PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:14.6 nTPM
FANTOM5:20.9 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:27.4 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 14.6
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 11.0
2188 Female, age 91, both hemispheres 12.8
2090 Male, age 80, both hemispheres 11.9
1984 Male, age 76, both hemispheres 9.9
2301 Female, age 85, both hemispheres 9.4
Area postrema
nTPM: 9.7
2306 Male, age 80, both hemispheres 13.3
2054 Male, age 76, both hemispheres 8.7
2799 Male, age 61, both hemispheres 7.1
Dorsal cochlear nucleus
nTPM: 10.0
2187 Female, age 91, both hemispheres 10.8
2802 Male, age 74, right hemisphere 10.7
2058 Male, age 76, both hemispheres 9.9
2370 Male, age 61, both hemispheres 9.8
2378 Male, age 80, both hemispheres 9.0
Dorsal medullary reticular nucleus
nTPM: 8.4
2088 Male, age 76, both hemispheres 9.8
2040 Female, age 85, both hemispheres 8.0
2373 Male, age 61, both hemispheres 7.3
Dorsal motor vagal complex
nTPM: 11.8
2643 Male, age 74, both hemispheres 15.5
2813 Female, age 72, unknown 14.7
2807 Female, age 85, both hemispheres 12.8
2133 Female, age 91, both hemispheres 12.3
2000 Male, age 74, unknown 11.6
2185 Male, age 76, both hemispheres 11.4
2844 Male, age 55, unknown 10.2
2797 Male, age 61, both hemispheres 5.8
Dorsal tegmental nucleus
nTPM: 10.3
2326 Male, age 74, both hemispheres 11.6
2358 Male, age 61, both hemispheres 11.5
2083 Male, age 80, both hemispheres 10.0
1936 Male, age 76, left hemisphere 8.1
Dorsolateral tegmental area
nTPM: 11.2
2360 Male, age 74, both hemispheres 15.8
2337 Male, age 61, both hemispheres 13.1
2654 Male, age 80, both hemispheres 10.3
2751 Female, age 85, both hemispheres 9.6
2141 Male, age 76, both hemispheres 7.4
Gigantocellular reticular nuclei, medullary
nTPM: 10.8
2462 Male, age 74, both hemispheres 14.2
2022 Male, age 76, right hemisphere 12.5
2310 Male, age 80, both hemispheres 10.6
1876 Female, age 85, both hemispheres 10.5
2387 Female, age 91, both hemispheres 10.3
2314 Male, age 61, both hemispheres 6.4
Gigantocellular reticular nuclei, pars
nTPM: 9.7
2336 Male, age 61, both hemispheres 10.5
2168 Male, age 76, both hemispheres 10.4
2706 Male, age 80, both hemispheres 9.8
2330 Male, age 80, both hemispheres 9.2
2084 Female, age 85, both hemispheres 8.8
Inferior olive
nTPM: 8.7
2563 Male, age 74, both hemispheres 11.7
2628 Female, age 91, both hemispheres 10.2
2379 Male, age 80, both hemispheres 7.9
2085 Female, age 85, both hemispheres 7.6
2178 Male, age 61, both hemispheres 6.0
Kolliker-Fuse nucleus
nTPM: 11.3
2163 Male, age 80, both hemispheres 12.3
2793 Female, age 91, left hemisphere 11.4
2315 Male, age 76, right hemisphere 10.2
Lateral lemniscal nuclei
nTPM: 11.7
2453 Male, age 74, right hemisphere 13.8
2746 Female, age 85, left hemisphere 11.9
2320 Female, age 91, left hemisphere 11.8
2036 Male, age 80, both hemispheres 10.9
2169 Male, age 76, both hemispheres 10.0
Lateral medullary reticular nucleus
nTPM: 10.8
2305 Male, age 74, both hemispheres 18.8
2852 Male, age 80, both hemispheres 10.3
2044 Male, age 76, both hemispheres 9.9
2190 Female, age 85, both hemispheres 9.6
2804 Female, age 91, both hemispheres 9.1
2374 Male, age 61, both hemispheres 6.8
Lateral parabrachial nucleus
nTPM: 11.0
2139 Female, age 85, right hemisphere 14.0
2013 Male, age 80, both hemispheres 13.2
2790 Male, age 61, both hemispheres 8.4
2792 Male, age 76, both hemispheres 8.2
Lateral vestibular nucleus
nTPM: 11.0
2184 Male, age 76, both hemispheres 12.2
2311 Male, age 80, both hemispheres 9.8
Locus coeruleus
nTPM: 10.6
2720 Male, age 74, both hemispheres 12.2
2317 Female, age 72, unknown 12.0
2123 Female, age 91, both hemispheres 11.6
2014 Male, age 55, unknown 11.1
2788 Male, age 74, unknown 10.3
2162 Male, age 80, both hemispheres 9.3
1980 Male, age 76, both hemispheres 8.0
Medial olivary nucleus
nTPM: 10.2
2138 Female, age 91, both hemispheres 11.7
2851 Male, age 80, both hemispheres 10.8
1943 Male, age 61, both hemispheres 10.2
1962 Male, age 76, both hemispheres 8.3
Medial parabrachial nucleus
nTPM: 10.4
2170 Female, age 91, both hemispheres 12.4
2854 Male, age 80, both hemispheres 11.3
2156 Male, age 61, both hemispheres 10.9
2786 Male, age 76, both hemispheres 8.8
2463 Female, age 85, right hemisphere 8.6
Medial periolivary nuclei
nTPM: 11.2
2791 Male, age 74, right hemisphere 14.2
2171 Female, age 85, both hemispheres 13.1
2081 Male, age 80, both hemispheres 10.7
2063 Male, age 76, both hemispheres 10.3
2458 Female, age 91, both hemispheres 7.9
Medial vestibular nucleus
nTPM: 10.6
2801 Male, age 74, both hemispheres 14.3
2803 Female, age 91, both hemispheres 12.4
2743 Female, age 85, both hemispheres 9.7
2134 Male, age 76, both hemispheres 9.6
2093 Male, age 80, both hemispheres 8.9
2624 Male, age 61, both hemispheres 8.5
Motor facial nucleus
nTPM: 10.7
2365 Male, age 74, right hemisphere 18.4
2697 Female, age 85, both hemispheres 10.7
2062 Male, age 76, both hemispheres 9.7
2795 Female, age 91, both hemispheres 9.0
2126 Male, age 61, both hemispheres 8.3
2327 Male, age 80, both hemispheres 7.8
Motor hypoglossal nucleus
nTPM: 10.3
2132 Female, age 85, both hemispheres 11.8
2125 Female, age 91, both hemispheres 11.0
2182 Male, age 80, both hemispheres 10.7
2461 Male, age 61, both hemispheres 10.2
2277 Male, age 76, both hemispheres 7.9
Motor trigeminal nucleus
nTPM: 10.7
2560 Male, age 74, both hemispheres 12.1
2079 Male, age 80, both hemispheres 11.4
2335 Male, age 61, both hemispheres 10.9
2321 Female, age 91, both hemispheres 9.8
2309 Male, age 76, both hemispheres 9.5
Nuclei of the trapezoid body
nTPM: 10.7
2159 Male, age 61, both hemispheres 12.4
2735 Female, age 85, both hemispheres 12.0
1983 Male, age 76, both hemispheres 9.9
2166 Male, age 80, both hemispheres 9.5
2368 Female, age 91, both hemispheres 9.5
Nucleus ambiguus
nTPM: 10.0
2096 Female, age 85, both hemispheres 11.3
2071 Male, age 76, both hemispheres 8.8
Nucleus cuneatus
nTPM: 9.2
2564 Male, age 74, both hemispheres 11.3
2808 Female, age 85, both hemispheres 10.2
2381 Male, age 80, both hemispheres 9.4
2100 Male, age 76, both hemispheres 8.9
2380 Male, age 80, both hemispheres 8.9
2805 Female, age 91, both hemispheres 8.7
2562 Male, age 61, both hemispheres 8.5
2131 Male, age 76, both hemispheres 8.4
2376 Male, age 61, both hemispheres 8.1
Nucleus gracilis
nTPM: 14.6
2627 Male, age 74, both hemispheres 17.9
2299 Female, age 85, both hemispheres 13.7
2382 Male, age 80, both hemispheres 12.2
Nucleus raphe magnus
nTPM: 11.2
2455 Male, age 74, both hemispheres 13.5
2172 Female, age 85, both hemispheres 13.2
2160 Male, age 61, both hemispheres 12.8
2051 Male, age 76, both hemispheres 9.7
2459 Female, age 91, both hemispheres 9.4
2328 Male, age 80, both hemispheres 8.7
Nucleus raphe obscurus
nTPM: 8.2
2845 Female, age 85, midline 9.0
2142 Male, age 76, midline 8.8
2800 Male, age 61, midline 6.9
Nucleus raphe pallidus
nTPM: 10.3
1924 Male, age 61, midline 11.4
2145 Male, age 76, midline 10.8
2183 Male, age 80, midline 8.7
Nucleus tractus solitarii
nTPM: 11.4
2191 Female, age 85, both hemispheres 15.9
2144 Female, age 91, right hemisphere 11.0
2307 Male, age 80, both hemispheres 9.7
2656 Male, age 76, both hemispheres 8.9
Paramedian reticular nucleus
nTPM: 9.1
2050 Female, age 85, both hemispheres 12.0
2313 Male, age 61, both hemispheres 9.1
2052 Male, age 76, both hemispheres 8.8
2057 Male, age 80, both hemispheres 6.6
Parvicellular reticular nuclei
nTPM: 9.1
2558 Male, age 74, both hemispheres 11.5
2095 Male, age 76, both hemispheres 8.3
2119 Male, age 80, both hemispheres 7.6
Parvicellular reticular nuclei, medullary
nTPM: 12.9
2091 Female, age 85, both hemispheres 13.9
2189 Female, age 91, both hemispheres 12.9
2181 Male, age 80, left hemisphere 11.9
Pedunculopontine tegmental nucleus
nTPM: 9.6
2338 Male, age 61, both hemispheres 10.0
2334 Male, age 80, both hemispheres 9.8
1921 Female, age 85, both hemispheres 8.9
Peritrigeminal nucleus
nTPM: 11.9
2067 Female, age 85, both hemispheres 16.2
2179 Male, age 61, both hemispheres 10.4
2136 Male, age 76, both hemispheres 9.0
Pontine nuclei
nTPM: 12.6
2454 Male, age 74, left hemisphere 15.9
2787 Female, age 85, both hemispheres 15.3
2109 Female, age 72, unknown 13.0
2319 Female, age 91, both hemispheres 12.9
1863 Male, age 55, unknown 11.9
2115 Male, age 80, left hemisphere 11.2
1968 Male, age 76, left hemisphere 10.3
2727 Male, age 61, right hemisphere 10.2
Pontine raphe nucleus
nTPM: 8.3
2122 Female, age 85, midline 9.6
2853 Male, age 76, midline 7.1
Posteroventral cochlear nucleus
nTPM: 10.0
2341 Male, age 80, both hemispheres 11.8
2752 Female, age 85, both hemispheres 11.8
2070 Male, age 76, both hemispheres 10.0
2135 Female, age 91, both hemispheres 9.9
2371 Male, age 61, both hemispheres 6.7
Prepositus hypoglossal nucleus
nTPM: 9.3
2086 Male, age 80, both hemispheres 11.0
2855 Female, age 85, right hemisphere 7.7
Principal sensory trigeminal nucleus
nTPM: 10.8
2367 Female, age 91, left hemisphere 11.6
2008 Male, age 80, left hemisphere 10.7
2158 Male, age 61, both hemispheres 10.5
2324 Male, age 76, both hemispheres 10.4
Reticular pontine nucleus, caudal
nTPM: 10.0
2559 Male, age 74, both hemispheres 10.7
2092 Male, age 76, both hemispheres 10.0
2457 Female, age 91, both hemispheres 9.7
2332 Male, age 80, right hemisphere 9.6
Reticular pontine nucleus, oral
nTPM: 9.0
2366 Female, age 91, both hemispheres 10.8
2167 Male, age 76, both hemispheres 10.7
2012 Female, age 85, both hemispheres 9.9
1939 Male, age 80, both hemispheres 8.9
2361 Male, age 74, both hemispheres 4.8
Reticulotegmental nucleus
nTPM: 10.3
2452 Male, age 74, both hemispheres 14.2
2322 Female, age 91, both hemispheres 10.2
2333 Male, age 80, both hemispheres 9.1
2325 Male, age 76, both hemispheres 7.5
Spinal trigeminal nucleus, caudal
nTPM: 12.0
2642 Male, age 74, both hemispheres 15.0
2390 Female, age 91, both hemispheres 14.3
2308 Male, age 80, both hemispheres 10.9
2312 Male, age 61, both hemispheres 10.5
2447 Male, age 76, both hemispheres 9.2
Spinal trigeminal nucleus, interpolar
nTPM: 12.9
2625 Male, age 61, both hemispheres 20.3
2386 Female, age 85, both hemispheres 13.8
2066 Male, age 76, right hemisphere 10.7
2389 Female, age 91, both hemispheres 10.5
2033 Male, age 80, both hemispheres 9.4
Spinal trigeminal nucleus, oral
nTPM: 12.1
2737 Female, age 85, both hemispheres 12.9
2164 Male, age 80, both hemispheres 11.9
1978 Male, age 76, both hemispheres 11.6
Spinal vestibular nucleus
nTPM: 10.3
2186 Female, age 91, both hemispheres 11.9
2384 Male, age 74, both hemispheres 10.8
2780 Male, age 80, both hemispheres 10.8
2796 Male, age 61, both hemispheres 10.0
2806 Female, age 85, both hemispheres 9.3
2748 Male, age 76, both hemispheres 9.0
Subcoeruleus area
nTPM: 9.8
2451 Male, age 74, both hemispheres 12.3
2323 Female, age 91, left hemisphere 10.7
1958 Male, age 80, both hemispheres 9.5
2089 Male, age 76, left hemisphere 9.2
2369 Female, age 85, left hemisphere 7.5
Superior olive
nTPM: 10.9
2364 Male, age 74, right hemisphere 14.2
1875 Female, age 85, both hemispheres 12.8
2020 Male, age 76, both hemispheres 10.0
2561 Female, age 91, both hemispheres 9.0
2329 Male, age 80, right hemisphere 8.5
Superior vestibular nucleus
nTPM: 11.1
2383 Male, age 74, both hemispheres 13.0
2015 Male, age 80, both hemispheres 10.7
2061 Male, age 76, both hemispheres 9.7
Ventral medullary reticular nucleus
nTPM: 8.4
2060 Male, age 76, both hemispheres 10.4
2372 Male, age 61, both hemispheres 6.4
Ventral periolivary nuclei
nTPM: 11.1
2130 Female, age 85, both hemispheres 12.1
2794 Female, age 91, left hemisphere 11.3
2165 Male, age 80, both hemispheres 11.2
2023 Male, age 76, both hemispheres 10.0
Ventrolateral medulla, A1-C1 cell groups
nTPM: 10.7
2741 Female, age 85, both hemispheres 12.1
2118 Male, age 80, both hemispheres 11.2
2302 Female, age 91, both hemispheres 11.2
1986 Male, age 76, both hemispheres 10.2
2180 Male, age 61, both hemispheres 8.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 9.6
2449 Male, age 74, both hemispheres 12.6
2161 Male, age 80, both hemispheres 10.5
2840 Female, age 85, both hemispheres 8.9
1959 Male, age 76, both hemispheres 8.8
2359 Male, age 61, both hemispheres 8.4
2456 Female, age 91, both hemispheres 8.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 17.4
FF:10182-103D2 60 years, female 20.3
FF:10165-103B3 76 years, female 14.4
Medulla oblongata
Scaled Tags Per Million: 15.8
FF:10038-101F2 18-64 years, mixed 20.7
FF:10174-103C3 60 years, female 13.6
FF:10155-103A2 76 years, female 13.1
Pons
Scaled Tags Per Million: 20.9
FF:10033-101E6 18-54 years, mixed 20.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 45.2
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 32.2
Samples: 4

Max nTPM: 34.0
Min nTPM: 29.1
Sample A Female 29.1
Sample B Female 32.0
Sample C Male 34.0
Sample D Male 33.8
Pons
nTPM: 45.2
Samples: 4

Max nTPM: 76.1
Min nTPM: 27.2
Sample A Female 76.1
Sample B Female 27.2
Sample C Male 42.7
Sample D Male 34.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 27.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 27.4
Samples: 4

Max nTPM: 29.7
Min nTPM: 25.1
Sample A Male 25.1
Sample B Male 28.8
Sample C Female 26.1
Sample D Female 29.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
69080734 Antisense, RP_050324_02_D03, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.2
69080734 Antisense, RP_050324_02_D03, Mouse strain C57BL/6J (56 days, male) 0.2

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