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ITPK1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:160.6 nTPM
FANTOM5:86.7 Scaled Tags Per Million
Pig:26.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA055230
Glial cells Not detected
Neuronal cells Not detected


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

160.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 160.6
Samples: 246

Max nTPM: 281.1
Min nTPM: 72.0
Std nTPM: 33.3
Median nTPM: 158.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 281.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 260.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 256.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 256.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 255.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 248.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 242.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 240.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 234.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 228.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 225.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 220.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 220.5
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 219.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 216.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 216.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 214.7
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 212.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 211.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 211.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 206.4
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 206.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 205.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 205.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 204.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 204.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 203.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 201.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 201.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 201.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 199.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 196.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 196.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 195.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 195.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 192.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 192.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 191.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 190.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 187.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 186.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 186.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 184.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 183.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 183.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 183.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 182.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 182.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 182.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 182.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 181.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 181.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 180.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 180.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 179.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 177.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 177.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 176.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 176.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 176.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 174.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 174.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 174.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 174.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 174.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 173.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 173.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 173.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 173.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 173.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 172.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 172.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 172.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 172.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 171.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 171.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 170.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 169.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 169.8
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 169.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 169.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 169.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 168.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 168.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 167.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 167.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 166.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 166.3
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 166.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 166.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 166.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 165.8
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 165.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 165.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 165.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 165.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 165.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 164.7
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 164.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 164.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 164.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 164.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 163.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 163.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 163.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 163.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 162.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 162.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 162.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 162.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 161.6
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 161.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 160.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 160.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 160.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 160.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 160.0
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 159.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 159.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 158.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 157.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 157.1
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 156.9
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 156.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 156.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 156.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 156.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 156.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 155.8
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 155.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 154.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 154.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 154.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 154.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 153.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 153.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 153.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 153.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 153.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 153.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 152.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 152.3
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 152.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 152.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 151.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 151.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 150.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 150.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 150.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 150.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 150.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 150.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 150.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 149.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 149.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 148.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 148.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 147.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 147.4
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 147.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 146.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 145.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 145.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 145.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 145.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 145.3
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 144.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 144.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 143.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 143.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 143.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 142.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 142.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 141.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 141.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 141.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 140.8
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 140.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 140.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 140.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 140.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 139.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 138.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 138.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 138.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 138.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 138.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 137.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 136.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 135.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 135.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 135.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 134.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 134.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 134.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 133.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 132.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 132.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 131.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 131.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 130.4
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 129.9
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 129.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 129.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 128.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 128.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 127.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 127.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 127.2
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 126.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 126.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 125.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 124.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 124.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 123.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 121.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 120.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 118.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 118.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 118.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 117.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 117.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 117.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 116.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 116.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 115.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 115.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 113.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 111.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 109.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 108.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 106.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 105.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 104.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 100.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 99.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 99.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 96.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 95.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 85.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 72.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

86.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 86.7
FF:10164-103B2 76 years, female 86.7

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

26.7
Pig sample Sample description nTPM
Caudate
nTPM: 26.7
Samples: 4

Max nTPM: 32.0
Min nTPM: 20.7
Sample A Female 20.7
Sample B Female 32.0
Sample C Male 27.5
Sample D Male 26.5

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