PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:168.0 nTPM
FANTOM5:143.3 Scaled Tags Per Million
Pig:38.7 nTPM
Mouse:26.9 nTPM
Allen mouse:0.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 168.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 139.2
1984 Male, age 76, both hemispheres 164.7
2188 Female, age 91, both hemispheres 142.6
2090 Male, age 80, both hemispheres 126.7
2301 Female, age 85, both hemispheres 122.9
Area postrema
nTPM: 130.5
2306 Male, age 80, both hemispheres 182.0
2799 Male, age 61, both hemispheres 132.4
2054 Male, age 76, both hemispheres 77.1
Dorsal cochlear nucleus
nTPM: 162.2
2370 Male, age 61, both hemispheres 206.4
2378 Male, age 80, both hemispheres 183.3
2802 Male, age 74, right hemisphere 176.6
2187 Female, age 91, both hemispheres 127.4
2058 Male, age 76, both hemispheres 117.1
Dorsal medullary reticular nucleus
nTPM: 136.3
2040 Female, age 85, both hemispheres 152.0
2373 Male, age 61, both hemispheres 145.1
2088 Male, age 76, both hemispheres 111.6
Dorsal motor vagal complex
nTPM: 141.1
2797 Male, age 61, both hemispheres 313.7
2185 Male, age 76, both hemispheres 146.8
2133 Female, age 91, both hemispheres 135.1
2000 Male, age 74, unknown 129.6
2643 Male, age 74, both hemispheres 118.1
2844 Male, age 55, unknown 107.8
2813 Female, age 72, unknown 94.6
2807 Female, age 85, both hemispheres 83.5
Dorsal tegmental nucleus
nTPM: 150.7
2083 Male, age 80, both hemispheres 195.4
1936 Male, age 76, left hemisphere 170.1
2326 Male, age 74, both hemispheres 125.1
2358 Male, age 61, both hemispheres 112.4
Dorsolateral tegmental area
nTPM: 137.3
2654 Male, age 80, both hemispheres 190.5
2751 Female, age 85, both hemispheres 162.6
2337 Male, age 61, both hemispheres 125.7
2141 Male, age 76, both hemispheres 107.7
2360 Male, age 74, both hemispheres 100.0
Gigantocellular reticular nuclei, medullary
nTPM: 140.3
2022 Male, age 76, right hemisphere 157.3
2314 Male, age 61, both hemispheres 150.6
2387 Female, age 91, both hemispheres 150.1
1876 Female, age 85, both hemispheres 149.8
2310 Male, age 80, both hemispheres 124.9
2462 Male, age 74, both hemispheres 109.2
Gigantocellular reticular nuclei, pars
nTPM: 136.0
2336 Male, age 61, both hemispheres 172.4
2084 Female, age 85, both hemispheres 150.1
2706 Male, age 80, both hemispheres 124.0
2330 Male, age 80, both hemispheres 123.0
2168 Male, age 76, both hemispheres 110.7
Inferior olive
nTPM: 150.9
2085 Female, age 85, both hemispheres 159.9
2563 Male, age 74, both hemispheres 159.1
2178 Male, age 61, both hemispheres 158.2
2628 Female, age 91, both hemispheres 156.2
2379 Male, age 80, both hemispheres 121.1
Kolliker-Fuse nucleus
nTPM: 133.8
2793 Female, age 91, left hemisphere 167.5
2163 Male, age 80, both hemispheres 125.7
2315 Male, age 76, right hemisphere 108.2
Lateral lemniscal nuclei
nTPM: 150.7
2320 Female, age 91, left hemisphere 189.7
2036 Male, age 80, both hemispheres 155.1
2169 Male, age 76, both hemispheres 138.8
2453 Male, age 74, right hemisphere 136.5
2746 Female, age 85, left hemisphere 133.3
Lateral medullary reticular nucleus
nTPM: 127.2
2852 Male, age 80, both hemispheres 162.8
2374 Male, age 61, both hemispheres 143.4
2305 Male, age 74, both hemispheres 133.0
2190 Female, age 85, both hemispheres 113.9
2804 Female, age 91, both hemispheres 105.5
2044 Male, age 76, both hemispheres 104.4
Lateral parabrachial nucleus
nTPM: 132.0
2013 Male, age 80, both hemispheres 166.4
2792 Male, age 76, both hemispheres 156.8
2139 Female, age 85, right hemisphere 125.0
2790 Male, age 61, both hemispheres 79.8
Lateral vestibular nucleus
nTPM: 120.1
2184 Male, age 76, both hemispheres 126.2
2311 Male, age 80, both hemispheres 114.0
Locus coeruleus
nTPM: 116.1
2317 Female, age 72, unknown 128.9
2123 Female, age 91, both hemispheres 124.6
2162 Male, age 80, both hemispheres 119.1
2720 Male, age 74, both hemispheres 118.8
2014 Male, age 55, unknown 117.7
1980 Male, age 76, both hemispheres 114.4
2788 Male, age 74, unknown 89.4
Medial olivary nucleus
nTPM: 135.6
1943 Male, age 61, both hemispheres 197.8
2851 Male, age 80, both hemispheres 125.1
2138 Female, age 91, both hemispheres 116.6
1962 Male, age 76, both hemispheres 102.7
Medial parabrachial nucleus
nTPM: 124.7
2463 Female, age 85, right hemisphere 155.1
2786 Male, age 76, both hemispheres 152.0
2170 Female, age 91, both hemispheres 117.8
2854 Male, age 80, both hemispheres 109.0
2156 Male, age 61, both hemispheres 89.7
Medial periolivary nuclei
nTPM: 111.9
2081 Male, age 80, both hemispheres 130.2
2458 Female, age 91, both hemispheres 123.6
2063 Male, age 76, both hemispheres 113.1
2791 Male, age 74, right hemisphere 106.7
2171 Female, age 85, both hemispheres 85.8
Medial vestibular nucleus
nTPM: 131.6
2624 Male, age 61, both hemispheres 184.4
2093 Male, age 80, both hemispheres 170.3
2803 Female, age 91, both hemispheres 141.1
2801 Male, age 74, both hemispheres 111.2
2743 Female, age 85, both hemispheres 91.8
2134 Male, age 76, both hemispheres 90.7
Motor facial nucleus
nTPM: 129.3
2795 Female, age 91, both hemispheres 156.5
2062 Male, age 76, both hemispheres 138.1
2327 Male, age 80, both hemispheres 124.1
2126 Male, age 61, both hemispheres 122.2
2365 Male, age 74, right hemisphere 118.1
2697 Female, age 85, both hemispheres 116.9
Motor hypoglossal nucleus
nTPM: 122.9
2125 Female, age 91, both hemispheres 161.5
2132 Female, age 85, both hemispheres 135.9
2182 Male, age 80, both hemispheres 132.0
2461 Male, age 61, both hemispheres 107.9
2277 Male, age 76, both hemispheres 77.4
Motor trigeminal nucleus
nTPM: 149.9
2560 Male, age 74, both hemispheres 189.3
2321 Female, age 91, both hemispheres 159.9
2309 Male, age 76, both hemispheres 155.0
2335 Male, age 61, both hemispheres 129.9
2079 Male, age 80, both hemispheres 115.4
Nuclei of the trapezoid body
nTPM: 120.0
1983 Male, age 76, both hemispheres 146.3
2368 Female, age 91, both hemispheres 145.8
2166 Male, age 80, both hemispheres 133.0
2159 Male, age 61, both hemispheres 101.4
2735 Female, age 85, both hemispheres 73.6
Nucleus ambiguus
nTPM: 119.4
2071 Male, age 76, both hemispheres 139.6
2096 Female, age 85, both hemispheres 99.3
Nucleus cuneatus
nTPM: 168.0
2562 Male, age 61, both hemispheres 252.6
2376 Male, age 61, both hemispheres 190.4
2564 Male, age 74, both hemispheres 183.2
2100 Male, age 76, both hemispheres 178.9
2131 Male, age 76, both hemispheres 158.8
2380 Male, age 80, both hemispheres 147.0
2381 Male, age 80, both hemispheres 146.2
2805 Female, age 91, both hemispheres 140.7
2808 Female, age 85, both hemispheres 114.3
Nucleus gracilis
nTPM: 158.7
2382 Male, age 80, both hemispheres 176.3
2299 Female, age 85, both hemispheres 156.5
2627 Male, age 74, both hemispheres 143.3
Nucleus raphe magnus
nTPM: 122.8
2328 Male, age 80, both hemispheres 183.4
2459 Female, age 91, both hemispheres 154.3
2051 Male, age 76, both hemispheres 133.5
2455 Male, age 74, both hemispheres 125.5
2160 Male, age 61, both hemispheres 79.0
2172 Female, age 85, both hemispheres 61.1
Nucleus raphe obscurus
nTPM: 108.2
2845 Female, age 85, midline 111.6
2800 Male, age 61, midline 110.4
2142 Male, age 76, midline 102.6
Nucleus raphe pallidus
nTPM: 103.1
2183 Male, age 80, midline 113.3
1924 Male, age 61, midline 104.3
2145 Male, age 76, midline 91.9
Nucleus tractus solitarii
nTPM: 77.8
2656 Male, age 76, both hemispheres 93.4
2144 Female, age 91, right hemisphere 80.5
2307 Male, age 80, both hemispheres 70.5
2191 Female, age 85, both hemispheres 66.8
Paramedian reticular nucleus
nTPM: 123.4
2313 Male, age 61, both hemispheres 165.5
2050 Female, age 85, both hemispheres 118.3
2057 Male, age 80, both hemispheres 118.3
2052 Male, age 76, both hemispheres 91.3
Parvicellular reticular nuclei
nTPM: 122.6
2558 Male, age 74, both hemispheres 143.7
2119 Male, age 80, both hemispheres 112.3
2095 Male, age 76, both hemispheres 111.9
Parvicellular reticular nuclei, medullary
nTPM: 137.5
2091 Female, age 85, both hemispheres 142.3
2181 Male, age 80, left hemisphere 139.3
2189 Female, age 91, both hemispheres 130.9
Pedunculopontine tegmental nucleus
nTPM: 119.8
1921 Female, age 85, both hemispheres 142.5
2334 Male, age 80, both hemispheres 140.1
2338 Male, age 61, both hemispheres 76.8
Peritrigeminal nucleus
nTPM: 113.5
2067 Female, age 85, both hemispheres 119.6
2179 Male, age 61, both hemispheres 110.9
2136 Male, age 76, both hemispheres 109.9
Pontine nuclei
nTPM: 150.5
2454 Male, age 74, left hemisphere 203.0
1968 Male, age 76, left hemisphere 193.6
2115 Male, age 80, left hemisphere 169.4
2109 Female, age 72, unknown 164.5
2319 Female, age 91, both hemispheres 143.0
1863 Male, age 55, unknown 132.6
2787 Female, age 85, both hemispheres 110.2
2727 Male, age 61, right hemisphere 87.5
Pontine raphe nucleus
nTPM: 116.0
2853 Male, age 76, midline 126.8
2122 Female, age 85, midline 105.3
Posteroventral cochlear nucleus
nTPM: 152.5
2371 Male, age 61, both hemispheres 229.5
2341 Male, age 80, both hemispheres 167.7
2135 Female, age 91, both hemispheres 133.0
2070 Male, age 76, both hemispheres 117.7
2752 Female, age 85, both hemispheres 114.5
Prepositus hypoglossal nucleus
nTPM: 103.3
2086 Male, age 80, both hemispheres 117.7
2855 Female, age 85, right hemisphere 89.0
Principal sensory trigeminal nucleus
nTPM: 118.0
2367 Female, age 91, left hemisphere 137.0
2324 Male, age 76, both hemispheres 136.8
2008 Male, age 80, left hemisphere 115.1
2158 Male, age 61, both hemispheres 83.0
Reticular pontine nucleus, caudal
nTPM: 155.6
2457 Female, age 91, both hemispheres 170.2
2092 Male, age 76, both hemispheres 168.9
2559 Male, age 74, both hemispheres 144.8
2332 Male, age 80, right hemisphere 138.3
Reticular pontine nucleus, oral
nTPM: 150.9
2366 Female, age 91, both hemispheres 172.1
1939 Male, age 80, both hemispheres 170.8
2167 Male, age 76, both hemispheres 141.3
2012 Female, age 85, both hemispheres 138.4
2361 Male, age 74, both hemispheres 131.8
Reticulotegmental nucleus
nTPM: 149.5
2333 Male, age 80, both hemispheres 173.7
2452 Male, age 74, both hemispheres 171.9
2322 Female, age 91, both hemispheres 142.1
2325 Male, age 76, both hemispheres 110.5
Spinal trigeminal nucleus, caudal
nTPM: 137.0
2312 Male, age 61, both hemispheres 164.8
2308 Male, age 80, both hemispheres 147.9
2447 Male, age 76, both hemispheres 146.9
2390 Female, age 91, both hemispheres 129.2
2642 Male, age 74, both hemispheres 96.3
Spinal trigeminal nucleus, interpolar
nTPM: 128.0
2625 Male, age 61, both hemispheres 197.3
2389 Female, age 91, both hemispheres 140.1
2033 Male, age 80, both hemispheres 131.7
2386 Female, age 85, both hemispheres 109.0
2066 Male, age 76, right hemisphere 61.7
Spinal trigeminal nucleus, oral
nTPM: 137.0
1978 Male, age 76, both hemispheres 147.7
2164 Male, age 80, both hemispheres 132.3
2737 Female, age 85, both hemispheres 130.8
Spinal vestibular nucleus
nTPM: 149.9
2796 Male, age 61, both hemispheres 175.4
2748 Male, age 76, both hemispheres 164.8
2780 Male, age 80, both hemispheres 155.4
2186 Female, age 91, both hemispheres 153.1
2384 Male, age 74, both hemispheres 134.0
2806 Female, age 85, both hemispheres 116.7
Subcoeruleus area
nTPM: 137.0
2369 Female, age 85, left hemisphere 173.1
2451 Male, age 74, both hemispheres 142.0
1958 Male, age 80, both hemispheres 132.1
2323 Female, age 91, left hemisphere 123.2
2089 Male, age 76, left hemisphere 114.6
Superior olive
nTPM: 144.9
2329 Male, age 80, right hemisphere 180.6
2020 Male, age 76, both hemispheres 175.3
2561 Female, age 91, both hemispheres 144.3
1875 Female, age 85, both hemispheres 117.1
2364 Male, age 74, right hemisphere 107.1
Superior vestibular nucleus
nTPM: 118.1
2061 Male, age 76, both hemispheres 139.0
2015 Male, age 80, both hemispheres 127.4
2383 Male, age 74, both hemispheres 87.9
Ventral medullary reticular nucleus
nTPM: 137.5
2372 Male, age 61, both hemispheres 148.4
2060 Male, age 76, both hemispheres 126.5
Ventral periolivary nuclei
nTPM: 109.2
2023 Male, age 76, both hemispheres 165.4
2165 Male, age 80, both hemispheres 114.1
2794 Female, age 91, left hemisphere 88.6
2130 Female, age 85, both hemispheres 68.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 117.9
2118 Male, age 80, both hemispheres 144.1
2180 Male, age 61, both hemispheres 129.2
2302 Female, age 91, both hemispheres 115.1
1986 Male, age 76, both hemispheres 102.2
2741 Female, age 85, both hemispheres 98.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 136.0
2456 Female, age 91, both hemispheres 168.3
2161 Male, age 80, both hemispheres 149.0
1959 Male, age 76, both hemispheres 145.7
2449 Male, age 74, both hemispheres 129.6
2840 Female, age 85, both hemispheres 113.9
2359 Male, age 61, both hemispheres 109.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 143.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 143.3
FF:10182-103D2 60 years, female 150.7
FF:10165-103B3 76 years, female 135.9
Medulla oblongata
Scaled Tags Per Million: 124.4
FF:10174-103C3 60 years, female 144.4
FF:10038-101F2 18-64 years, mixed 116.2
FF:10155-103A2 76 years, female 112.5
Pons
Scaled Tags Per Million: 112.0
FF:10033-101E6 18-54 years, mixed 112.0

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 38.7
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 38.7
Samples: 4

Max nTPM: 42.5
Min nTPM: 37.0
Sample A Female 37.1
Sample B Female 42.5
Sample C Male 38.0
Sample D Male 37.0
Pons
nTPM: 36.5
Samples: 4

Max nTPM: 42.1
Min nTPM: 27.6
Sample A Female 40.9
Sample B Female 27.6
Sample C Male 35.5
Sample D Male 42.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 26.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 26.9
Samples: 4

Max nTPM: 30.5
Min nTPM: 22.5
Sample A Male 22.5
Sample B Male 25.5
Sample C Female 29.0
Sample D Female 30.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.1
69114097 Antisense, RP_050317_01_B07, Mouse strain C57BL/6J (56 days, male) 0.1
Pons
Expression energy: 0.1
69114097 Antisense, RP_050317_01_B07, Mouse strain C57BL/6J (56 days, male) 0.1

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