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BEX4
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:204.7 nTPM
FANTOM5:567.4 Scaled Tags Per Million
Pig:117.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045105
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

204.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 204.7
Samples: 246

Max nTPM: 455.3
Min nTPM: 96.9
Std nTPM: 63.7
Median nTPM: 201.1
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 455.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 415.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 395.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 369.7
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 368.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 349.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 348.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 313.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 311.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 311.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 310.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 308.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 307.3
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 305.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 304.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 302.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 299.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 298.5
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 297.1
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 293.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 290.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 285.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 284.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 284.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 281.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 280.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 280.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 280.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 279.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 276.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 276.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 274.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 274.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 271.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 268.8
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 268.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 267.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 264.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 264.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 263.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 261.9
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 261.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 259.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 259.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 259.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 257.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 254.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 254.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 253.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 253.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 253.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 253.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 251.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 251.6
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 250.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 250.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 250.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 249.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 248.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 247.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 246.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 246.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 246.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 243.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 242.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 242.4
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 242.0
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 239.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 238.8
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 238.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 238.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 238.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 237.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 237.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 237.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 236.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 236.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 236.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 235.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 235.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 235.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 235.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 234.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 234.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 234.0
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 233.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 233.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 230.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 229.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 229.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 229.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 228.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 228.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 228.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 227.5
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 226.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 226.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 224.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 224.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 224.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 223.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 222.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 221.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 218.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 218.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 217.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 215.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 215.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 214.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 213.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 212.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 211.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 210.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 208.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 207.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 207.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 206.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 206.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 205.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 205.4
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 204.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 201.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 201.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 201.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 200.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 198.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 198.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 197.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 197.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 196.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 195.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 195.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 192.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 192.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 192.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 191.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 190.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 189.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 188.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 188.4
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 187.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 187.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 185.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 184.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 184.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 184.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 183.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 183.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 182.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 182.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 180.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 180.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 179.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 178.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 178.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 177.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 177.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 176.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 176.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 176.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 175.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 174.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 174.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 173.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 172.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 172.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 171.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 171.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 169.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 169.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 169.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 168.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 166.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 166.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 164.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 163.0
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 162.7
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 161.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 161.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 160.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 160.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 160.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 159.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 156.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 155.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 155.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 155.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 154.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 152.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 149.3
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 148.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 146.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 145.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 145.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 145.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 144.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 144.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 142.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 141.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 140.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 139.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 136.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 136.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 135.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 134.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 132.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 132.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 132.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 131.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 129.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 128.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 127.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 126.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 126.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 124.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 123.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 120.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 119.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 119.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 118.6
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 118.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 118.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 117.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 117.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 116.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 115.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 115.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 114.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 114.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 113.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 113.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 113.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 113.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 112.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 112.4
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 111.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 110.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 110.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 107.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 105.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 103.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 103.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 102.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 102.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 96.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

567.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 567.4
FF:10164-103B2 76 years, female 567.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

117.0
Pig sample Sample description nTPM
Caudate
nTPM: 117.0
Samples: 4

Max nTPM: 143.1
Min nTPM: 98.6
Sample A Female 106.4
Sample B Female 119.7
Sample C Male 143.1
Sample D Male 98.6

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