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RABAC1
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  • RABAC1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:184.1 nTPM
FANTOM5:71.4 Scaled Tags Per Million
Pig:122.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA029171Antibody CAB019320
Glial cells LowLow
Neuronal cells LowMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

184.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 184.1
Samples: 246

Max nTPM: 366.1
Min nTPM: 80.8
Std nTPM: 41.1
Median nTPM: 179.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 366.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 313.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 310.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 310.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 302.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 295.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 285.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 285.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 275.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 275.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 269.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 267.3
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 263.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 256.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 254.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 250.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 248.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 245.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 245.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 244.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 243.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 241.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 238.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 236.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 233.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 231.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 231.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 230.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 226.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 225.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 224.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 223.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 223.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 222.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 221.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 221.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 220.7
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 219.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 219.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 218.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 218.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 218.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 217.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 216.7
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 216.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 216.5
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 215.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 215.0
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 213.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 213.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 212.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 211.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 211.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 210.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 208.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 208.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 208.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 206.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 206.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 205.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 205.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 204.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 203.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 201.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 200.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 200.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 200.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 199.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 198.8
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 198.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 198.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 197.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 196.7
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 196.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 196.5
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 195.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 195.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 194.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 194.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 194.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 192.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 191.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 191.5
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 191.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 191.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 190.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 189.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 189.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 189.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 189.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 188.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 188.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 187.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 187.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 187.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 187.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 186.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 186.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 186.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 186.3
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 185.7
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 185.0
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 184.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 184.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 183.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 183.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 183.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 183.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 182.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 182.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 182.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 182.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 181.8
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 181.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 181.4
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 181.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 180.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 180.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 180.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 179.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 179.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 179.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 179.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 178.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 178.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 178.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 178.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 178.1
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 177.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 176.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 176.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 176.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 175.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 174.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 174.7
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 174.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 174.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 173.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 173.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 173.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 173.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 173.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 173.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 173.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 172.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 171.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 171.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 171.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 171.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 170.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 170.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 170.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 170.4
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 170.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 170.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 169.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 169.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 169.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 168.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 168.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 168.5
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 168.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 168.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 168.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 166.1
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 165.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 164.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 164.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 163.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 163.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 162.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 162.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 162.6
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 162.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 162.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 161.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 161.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 161.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 161.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 160.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 160.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 160.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 160.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 160.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 159.8
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 159.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 159.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 158.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 158.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 157.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 156.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 156.4
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 156.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 155.9
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 155.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 155.2
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 155.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 154.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 154.0
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 154.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 153.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 152.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 151.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 151.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 151.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 150.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 149.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 148.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 148.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 148.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 148.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 148.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 147.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 147.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 146.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 145.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 145.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 144.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 144.0
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 143.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 143.0
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 142.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 141.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 140.9
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 140.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 138.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 138.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 134.7
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 133.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 132.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 131.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 130.6
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 127.0
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 121.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 120.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 117.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 116.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 115.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 110.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 110.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 109.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 107.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 100.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 98.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 90.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 80.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

71.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 71.4
FF:10164-103B2 76 years, female 71.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.9
Pig sample Sample description nTPM
Caudate
nTPM: 122.9
Samples: 4

Max nTPM: 142.5
Min nTPM: 101.7
Sample A Female 101.7
Sample B Female 142.5
Sample C Male 134.0
Sample D Male 113.2

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