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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:476.2 nTPM
FANTOM5:231.6 Scaled Tags Per Million
Pig:449.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA045177Antibody CAB025346
Glial cells LowMedium
Neuronal cells MediumMedium




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

476.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 476.2
Samples: 246

Max nTPM: 849.3
Min nTPM: 205.4
Std nTPM: 108.2
Median nTPM: 472.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 849.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 794.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 792.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 771.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 763.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 753.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 743.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 719.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 713.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 704.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 683.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 671.1
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 667.3
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 650.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 648.0
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 643.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 640.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 640.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 629.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 619.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 618.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 612.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 609.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 604.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 597.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 593.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 591.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 591.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 586.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 582.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 580.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 578.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 574.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 573.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 573.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 573.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 573.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 572.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 570.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 569.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 567.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 567.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 566.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 565.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 562.3
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 561.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 561.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 559.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 556.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 555.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 554.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 554.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 552.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 550.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 549.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 547.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 546.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 545.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 545.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 544.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 543.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 543.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 541.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 540.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 540.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 538.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 529.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 528.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 528.8
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 528.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 528.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 527.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 526.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 524.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 523.4
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 523.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 518.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 518.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 518.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 517.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 517.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 516.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 514.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 512.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 510.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 509.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 509.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 508.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 508.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 507.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 505.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 502.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 501.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 500.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 500.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 500.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 499.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 498.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 498.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 498.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 497.8
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 497.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 494.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 493.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 492.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 492.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 491.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 491.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 489.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 489.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 489.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 488.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 487.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 487.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 486.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 486.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 486.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 486.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 485.2
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 477.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 476.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 475.0
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 472.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 471.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 471.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 471.0
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 468.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 465.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 464.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 463.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 463.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 463.2
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 461.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 459.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 459.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 459.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 459.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 457.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 456.3
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 454.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 453.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 453.6
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 453.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 452.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 452.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 451.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 451.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 450.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 449.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 447.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 445.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 445.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 439.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 438.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 438.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 437.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 436.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 436.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 431.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 429.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 428.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 428.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 426.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 426.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 425.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 423.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 423.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 423.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 423.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 422.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 422.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 420.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 419.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 418.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 417.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 417.8
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 416.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 415.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 415.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 414.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 412.0
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 410.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 409.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 407.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 405.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 400.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 400.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 400.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 400.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 398.5
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 397.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 396.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 394.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 394.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 392.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 390.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 389.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 387.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 384.9
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 383.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 383.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 383.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 382.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 381.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 381.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 381.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 377.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 374.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 374.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 373.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 367.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 364.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 362.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 361.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 353.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 348.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 348.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 347.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 347.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 343.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 342.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 342.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 341.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 339.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 337.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 336.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 329.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 325.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 319.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 319.6
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 319.4
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 317.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 313.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 311.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 310.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 307.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 305.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 274.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 273.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 273.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 272.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 260.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 248.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 238.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 226.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 205.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

231.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 231.6
FF:10164-103B2 76 years, female 231.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

449.0
Pig sample Sample description nTPM
Caudate
nTPM: 449.1
Samples: 4

Max nTPM: 542.2
Min nTPM: 362.8
Sample A Female 362.8
Sample B Female 501.4
Sample C Male 542.2
Sample D Male 389.8

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