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SPOCK2
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:110.5 nTPM
FANTOM5:371.3 Scaled Tags Per Million
Pig:304.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA044605
Glial cells Low
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

110.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 110.5
Samples: 246

Max nTPM: 163.1
Min nTPM: 46.7
Std nTPM: 24.9
Median nTPM: 112.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 163.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 162.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 160.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 156.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 156.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 155.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 153.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 153.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 153.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 152.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 151.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 150.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 149.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 149.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 149.1
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 148.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 148.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 147.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 145.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 145.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 144.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 144.3
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 143.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 143.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 141.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 141.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 140.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 140.5
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 140.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 140.0
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 139.6
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 139.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 139.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 139.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 138.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 137.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 137.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 136.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 136.2
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 136.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 135.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 135.9
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 133.7
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 133.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 133.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 133.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 133.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 132.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 132.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 132.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 131.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 131.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 130.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 130.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 129.9
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 129.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 129.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 129.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 129.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 129.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 129.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 129.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 128.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 127.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 127.5
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 126.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 126.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 126.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 126.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 126.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 126.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 125.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 125.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 125.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 125.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 124.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 124.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 124.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 123.6
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 123.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 122.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 122.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 122.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 121.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 121.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 121.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 120.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 120.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 119.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 119.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 119.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 119.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 119.2
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 119.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 119.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 118.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 118.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 118.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 118.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 117.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 117.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 117.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 117.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 117.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 116.2
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 116.2
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 115.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 115.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 114.7
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 114.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 114.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 113.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 113.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 113.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 112.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 112.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 112.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 112.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 112.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 112.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 111.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 111.5
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 111.1
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 110.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 110.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 110.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 110.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 110.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 110.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 109.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 109.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 109.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 109.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 109.2
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 109.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 108.9
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 108.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 108.1
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 107.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 107.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 107.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 107.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 106.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 106.7
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 106.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 106.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 104.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 104.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 104.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 104.2
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 104.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 103.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 102.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 102.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 101.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 101.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 101.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 101.3
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 100.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 100.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 100.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 99.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 98.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 97.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 97.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 97.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 97.3
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.0
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 96.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 96.1
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 95.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 95.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 95.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 95.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 94.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 94.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 94.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 94.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 93.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 93.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 92.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 92.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 92.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 92.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 92.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 91.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 91.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 90.4
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 89.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 89.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 88.9
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 88.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 88.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 88.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 88.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 88.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 87.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 87.2
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 86.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 86.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 86.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 86.2
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 86.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 86.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 85.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 85.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 85.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 84.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 82.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 81.1
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 79.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 78.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 78.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 77.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 76.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 76.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 76.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 76.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 76.2
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 75.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 75.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 72.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 72.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 71.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 71.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 69.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 68.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 68.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 65.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 61.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 61.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 60.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 60.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 59.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 56.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 55.6
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 55.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 53.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 53.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 52.3
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 46.7
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

371.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 371.3
FF:10164-103B2 76 years, female 371.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

304.6
Pig sample Sample description nTPM
Caudate
nTPM: 304.6
Samples: 4

Max nTPM: 378.6
Min nTPM: 236.9
Sample A Female 236.9
Sample B Female 299.3
Sample C Male 378.6
Sample D Male 303.7

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