We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
NECAB2
HPA
RESOURCES
  • TISSUE
  • BRAIN
  • SINGLE CELL
  • SUBCELLULAR
  • CANCER
  • BLOOD
  • CELL LINE
  • STRUCTURE & INTERACTION
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Antibody panel
Tissue
Main location
Patient ID
Annotation
Tissue
Category
Tau score
Cluster
Reliability
Brain region
Category
Tau score
Brain region
Category
Tau score
Brain region
Category
Tau score
Cluster
Reliability
Tissue
Cell type
Enrichment
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell type
Category
Tau score
Cell lineage
Category
Tau score
Cluster
Cluster
Location
Searches
Location
Cell line
Class
Type
Phase
Reliability
Cancer
Prognosis
Cancer
Category
Cancer
Category
Tau score
Cluster
Variants
Interacting gene (ensg_id)
Type
Number of interactions
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Data type
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • SUBCELL

  • CANCER

  • BLOOD

  • CELL LINE

  • STRUCT & INT

  • NECAB2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:140.5 nTPM
FANTOM5:117.3 Scaled Tags Per Million

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA013998Antibody HPA014144Antibody CAB068211
Glial cells Not detectedNot detectedMedium
Neuronal cells HighHighHigh







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

140.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 140.5
Samples: 246

Max nTPM: 334.5
Min nTPM: 20.7
Std nTPM: 58.0
Median nTPM: 137.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 334.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 330.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 299.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 273.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 272.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 269.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 265.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 264.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 260.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 254.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 248.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 247.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 243.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 231.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 229.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 229.3
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 226.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 224.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 223.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 222.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 222.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 221.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 221.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 221.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 215.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 211.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 209.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 209.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 209.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 208.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 206.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 206.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 205.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 203.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 202.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 202.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 201.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 201.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 199.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 197.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 195.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 193.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 193.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 190.9
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 190.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 188.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 188.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 188.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 186.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 186.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 186.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 185.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 184.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 184.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 183.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 180.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 179.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 178.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 177.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 177.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 175.8
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 174.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 174.1
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 173.8
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 173.1
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 172.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 171.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 170.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 170.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 169.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 169.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 169.1
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 168.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 168.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 168.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 166.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 166.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 166.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 166.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 165.3
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 164.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 163.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 162.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 161.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 161.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 161.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 160.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 160.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 159.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 159.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 159.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 158.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 158.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 155.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 155.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 154.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 154.9
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 154.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 154.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 154.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 153.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 152.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 152.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 151.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 151.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 150.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 149.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 148.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 147.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 146.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 145.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 143.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 143.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 143.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 142.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 142.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 141.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 141.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 140.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 140.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 138.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 138.1
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 136.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 135.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 134.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 134.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 133.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 133.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 133.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 132.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 131.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 131.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 130.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 129.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 129.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 128.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 128.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 127.9
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 127.9
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 126.6
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 126.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 126.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 126.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 126.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 125.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 122.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 121.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 121.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 121.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 121.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 120.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 120.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 119.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 119.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 118.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 118.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 117.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 116.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 114.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 114.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 114.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 114.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 111.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 111.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 111.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 109.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 108.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 108.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 107.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 106.8
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 105.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 105.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 105.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 103.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 102.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 101.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 101.2
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 100.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 100.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 97.7
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.6
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 97.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 97.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 96.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 96.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 95.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 95.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 95.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 94.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 94.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 94.7
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 93.8
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 90.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 89.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 89.3
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 88.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 87.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 86.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 85.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 83.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 83.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 83.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 82.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 81.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 80.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 78.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 78.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 77.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 77.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 76.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 75.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 73.4
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 72.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 70.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 70.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 69.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 69.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 68.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 66.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 65.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 64.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 63.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 60.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 60.0
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 57.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 55.7
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 54.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 54.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 53.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 51.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 50.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 46.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 43.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 41.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 39.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 36.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 35.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 32.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 27.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 27.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 20.7
Show allShow less

CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

117.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 117.3
FF:10164-103B2 76 years, female 117.3

Contact

  • NEWS ARTICLES
  • PRESS ROOM

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org