
2791 Male, age 74, right hemisphere 28.4
2063 Male, age 76, both hemispheres 25.5
2171 Female, age 85, both hemispheres 24.5
2081 Male, age 80, both hemispheres 22.2
2458 Female, age 91, both hemispheres 22.1
Medial vestibular nucleus
nTPM: 25.2
2803 Female, age 91, both hemispheres 29.8
2801 Male, age 74, both hemispheres 27.9
2624 Male, age 61, both hemispheres 26.7
2093 Male, age 80, both hemispheres 23.1
2743 Female, age 85, both hemispheres 22.8
2134 Male, age 76, both hemispheres 20.8
Motor facial nucleus
nTPM: 22.3
2697 Female, age 85, both hemispheres 26.4
2365 Male, age 74, right hemisphere 26.0
2126 Male, age 61, both hemispheres 23.9
2062 Male, age 76, both hemispheres 19.8
2795 Female, age 91, both hemispheres 19.3
2327 Male, age 80, both hemispheres 18.4
Motor hypoglossal nucleus
nTPM: 21.4
2125 Female, age 91, both hemispheres 25.5
2132 Female, age 85, both hemispheres 22.1
2182 Male, age 80, both hemispheres 20.4
2461 Male, age 61, both hemispheres 20.1
2277 Male, age 76, both hemispheres 19.1
Motor trigeminal nucleus
nTPM: 22.5
2309 Male, age 76, both hemispheres 24.9
2560 Male, age 74, both hemispheres 23.5
2079 Male, age 80, both hemispheres 23.2
2335 Male, age 61, both hemispheres 21.6
2321 Female, age 91, both hemispheres 19.4
Nuclei of the trapezoid body
nTPM: 23.6
2735 Female, age 85, both hemispheres 26.0
2159 Male, age 61, both hemispheres 24.9
1983 Male, age 76, both hemispheres 23.9
2166 Male, age 80, both hemispheres 23.0
2368 Female, age 91, both hemispheres 20.2
Nucleus ambiguus
nTPM: 17.3
2071 Male, age 76, both hemispheres 21.4
2096 Female, age 85, both hemispheres 13.2
Nucleus cuneatus
nTPM: 20.8
2381 Male, age 80, both hemispheres 24.4
2380 Male, age 80, both hemispheres 23.8
2376 Male, age 61, both hemispheres 23.6
2808 Female, age 85, both hemispheres 22.8
2562 Male, age 61, both hemispheres 20.8
2564 Male, age 74, both hemispheres 19.9
2131 Male, age 76, both hemispheres 18.1
2100 Male, age 76, both hemispheres 17.6
2805 Female, age 91, both hemispheres 16.3
Nucleus gracilis
nTPM: 21.5
2627 Male, age 74, both hemispheres 26.0
2382 Male, age 80, both hemispheres 23.9
2299 Female, age 85, both hemispheres 14.6
Nucleus raphe magnus
nTPM: 23.4
2051 Male, age 76, both hemispheres 26.2
2455 Male, age 74, both hemispheres 25.7
2160 Male, age 61, both hemispheres 24.9
2172 Female, age 85, both hemispheres 22.6
2459 Female, age 91, both hemispheres 21.4
2328 Male, age 80, both hemispheres 19.5
Nucleus raphe obscurus
nTPM: 25.6
2845 Female, age 85, midline 26.7
2142 Male, age 76, midline 26.6
2800 Male, age 61, midline 23.5
Nucleus raphe pallidus
nTPM: 26.8
1924 Male, age 61, midline 28.7
2145 Male, age 76, midline 27.4
2183 Male, age 80, midline 24.3
Nucleus tractus solitarii
nTPM: 20.3
2144 Female, age 91, right hemisphere 24.5
2191 Female, age 85, both hemispheres 20.9
2656 Male, age 76, both hemispheres 18.7
2307 Male, age 80, both hemispheres 17.0
Paramedian reticular nucleus
nTPM: 27.1
2052 Male, age 76, both hemispheres 35.2
2050 Female, age 85, both hemispheres 29.1
2057 Male, age 80, both hemispheres 22.0
2313 Male, age 61, both hemispheres 22.0
Parvicellular reticular nuclei
nTPM: 23.2
2095 Male, age 76, both hemispheres 24.3
2119 Male, age 80, both hemispheres 23.9
2558 Male, age 74, both hemispheres 21.3
Parvicellular reticular nuclei, medullary
nTPM: 20.4
2189 Female, age 91, both hemispheres 23.7
2091 Female, age 85, both hemispheres 19.1
2181 Male, age 80, left hemisphere 18.5
Pedunculopontine tegmental nucleus
nTPM: 26.6
2338 Male, age 61, both hemispheres 29.0
1921 Female, age 85, both hemispheres 27.9
2334 Male, age 80, both hemispheres 22.8
Peritrigeminal nucleus
nTPM: 23.0
2136 Male, age 76, both hemispheres 25.4
2179 Male, age 61, both hemispheres 24.1
2067 Female, age 85, both hemispheres 19.6
Pontine nuclei
nTPM: 25.1
2319 Female, age 91, both hemispheres 28.2
1863 Male, age 55, unknown 27.7
2727 Male, age 61, right hemisphere 26.7
2454 Male, age 74, left hemisphere 26.0
2109 Female, age 72, unknown 24.5
2787 Female, age 85, both hemispheres 23.5
2115 Male, age 80, left hemisphere 22.3
1968 Male, age 76, left hemisphere 21.7
Pontine raphe nucleus
nTPM: 24.5
2853 Male, age 76, midline 25.7
2122 Female, age 85, midline 23.2
Posteroventral cochlear nucleus
nTPM: 23.9
2341 Male, age 80, both hemispheres 29.1
2135 Female, age 91, both hemispheres 25.3
2371 Male, age 61, both hemispheres 24.0
2752 Female, age 85, both hemispheres 22.7
2070 Male, age 76, both hemispheres 18.4
Prepositus hypoglossal nucleus
nTPM: 21.8
2855 Female, age 85, right hemisphere 24.3
2086 Male, age 80, both hemispheres 19.3
Principal sensory trigeminal nucleus
nTPM: 24.9
2008 Male, age 80, left hemisphere 26.8
2158 Male, age 61, both hemispheres 25.8
2367 Female, age 91, left hemisphere 25.7
2324 Male, age 76, both hemispheres 21.2
Reticular pontine nucleus, caudal
nTPM: 25.0
2559 Male, age 74, both hemispheres 30.5
2092 Male, age 76, both hemispheres 24.7
2332 Male, age 80, right hemisphere 23.8
2457 Female, age 91, both hemispheres 21.2
Reticular pontine nucleus, oral
nTPM: 24.8
2012 Female, age 85, both hemispheres 30.5
1939 Male, age 80, both hemispheres 26.8
2366 Female, age 91, both hemispheres 26.7
2167 Male, age 76, both hemispheres 23.8
2361 Male, age 74, both hemispheres 16.3
Reticulotegmental nucleus
nTPM: 22.0
2322 Female, age 91, both hemispheres 24.4
2325 Male, age 76, both hemispheres 22.8
2333 Male, age 80, both hemispheres 22.3
2452 Male, age 74, both hemispheres 18.6
Spinal trigeminal nucleus, caudal
nTPM: 22.8
2312 Male, age 61, both hemispheres 26.0
2390 Female, age 91, both hemispheres 23.2
2308 Male, age 80, both hemispheres 22.0
2642 Male, age 74, both hemispheres 22.0
2447 Male, age 76, both hemispheres 20.6
Spinal trigeminal nucleus, interpolar
nTPM: 24.7
2389 Female, age 91, both hemispheres 29.3
2033 Male, age 80, both hemispheres 24.1
2066 Male, age 76, right hemisphere 23.9
2386 Female, age 85, both hemispheres 23.8
2625 Male, age 61, both hemispheres 22.4
Spinal trigeminal nucleus, oral
nTPM: 24.0
2737 Female, age 85, both hemispheres 26.6
1978 Male, age 76, both hemispheres 24.0
2164 Male, age 80, both hemispheres 21.2
Spinal vestibular nucleus
nTPM: 24.5
2806 Female, age 85, both hemispheres 28.4
2796 Male, age 61, both hemispheres 25.8
2186 Female, age 91, both hemispheres 25.4
2384 Male, age 74, both hemispheres 23.4
2748 Male, age 76, both hemispheres 22.3
2780 Male, age 80, both hemispheres 22.0
Subcoeruleus area
nTPM: 24.3
2369 Female, age 85, left hemisphere 27.3
2451 Male, age 74, both hemispheres 25.6
2089 Male, age 76, left hemisphere 23.6
1958 Male, age 80, both hemispheres 23.0
2323 Female, age 91, left hemisphere 22.1
Superior olive
nTPM: 24.2
1875 Female, age 85, both hemispheres 27.5
2364 Male, age 74, right hemisphere 24.7
2561 Female, age 91, both hemispheres 23.9
2020 Male, age 76, both hemispheres 23.2
2329 Male, age 80, right hemisphere 21.9
Superior vestibular nucleus
nTPM: 24.8
2383 Male, age 74, both hemispheres 29.2
2061 Male, age 76, both hemispheres 22.9
2015 Male, age 80, both hemispheres 22.4
Ventral medullary reticular nucleus
nTPM: 24.0
2372 Male, age 61, both hemispheres 24.3
2060 Male, age 76, both hemispheres 23.7
Ventral periolivary nuclei
nTPM: 22.3
2023 Male, age 76, both hemispheres 23.6
2165 Male, age 80, both hemispheres 22.4
2794 Female, age 91, left hemisphere 21.8
2130 Female, age 85, both hemispheres 21.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 22.7
2180 Male, age 61, both hemispheres 26.2
1986 Male, age 76, both hemispheres 24.0
2741 Female, age 85, both hemispheres 22.4
2118 Male, age 80, both hemispheres 21.5
2302 Female, age 91, both hemispheres 19.6
Ventrolateral tegmental area, A5 NE cell group
nTPM: 23.5
2840 Female, age 85, both hemispheres 27.3
1959 Male, age 76, both hemispheres 25.4
2456 Female, age 91, both hemispheres 22.9
2359 Male, age 61, both hemispheres 22.7
2449 Male, age 74, both hemispheres 21.7
2161 Male, age 80, both hemispheres 20.7

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 30.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 30.3
FF:10182-103D2 60 years, female 30.8
FF:10165-103B3 76 years, female 29.9
Medulla oblongata
Scaled Tags Per Million: 24.6
FF:10155-103A2 76 years, female 28.4
FF:10174-103C3 60 years, female 27.3
FF:10038-101F2 18-64 years, mixed 18.2
Pons
Scaled Tags Per Million: 23.4
FF:10033-101E6 18-54 years, mixed 23.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 71.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 71.9
Samples: 4

Max nTPM: 75.3
Min nTPM: 69.7
Sample A Male 72.5
Sample B Male 69.7
Sample C Female 75.3
Sample D Female 70.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.5
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 5.5
70543008 Antisense, RP_050329_01_F10, Mouse strain C57BL/6J (56 days, male) 5.5
Pons
Expression energy: 4.4
70543008 Antisense, RP_050329_01_F10, Mouse strain C57BL/6J (56 days, male) 4.4

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