PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:193.5 nTPM
FANTOM5:168.8 Scaled Tags Per Million
Pig:78.8 nTPM
Mouse:35.7 nTPM
Allen mouse:7.3 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 193.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 175.3
2188 Female, age 91, both hemispheres 210.3
2090 Male, age 80, both hemispheres 177.9
2301 Female, age 85, both hemispheres 163.8
1984 Male, age 76, both hemispheres 149.4
Area postrema
nTPM: 161.6
2306 Male, age 80, both hemispheres 184.5
2799 Male, age 61, both hemispheres 170.2
2054 Male, age 76, both hemispheres 130.1
Dorsal cochlear nucleus
nTPM: 151.7
2802 Male, age 74, right hemisphere 169.6
2378 Male, age 80, both hemispheres 162.0
2187 Female, age 91, both hemispheres 158.6
2058 Male, age 76, both hemispheres 139.1
2370 Male, age 61, both hemispheres 129.1
Dorsal medullary reticular nucleus
nTPM: 144.1
2088 Male, age 76, both hemispheres 158.7
2040 Female, age 85, both hemispheres 142.3
2373 Male, age 61, both hemispheres 131.4
Dorsal motor vagal complex
nTPM: 142.3
2185 Male, age 76, both hemispheres 192.2
2797 Male, age 61, both hemispheres 156.6
2807 Female, age 85, both hemispheres 153.3
2643 Male, age 74, both hemispheres 148.3
2000 Male, age 74, unknown 129.8
2133 Female, age 91, both hemispheres 126.3
2813 Female, age 72, unknown 121.6
2844 Male, age 55, unknown 110.1
Dorsal tegmental nucleus
nTPM: 141.4
2326 Male, age 74, both hemispheres 155.9
2083 Male, age 80, both hemispheres 153.7
1936 Male, age 76, left hemisphere 130.4
2358 Male, age 61, both hemispheres 125.5
Dorsolateral tegmental area
nTPM: 139.6
2337 Male, age 61, both hemispheres 160.9
2654 Male, age 80, both hemispheres 160.7
2751 Female, age 85, both hemispheres 159.6
2360 Male, age 74, both hemispheres 121.2
2141 Male, age 76, both hemispheres 95.8
Gigantocellular reticular nuclei, medullary
nTPM: 148.7
2387 Female, age 91, both hemispheres 191.5
2314 Male, age 61, both hemispheres 162.2
1876 Female, age 85, both hemispheres 154.9
2022 Male, age 76, right hemisphere 147.6
2310 Male, age 80, both hemispheres 126.1
2462 Male, age 74, both hemispheres 109.9
Gigantocellular reticular nuclei, pars
nTPM: 135.2
2706 Male, age 80, both hemispheres 148.5
2330 Male, age 80, both hemispheres 141.6
2336 Male, age 61, both hemispheres 136.1
2084 Female, age 85, both hemispheres 130.7
2168 Male, age 76, both hemispheres 119.2
Inferior olive
nTPM: 162.0
2628 Female, age 91, both hemispheres 175.4
2563 Male, age 74, both hemispheres 167.8
2379 Male, age 80, both hemispheres 159.5
2178 Male, age 61, both hemispheres 156.2
2085 Female, age 85, both hemispheres 151.2
Kolliker-Fuse nucleus
nTPM: 156.2
2793 Female, age 91, left hemisphere 200.0
2315 Male, age 76, right hemisphere 138.7
2163 Male, age 80, both hemispheres 129.9
Lateral lemniscal nuclei
nTPM: 143.0
2320 Female, age 91, left hemisphere 174.3
2453 Male, age 74, right hemisphere 141.3
2036 Male, age 80, both hemispheres 139.6
2169 Male, age 76, both hemispheres 130.7
2746 Female, age 85, left hemisphere 128.8
Lateral medullary reticular nucleus
nTPM: 157.4
2852 Male, age 80, both hemispheres 173.2
2305 Male, age 74, both hemispheres 168.2
2374 Male, age 61, both hemispheres 156.6
2190 Female, age 85, both hemispheres 155.5
2804 Female, age 91, both hemispheres 147.0
2044 Male, age 76, both hemispheres 143.6
Lateral parabrachial nucleus
nTPM: 159.0
2792 Male, age 76, both hemispheres 193.0
2790 Male, age 61, both hemispheres 172.4
2013 Male, age 80, both hemispheres 154.0
2139 Female, age 85, right hemisphere 116.5
Lateral vestibular nucleus
nTPM: 135.6
2311 Male, age 80, both hemispheres 143.0
2184 Male, age 76, both hemispheres 128.3
Locus coeruleus
nTPM: 111.5
2720 Male, age 74, both hemispheres 137.7
2788 Male, age 74, unknown 125.5
2014 Male, age 55, unknown 120.6
2162 Male, age 80, both hemispheres 112.4
2317 Female, age 72, unknown 106.3
2123 Female, age 91, both hemispheres 92.7
1980 Male, age 76, both hemispheres 85.4
Medial olivary nucleus
nTPM: 176.0
1962 Male, age 76, both hemispheres 189.5
1943 Male, age 61, both hemispheres 188.5
2138 Female, age 91, both hemispheres 168.3
2851 Male, age 80, both hemispheres 157.8
Medial parabrachial nucleus
nTPM: 147.1
2463 Female, age 85, right hemisphere 155.0
2170 Female, age 91, both hemispheres 150.8
2854 Male, age 80, both hemispheres 147.2
2156 Male, age 61, both hemispheres 143.9
2786 Male, age 76, both hemispheres 138.7
Medial periolivary nuclei
nTPM: 141.6
2458 Female, age 91, both hemispheres 171.4
2081 Male, age 80, both hemispheres 164.2
2791 Male, age 74, right hemisphere 147.1
2063 Male, age 76, both hemispheres 124.1
2171 Female, age 85, both hemispheres 101.4
Medial vestibular nucleus
nTPM: 133.5
2803 Female, age 91, both hemispheres 168.3
2801 Male, age 74, both hemispheres 152.1
2093 Male, age 80, both hemispheres 144.4
2624 Male, age 61, both hemispheres 127.8
2743 Female, age 85, both hemispheres 111.3
2134 Male, age 76, both hemispheres 97.2
Motor facial nucleus
nTPM: 141.2
2697 Female, age 85, both hemispheres 164.5
2795 Female, age 91, both hemispheres 153.5
2365 Male, age 74, right hemisphere 151.4
2126 Male, age 61, both hemispheres 137.0
2327 Male, age 80, both hemispheres 127.1
2062 Male, age 76, both hemispheres 113.4
Motor hypoglossal nucleus
nTPM: 142.4
2182 Male, age 80, both hemispheres 159.2
2125 Female, age 91, both hemispheres 157.7
2132 Female, age 85, both hemispheres 156.1
2461 Male, age 61, both hemispheres 126.5
2277 Male, age 76, both hemispheres 112.7
Motor trigeminal nucleus
nTPM: 142.8
2321 Female, age 91, both hemispheres 166.0
2560 Male, age 74, both hemispheres 155.1
2309 Male, age 76, both hemispheres 148.3
2079 Male, age 80, both hemispheres 128.5
2335 Male, age 61, both hemispheres 116.0
Nuclei of the trapezoid body
nTPM: 132.2
2368 Female, age 91, both hemispheres 162.1
2166 Male, age 80, both hemispheres 159.1
2159 Male, age 61, both hemispheres 121.1
1983 Male, age 76, both hemispheres 120.9
2735 Female, age 85, both hemispheres 97.6
Nucleus ambiguus
nTPM: 148.3
2071 Male, age 76, both hemispheres 200.4
2096 Female, age 85, both hemispheres 96.2
Nucleus cuneatus
nTPM: 162.5
2380 Male, age 80, both hemispheres 196.3
2808 Female, age 85, both hemispheres 183.6
2805 Female, age 91, both hemispheres 173.2
2381 Male, age 80, both hemispheres 171.2
2100 Male, age 76, both hemispheres 169.6
2564 Male, age 74, both hemispheres 154.4
2376 Male, age 61, both hemispheres 142.0
2131 Male, age 76, both hemispheres 138.7
2562 Male, age 61, both hemispheres 133.1
Nucleus gracilis
nTPM: 193.5
2382 Male, age 80, both hemispheres 220.1
2299 Female, age 85, both hemispheres 180.4
2627 Male, age 74, both hemispheres 180.1
Nucleus raphe magnus
nTPM: 128.1
2459 Female, age 91, both hemispheres 168.1
2328 Male, age 80, both hemispheres 142.4
2051 Male, age 76, both hemispheres 138.6
2455 Male, age 74, both hemispheres 136.1
2160 Male, age 61, both hemispheres 98.2
2172 Female, age 85, both hemispheres 85.1
Nucleus raphe obscurus
nTPM: 183.0
2142 Male, age 76, midline 205.0
2845 Female, age 85, midline 190.7
2800 Male, age 61, midline 153.1
Nucleus raphe pallidus
nTPM: 173.7
2145 Male, age 76, midline 201.1
1924 Male, age 61, midline 175.6
2183 Male, age 80, midline 144.6
Nucleus tractus solitarii
nTPM: 114.4
2144 Female, age 91, right hemisphere 135.0
2656 Male, age 76, both hemispheres 117.1
2191 Female, age 85, both hemispheres 110.5
2307 Male, age 80, both hemispheres 95.0
Paramedian reticular nucleus
nTPM: 144.0
2052 Male, age 76, both hemispheres 182.8
2057 Male, age 80, both hemispheres 144.4
2050 Female, age 85, both hemispheres 126.6
2313 Male, age 61, both hemispheres 122.1
Parvicellular reticular nuclei
nTPM: 144.7
2095 Male, age 76, both hemispheres 155.6
2119 Male, age 80, both hemispheres 145.1
2558 Male, age 74, both hemispheres 133.3
Parvicellular reticular nuclei, medullary
nTPM: 136.0
2189 Female, age 91, both hemispheres 145.4
2091 Female, age 85, both hemispheres 132.7
2181 Male, age 80, left hemisphere 129.9
Pedunculopontine tegmental nucleus
nTPM: 142.4
2338 Male, age 61, both hemispheres 164.5
2334 Male, age 80, both hemispheres 142.0
1921 Female, age 85, both hemispheres 120.8
Peritrigeminal nucleus
nTPM: 138.8
2136 Male, age 76, both hemispheres 146.8
2067 Female, age 85, both hemispheres 139.9
2179 Male, age 61, both hemispheres 129.6
Pontine nuclei
nTPM: 147.2
2319 Female, age 91, both hemispheres 186.3
2454 Male, age 74, left hemisphere 183.6
2109 Female, age 72, unknown 151.2
2115 Male, age 80, left hemisphere 150.2
1968 Male, age 76, left hemisphere 149.9
1863 Male, age 55, unknown 144.2
2727 Male, age 61, right hemisphere 111.4
2787 Female, age 85, both hemispheres 100.8
Pontine raphe nucleus
nTPM: 110.3
2853 Male, age 76, midline 111.9
2122 Female, age 85, midline 108.8
Posteroventral cochlear nucleus
nTPM: 175.1
2135 Female, age 91, both hemispheres 231.6
2341 Male, age 80, both hemispheres 209.1
2070 Male, age 76, both hemispheres 163.1
2371 Male, age 61, both hemispheres 147.2
2752 Female, age 85, both hemispheres 124.5
Prepositus hypoglossal nucleus
nTPM: 132.0
2855 Female, age 85, right hemisphere 148.0
2086 Male, age 80, both hemispheres 116.0
Principal sensory trigeminal nucleus
nTPM: 134.1
2367 Female, age 91, left hemisphere 174.6
2324 Male, age 76, both hemispheres 128.8
2008 Male, age 80, left hemisphere 119.2
2158 Male, age 61, both hemispheres 113.9
Reticular pontine nucleus, caudal
nTPM: 157.7
2457 Female, age 91, both hemispheres 189.5
2559 Male, age 74, both hemispheres 173.3
2092 Male, age 76, both hemispheres 152.0
2332 Male, age 80, right hemisphere 116.1
Reticular pontine nucleus, oral
nTPM: 157.0
2366 Female, age 91, both hemispheres 203.7
2361 Male, age 74, both hemispheres 155.4
1939 Male, age 80, both hemispheres 148.9
2167 Male, age 76, both hemispheres 146.2
2012 Female, age 85, both hemispheres 130.6
Reticulotegmental nucleus
nTPM: 132.3
2322 Female, age 91, both hemispheres 149.7
2452 Male, age 74, both hemispheres 146.1
2333 Male, age 80, both hemispheres 128.4
2325 Male, age 76, both hemispheres 105.0
Spinal trigeminal nucleus, caudal
nTPM: 146.3
2312 Male, age 61, both hemispheres 153.7
2642 Male, age 74, both hemispheres 153.2
2308 Male, age 80, both hemispheres 149.1
2447 Male, age 76, both hemispheres 140.6
2390 Female, age 91, both hemispheres 134.8
Spinal trigeminal nucleus, interpolar
nTPM: 132.5
2389 Female, age 91, both hemispheres 156.9
2386 Female, age 85, both hemispheres 142.2
2033 Male, age 80, both hemispheres 132.4
2625 Male, age 61, both hemispheres 117.1
2066 Male, age 76, right hemisphere 113.9
Spinal trigeminal nucleus, oral
nTPM: 128.1
1978 Male, age 76, both hemispheres 140.4
2164 Male, age 80, both hemispheres 127.3
2737 Female, age 85, both hemispheres 116.7
Spinal vestibular nucleus
nTPM: 155.8
2384 Male, age 74, both hemispheres 188.1
2748 Male, age 76, both hemispheres 169.4
2806 Female, age 85, both hemispheres 165.3
2186 Female, age 91, both hemispheres 155.5
2780 Male, age 80, both hemispheres 136.2
2796 Male, age 61, both hemispheres 120.4
Subcoeruleus area
nTPM: 141.8
2369 Female, age 85, left hemisphere 182.5
2451 Male, age 74, both hemispheres 146.1
2089 Male, age 76, left hemisphere 138.1
1958 Male, age 80, both hemispheres 131.5
2323 Female, age 91, left hemisphere 111.1
Superior olive
nTPM: 155.3
2020 Male, age 76, both hemispheres 177.5
2561 Female, age 91, both hemispheres 170.3
2364 Male, age 74, right hemisphere 152.7
2329 Male, age 80, right hemisphere 146.8
1875 Female, age 85, both hemispheres 129.0
Superior vestibular nucleus
nTPM: 132.6
2015 Male, age 80, both hemispheres 139.2
2383 Male, age 74, both hemispheres 137.8
2061 Male, age 76, both hemispheres 120.9
Ventral medullary reticular nucleus
nTPM: 155.6
2060 Male, age 76, both hemispheres 157.8
2372 Male, age 61, both hemispheres 153.5
Ventral periolivary nuclei
nTPM: 142.6
2023 Male, age 76, both hemispheres 190.1
2794 Female, age 91, left hemisphere 147.1
2165 Male, age 80, both hemispheres 127.1
2130 Female, age 85, both hemispheres 106.1
Ventrolateral medulla, A1-C1 cell groups
nTPM: 143.6
2118 Male, age 80, both hemispheres 166.5
2302 Female, age 91, both hemispheres 142.7
1986 Male, age 76, both hemispheres 142.6
2180 Male, age 61, both hemispheres 138.1
2741 Female, age 85, both hemispheres 128.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 146.1
2456 Female, age 91, both hemispheres 176.4
1959 Male, age 76, both hemispheres 153.1
2840 Female, age 85, both hemispheres 145.0
2449 Male, age 74, both hemispheres 135.4
2161 Male, age 80, both hemispheres 134.6
2359 Male, age 61, both hemispheres 132.1

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 168.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 168.8
FF:10182-103D2 60 years, female 180.4
FF:10165-103B3 76 years, female 157.2
Medulla oblongata
Scaled Tags Per Million: 134.8
FF:10155-103A2 76 years, female 155.4
FF:10038-101F2 18-64 years, mixed 134.8
FF:10174-103C3 60 years, female 114.2
Pons
Scaled Tags Per Million: 160.4
FF:10033-101E6 18-54 years, mixed 160.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 78.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 78.9
Samples: 4

Max nTPM: 85.1
Min nTPM: 70.3
Sample A Female 85.1
Sample B Female 70.3
Sample C Male 79.3
Sample D Male 80.7
Pons
nTPM: 62.3
Samples: 4

Max nTPM: 71.8
Min nTPM: 56.9
Sample A Female 59.2
Sample B Female 61.4
Sample C Male 56.9
Sample D Male 71.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 35.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 35.7
Samples: 4

Max nTPM: 39.3
Min nTPM: 30.0
Sample A Male 37.7
Sample B Male 39.3
Sample C Female 30.0
Sample D Female 35.8

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.3
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.3
69526809 Antisense, RP_050421_01_F10, Mouse strain C57BL/6J (56 days, male) 7.3
Pons
Expression energy: 7.2
69526809 Antisense, RP_050421_01_F10, Mouse strain C57BL/6J (56 days, male) 7.2

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