PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:43.4 nTPM
FANTOM5:64.1 Scaled Tags Per Million
Pig:43.0 nTPM
Mouse:64.6 nTPM
Allen mouse:1.9 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 43.4
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 35.6
2188 Female, age 91, both hemispheres 43.9
2301 Female, age 85, both hemispheres 37.0
2090 Male, age 80, both hemispheres 33.9
1984 Male, age 76, both hemispheres 27.7
Area postrema
nTPM: 29.8
2306 Male, age 80, both hemispheres 33.3
2054 Male, age 76, both hemispheres 30.8
2799 Male, age 61, both hemispheres 25.2
Dorsal cochlear nucleus
nTPM: 37.1
2802 Male, age 74, right hemisphere 46.0
2187 Female, age 91, both hemispheres 38.5
2378 Male, age 80, both hemispheres 35.0
2370 Male, age 61, both hemispheres 33.2
2058 Male, age 76, both hemispheres 32.7
Dorsal medullary reticular nucleus
nTPM: 38.3
2040 Female, age 85, both hemispheres 41.2
2088 Male, age 76, both hemispheres 39.5
2373 Male, age 61, both hemispheres 34.0
Dorsal motor vagal complex
nTPM: 34.7
2000 Male, age 74, unknown 41.7
2133 Female, age 91, both hemispheres 38.8
2643 Male, age 74, both hemispheres 35.8
2185 Male, age 76, both hemispheres 33.5
2844 Male, age 55, unknown 32.5
2813 Female, age 72, unknown 31.8
2797 Male, age 61, both hemispheres 31.7
2807 Female, age 85, both hemispheres 31.5
Dorsal tegmental nucleus
nTPM: 34.1
2326 Male, age 74, both hemispheres 44.8
2083 Male, age 80, both hemispheres 37.7
1936 Male, age 76, left hemisphere 30.5
2358 Male, age 61, both hemispheres 23.5
Dorsolateral tegmental area
nTPM: 35.9
2751 Female, age 85, both hemispheres 50.7
2654 Male, age 80, both hemispheres 38.3
2360 Male, age 74, both hemispheres 33.2
2141 Male, age 76, both hemispheres 30.6
2337 Male, age 61, both hemispheres 26.9
Gigantocellular reticular nuclei, medullary
nTPM: 41.5
2387 Female, age 91, both hemispheres 46.7
1876 Female, age 85, both hemispheres 45.2
2022 Male, age 76, right hemisphere 42.3
2310 Male, age 80, both hemispheres 41.1
2462 Male, age 74, both hemispheres 39.6
2314 Male, age 61, both hemispheres 33.9
Gigantocellular reticular nuclei, pars
nTPM: 35.1
2084 Female, age 85, both hemispheres 36.7
2336 Male, age 61, both hemispheres 36.1
2706 Male, age 80, both hemispheres 35.1
2330 Male, age 80, both hemispheres 34.0
2168 Male, age 76, both hemispheres 33.5
Inferior olive
nTPM: 32.2
2563 Male, age 74, both hemispheres 37.1
2178 Male, age 61, both hemispheres 34.0
2085 Female, age 85, both hemispheres 32.6
2379 Male, age 80, both hemispheres 28.8
2628 Female, age 91, both hemispheres 28.4
Kolliker-Fuse nucleus
nTPM: 34.1
2793 Female, age 91, left hemisphere 44.0
2163 Male, age 80, both hemispheres 34.8
2315 Male, age 76, right hemisphere 23.7
Lateral lemniscal nuclei
nTPM: 40.7
2320 Female, age 91, left hemisphere 46.5
2453 Male, age 74, right hemisphere 45.7
2036 Male, age 80, both hemispheres 40.4
2169 Male, age 76, both hemispheres 35.7
2746 Female, age 85, left hemisphere 35.3
Lateral medullary reticular nucleus
nTPM: 36.0
2305 Male, age 74, both hemispheres 46.1
2190 Female, age 85, both hemispheres 36.3
2852 Male, age 80, both hemispheres 35.4
2804 Female, age 91, both hemispheres 34.7
2044 Male, age 76, both hemispheres 33.1
2374 Male, age 61, both hemispheres 30.4
Lateral parabrachial nucleus
nTPM: 37.5
2792 Male, age 76, both hemispheres 42.0
2790 Male, age 61, both hemispheres 41.3
2013 Male, age 80, both hemispheres 38.1
2139 Female, age 85, right hemisphere 28.7
Lateral vestibular nucleus
nTPM: 33.7
2184 Male, age 76, both hemispheres 34.5
2311 Male, age 80, both hemispheres 32.9
Locus coeruleus
nTPM: 37.2
2014 Male, age 55, unknown 44.0
2788 Male, age 74, unknown 43.0
2720 Male, age 74, both hemispheres 41.9
2317 Female, age 72, unknown 39.0
2162 Male, age 80, both hemispheres 34.1
2123 Female, age 91, both hemispheres 29.8
1980 Male, age 76, both hemispheres 28.9
Medial olivary nucleus
nTPM: 35.1
1962 Male, age 76, both hemispheres 37.5
1943 Male, age 61, both hemispheres 37.1
2138 Female, age 91, both hemispheres 33.5
2851 Male, age 80, both hemispheres 32.2
Medial parabrachial nucleus
nTPM: 38.6
2463 Female, age 85, right hemisphere 42.8
2170 Female, age 91, both hemispheres 40.4
2854 Male, age 80, both hemispheres 37.3
2156 Male, age 61, both hemispheres 36.6
2786 Male, age 76, both hemispheres 36.0
Medial periolivary nuclei
nTPM: 38.5
2791 Male, age 74, right hemisphere 46.8
2458 Female, age 91, both hemispheres 40.2
2081 Male, age 80, both hemispheres 40.0
2063 Male, age 76, both hemispheres 34.8
2171 Female, age 85, both hemispheres 30.9
Medial vestibular nucleus
nTPM: 35.5
2801 Male, age 74, both hemispheres 43.5
2803 Female, age 91, both hemispheres 42.2
2093 Male, age 80, both hemispheres 37.3
2743 Female, age 85, both hemispheres 30.6
2134 Male, age 76, both hemispheres 29.7
2624 Male, age 61, both hemispheres 29.3
Motor facial nucleus
nTPM: 38.5
2365 Male, age 74, right hemisphere 45.9
2697 Female, age 85, both hemispheres 39.9
2126 Male, age 61, both hemispheres 37.1
2327 Male, age 80, both hemispheres 36.8
2795 Female, age 91, both hemispheres 36.0
2062 Male, age 76, both hemispheres 35.0
Motor hypoglossal nucleus
nTPM: 35.7
2132 Female, age 85, both hemispheres 44.4
2125 Female, age 91, both hemispheres 41.3
2182 Male, age 80, both hemispheres 31.6
2461 Male, age 61, both hemispheres 31.3
2277 Male, age 76, both hemispheres 29.9
Motor trigeminal nucleus
nTPM: 38.6
2560 Male, age 74, both hemispheres 46.7
2321 Female, age 91, both hemispheres 40.7
2309 Male, age 76, both hemispheres 37.2
2079 Male, age 80, both hemispheres 36.1
2335 Male, age 61, both hemispheres 32.4
Nuclei of the trapezoid body
nTPM: 36.1
2368 Female, age 91, both hemispheres 41.4
2166 Male, age 80, both hemispheres 39.7
1983 Male, age 76, both hemispheres 35.2
2159 Male, age 61, both hemispheres 33.6
2735 Female, age 85, both hemispheres 30.9
Nucleus ambiguus
nTPM: 33.1
2071 Male, age 76, both hemispheres 36.0
2096 Female, age 85, both hemispheres 30.2
Nucleus cuneatus
nTPM: 35.0
2381 Male, age 80, both hemispheres 40.0
2380 Male, age 80, both hemispheres 37.6
2805 Female, age 91, both hemispheres 37.2
2808 Female, age 85, both hemispheres 36.9
2376 Male, age 61, both hemispheres 35.1
2564 Male, age 74, both hemispheres 35.0
2100 Male, age 76, both hemispheres 33.8
2562 Male, age 61, both hemispheres 31.3
2131 Male, age 76, both hemispheres 28.4
Nucleus gracilis
nTPM: 37.6
2382 Male, age 80, both hemispheres 41.5
2627 Male, age 74, both hemispheres 37.0
2299 Female, age 85, both hemispheres 34.3
Nucleus raphe magnus
nTPM: 38.7
2455 Male, age 74, both hemispheres 46.5
2459 Female, age 91, both hemispheres 45.7
2328 Male, age 80, both hemispheres 41.8
2051 Male, age 76, both hemispheres 35.0
2160 Male, age 61, both hemispheres 32.8
2172 Female, age 85, both hemispheres 30.7
Nucleus raphe obscurus
nTPM: 39.0
2845 Female, age 85, midline 42.3
2800 Male, age 61, midline 38.3
2142 Male, age 76, midline 36.3
Nucleus raphe pallidus
nTPM: 33.9
2145 Male, age 76, midline 37.7
1924 Male, age 61, midline 32.4
2183 Male, age 80, midline 31.4
Nucleus tractus solitarii
nTPM: 29.5
2144 Female, age 91, right hemisphere 34.2
2656 Male, age 76, both hemispheres 33.1
2307 Male, age 80, both hemispheres 27.1
2191 Female, age 85, both hemispheres 23.6
Paramedian reticular nucleus
nTPM: 38.1
2050 Female, age 85, both hemispheres 39.7
2052 Male, age 76, both hemispheres 39.6
2313 Male, age 61, both hemispheres 37.7
2057 Male, age 80, both hemispheres 35.5
Parvicellular reticular nuclei
nTPM: 39.9
2558 Male, age 74, both hemispheres 46.5
2095 Male, age 76, both hemispheres 36.6
2119 Male, age 80, both hemispheres 36.6
Parvicellular reticular nuclei, medullary
nTPM: 37.2
2181 Male, age 80, left hemisphere 38.9
2189 Female, age 91, both hemispheres 38.5
2091 Female, age 85, both hemispheres 34.2
Pedunculopontine tegmental nucleus
nTPM: 34.3
2334 Male, age 80, both hemispheres 37.2
1921 Female, age 85, both hemispheres 37.0
2338 Male, age 61, both hemispheres 28.9
Peritrigeminal nucleus
nTPM: 31.5
2179 Male, age 61, both hemispheres 33.2
2136 Male, age 76, both hemispheres 32.2
2067 Female, age 85, both hemispheres 29.2
Pontine nuclei
nTPM: 43.4
2454 Male, age 74, left hemisphere 62.4
2319 Female, age 91, both hemispheres 48.5
2109 Female, age 72, unknown 47.3
1863 Male, age 55, unknown 44.5
1968 Male, age 76, left hemisphere 39.6
2727 Male, age 61, right hemisphere 36.5
2115 Male, age 80, left hemisphere 35.5
2787 Female, age 85, both hemispheres 33.0
Pontine raphe nucleus
nTPM: 37.6
2122 Female, age 85, midline 41.6
2853 Male, age 76, midline 33.6
Posteroventral cochlear nucleus
nTPM: 40.7
2341 Male, age 80, both hemispheres 46.5
2135 Female, age 91, both hemispheres 44.9
2752 Female, age 85, both hemispheres 39.1
2371 Male, age 61, both hemispheres 37.0
2070 Male, age 76, both hemispheres 35.9
Prepositus hypoglossal nucleus
nTPM: 33.1
2855 Female, age 85, right hemisphere 36.8
2086 Male, age 80, both hemispheres 29.5
Principal sensory trigeminal nucleus
nTPM: 37.6
2367 Female, age 91, left hemisphere 44.6
2008 Male, age 80, left hemisphere 41.7
2324 Male, age 76, both hemispheres 32.5
2158 Male, age 61, both hemispheres 31.6
Reticular pontine nucleus, caudal
nTPM: 43.1
2559 Male, age 74, both hemispheres 53.3
2457 Female, age 91, both hemispheres 47.0
2332 Male, age 80, right hemisphere 36.4
2092 Male, age 76, both hemispheres 35.7
Reticular pontine nucleus, oral
nTPM: 42.7
2361 Male, age 74, both hemispheres 47.9
2366 Female, age 91, both hemispheres 47.1
2012 Female, age 85, both hemispheres 42.2
1939 Male, age 80, both hemispheres 38.4
2167 Male, age 76, both hemispheres 38.1
Reticulotegmental nucleus
nTPM: 39.0
2452 Male, age 74, both hemispheres 47.0
2322 Female, age 91, both hemispheres 42.7
2333 Male, age 80, both hemispheres 34.3
2325 Male, age 76, both hemispheres 32.2
Spinal trigeminal nucleus, caudal
nTPM: 38.1
2390 Female, age 91, both hemispheres 41.4
2642 Male, age 74, both hemispheres 40.3
2312 Male, age 61, both hemispheres 37.7
2308 Male, age 80, both hemispheres 36.3
2447 Male, age 76, both hemispheres 34.8
Spinal trigeminal nucleus, interpolar
nTPM: 36.5
2389 Female, age 91, both hemispheres 41.8
2386 Female, age 85, both hemispheres 40.1
2033 Male, age 80, both hemispheres 37.6
2625 Male, age 61, both hemispheres 32.4
2066 Male, age 76, right hemisphere 30.7
Spinal trigeminal nucleus, oral
nTPM: 37.3
1978 Male, age 76, both hemispheres 42.4
2164 Male, age 80, both hemispheres 35.4
2737 Female, age 85, both hemispheres 34.1
Spinal vestibular nucleus
nTPM: 41.7
2384 Male, age 74, both hemispheres 52.6
2186 Female, age 91, both hemispheres 43.3
2806 Female, age 85, both hemispheres 41.3
2748 Male, age 76, both hemispheres 40.3
2780 Male, age 80, both hemispheres 38.3
2796 Male, age 61, both hemispheres 34.2
Subcoeruleus area
nTPM: 42.1
2369 Female, age 85, left hemisphere 56.2
2451 Male, age 74, both hemispheres 42.7
1958 Male, age 80, both hemispheres 39.5
2323 Female, age 91, left hemisphere 38.3
2089 Male, age 76, left hemisphere 34.0
Superior olive
nTPM: 41.1
2364 Male, age 74, right hemisphere 46.2
2020 Male, age 76, both hemispheres 41.7
1875 Female, age 85, both hemispheres 41.4
2329 Male, age 80, right hemisphere 38.7
2561 Female, age 91, both hemispheres 37.6
Superior vestibular nucleus
nTPM: 31.2
2015 Male, age 80, both hemispheres 34.4
2383 Male, age 74, both hemispheres 31.5
2061 Male, age 76, both hemispheres 27.7
Ventral medullary reticular nucleus
nTPM: 36.8
2060 Male, age 76, both hemispheres 38.1
2372 Male, age 61, both hemispheres 35.4
Ventral periolivary nuclei
nTPM: 37.2
2023 Male, age 76, both hemispheres 45.4
2794 Female, age 91, left hemisphere 39.1
2165 Male, age 80, both hemispheres 36.0
2130 Female, age 85, both hemispheres 28.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 32.8
2118 Male, age 80, both hemispheres 36.2
2302 Female, age 91, both hemispheres 32.9
2741 Female, age 85, both hemispheres 32.0
2180 Male, age 61, both hemispheres 31.7
1986 Male, age 76, both hemispheres 31.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 40.5
2449 Male, age 74, both hemispheres 47.7
2456 Female, age 91, both hemispheres 45.3
2840 Female, age 85, both hemispheres 37.8
2359 Male, age 61, both hemispheres 37.6
1959 Male, age 76, both hemispheres 37.3
2161 Male, age 80, both hemispheres 37.2

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 64.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 40.4
FF:10182-103D2 60 years, female 40.6
FF:10165-103B3 76 years, female 40.2
Medulla oblongata
Scaled Tags Per Million: 39.7
FF:10038-101F2 18-64 years, mixed 49.1
FF:10174-103C3 60 years, female 42.3
FF:10155-103A2 76 years, female 27.8
Pons
Scaled Tags Per Million: 64.1
FF:10033-101E6 18-54 years, mixed 64.1

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 43.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 43.0
Samples: 4

Max nTPM: 46.7
Min nTPM: 38.1
Sample A Female 46.7
Sample B Female 43.0
Sample C Male 44.1
Sample D Male 38.1
Pons
nTPM: 36.7
Samples: 4

Max nTPM: 45.1
Min nTPM: 31.0
Sample A Female 31.0
Sample B Female 33.8
Sample C Male 36.8
Sample D Male 45.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 64.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 64.7
Samples: 4

Max nTPM: 68.9
Min nTPM: 61.0
Sample A Male 61.0
Sample B Male 62.9
Sample C Female 65.8
Sample D Female 68.9

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.9
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.9
583860 Antisense, RP_040831_01_B11, Mouse strain C57BL/6J (56 days, male) 1.9
Pons
Expression energy: 1.7
583860 Antisense, RP_040831_01_B11, Mouse strain C57BL/6J (56 days, male) 1.7

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