PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:131.1 nTPM
FANTOM5:279.3 Scaled Tags Per Million
Pig:133.4 nTPM
Mouse:20.7 nTPM
Allen mouse:6.1 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 131.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 108.9
2188 Female, age 91, both hemispheres 133.0
2301 Female, age 85, both hemispheres 124.2
2090 Male, age 80, both hemispheres 109.3
1984 Male, age 76, both hemispheres 69.0
Area postrema
nTPM: 117.3
2054 Male, age 76, both hemispheres 144.6
2306 Male, age 80, both hemispheres 125.0
2799 Male, age 61, both hemispheres 82.3
Dorsal cochlear nucleus
nTPM: 95.8
2187 Female, age 91, both hemispheres 108.4
2378 Male, age 80, both hemispheres 105.7
2370 Male, age 61, both hemispheres 92.5
2802 Male, age 74, right hemisphere 90.7
2058 Male, age 76, both hemispheres 81.5
Dorsal medullary reticular nucleus
nTPM: 98.3
2373 Male, age 61, both hemispheres 105.4
2088 Male, age 76, both hemispheres 98.0
2040 Female, age 85, both hemispheres 91.7
Dorsal motor vagal complex
nTPM: 90.5
2807 Female, age 85, both hemispheres 136.3
2185 Male, age 76, both hemispheres 115.9
2813 Female, age 72, unknown 100.4
2000 Male, age 74, unknown 87.4
2133 Female, age 91, both hemispheres 77.7
2844 Male, age 55, unknown 77.6
2643 Male, age 74, both hemispheres 73.7
2797 Male, age 61, both hemispheres 55.1
Dorsal tegmental nucleus
nTPM: 98.7
2083 Male, age 80, both hemispheres 114.0
2358 Male, age 61, both hemispheres 106.6
2326 Male, age 74, both hemispheres 88.5
1936 Male, age 76, left hemisphere 85.6
Dorsolateral tegmental area
nTPM: 109.4
2337 Male, age 61, both hemispheres 142.9
2654 Male, age 80, both hemispheres 127.0
2360 Male, age 74, both hemispheres 96.5
2141 Male, age 76, both hemispheres 94.0
2751 Female, age 85, both hemispheres 86.7
Gigantocellular reticular nuclei, medullary
nTPM: 103.3
2387 Female, age 91, both hemispheres 145.4
2314 Male, age 61, both hemispheres 124.0
1876 Female, age 85, both hemispheres 101.3
2022 Male, age 76, right hemisphere 90.4
2310 Male, age 80, both hemispheres 88.2
2462 Male, age 74, both hemispheres 70.3
Gigantocellular reticular nuclei, pars
nTPM: 94.9
2706 Male, age 80, both hemispheres 111.2
2336 Male, age 61, both hemispheres 107.6
2330 Male, age 80, both hemispheres 96.2
2084 Female, age 85, both hemispheres 92.1
2168 Male, age 76, both hemispheres 67.3
Inferior olive
nTPM: 118.1
2628 Female, age 91, both hemispheres 151.9
2178 Male, age 61, both hemispheres 139.5
2379 Male, age 80, both hemispheres 122.3
2563 Male, age 74, both hemispheres 92.1
2085 Female, age 85, both hemispheres 84.8
Kolliker-Fuse nucleus
nTPM: 125.3
2793 Female, age 91, left hemisphere 166.6
2315 Male, age 76, right hemisphere 112.5
2163 Male, age 80, both hemispheres 96.7
Lateral lemniscal nuclei
nTPM: 95.7
2320 Female, age 91, left hemisphere 122.9
2036 Male, age 80, both hemispheres 105.9
2746 Female, age 85, left hemisphere 93.7
2453 Male, age 74, right hemisphere 82.5
2169 Male, age 76, both hemispheres 73.7
Lateral medullary reticular nucleus
nTPM: 123.8
2374 Male, age 61, both hemispheres 154.8
2852 Male, age 80, both hemispheres 147.8
2804 Female, age 91, both hemispheres 118.3
2044 Male, age 76, both hemispheres 112.5
2305 Male, age 74, both hemispheres 105.8
2190 Female, age 85, both hemispheres 103.2
Lateral parabrachial nucleus
nTPM: 108.5
2792 Male, age 76, both hemispheres 134.3
2013 Male, age 80, both hemispheres 122.2
2790 Male, age 61, both hemispheres 89.6
2139 Female, age 85, right hemisphere 87.9
Lateral vestibular nucleus
nTPM: 87.9
2311 Male, age 80, both hemispheres 88.6
2184 Male, age 76, both hemispheres 87.2
Locus coeruleus
nTPM: 68.9
2720 Male, age 74, both hemispheres 80.0
2162 Male, age 80, both hemispheres 77.3
2123 Female, age 91, both hemispheres 70.2
2317 Female, age 72, unknown 68.2
2014 Male, age 55, unknown 64.2
1980 Male, age 76, both hemispheres 62.2
2788 Male, age 74, unknown 59.8
Medial olivary nucleus
nTPM: 131.1
1943 Male, age 61, both hemispheres 166.9
2851 Male, age 80, both hemispheres 130.9
1962 Male, age 76, both hemispheres 124.6
2138 Female, age 91, both hemispheres 101.8
Medial parabrachial nucleus
nTPM: 92.0
2854 Male, age 80, both hemispheres 108.9
2170 Female, age 91, both hemispheres 100.8
2786 Male, age 76, both hemispheres 96.6
2463 Female, age 85, right hemisphere 92.1
2156 Male, age 61, both hemispheres 61.6
Medial periolivary nuclei
nTPM: 97.5
2458 Female, age 91, both hemispheres 142.7
2081 Male, age 80, both hemispheres 117.2
2791 Male, age 74, right hemisphere 89.4
2171 Female, age 85, both hemispheres 71.7
2063 Male, age 76, both hemispheres 66.4
Medial vestibular nucleus
nTPM: 92.0
2624 Male, age 61, both hemispheres 116.4
2803 Female, age 91, both hemispheres 111.4
2801 Male, age 74, both hemispheres 103.3
2093 Male, age 80, both hemispheres 80.5
2743 Female, age 85, both hemispheres 71.5
2134 Male, age 76, both hemispheres 68.9
Motor facial nucleus
nTPM: 102.2
2697 Female, age 85, both hemispheres 135.5
2126 Male, age 61, both hemispheres 119.6
2795 Female, age 91, both hemispheres 116.0
2365 Male, age 74, right hemisphere 96.0
2327 Male, age 80, both hemispheres 80.1
2062 Male, age 76, both hemispheres 66.0
Motor hypoglossal nucleus
nTPM: 109.9
2182 Male, age 80, both hemispheres 145.1
2277 Male, age 76, both hemispheres 108.0
2461 Male, age 61, both hemispheres 106.4
2125 Female, age 91, both hemispheres 95.9
2132 Female, age 85, both hemispheres 94.1
Motor trigeminal nucleus
nTPM: 110.2
2321 Female, age 91, both hemispheres 139.9
2560 Male, age 74, both hemispheres 118.6
2309 Male, age 76, both hemispheres 99.4
2335 Male, age 61, both hemispheres 98.9
2079 Male, age 80, both hemispheres 94.3
Nuclei of the trapezoid body
nTPM: 98.5
2368 Female, age 91, both hemispheres 127.8
2166 Male, age 80, both hemispheres 118.5
2159 Male, age 61, both hemispheres 103.8
2735 Female, age 85, both hemispheres 74.3
1983 Male, age 76, both hemispheres 67.9
Nucleus ambiguus
nTPM: 103.5
2071 Male, age 76, both hemispheres 116.9
2096 Female, age 85, both hemispheres 90.1
Nucleus cuneatus
nTPM: 115.1
2380 Male, age 80, both hemispheres 144.4
2805 Female, age 91, both hemispheres 144.2
2808 Female, age 85, both hemispheres 131.2
2381 Male, age 80, both hemispheres 123.7
2376 Male, age 61, both hemispheres 113.3
2100 Male, age 76, both hemispheres 109.5
2131 Male, age 76, both hemispheres 101.6
2564 Male, age 74, both hemispheres 89.1
2562 Male, age 61, both hemispheres 78.9
Nucleus gracilis
nTPM: 128.5
2382 Male, age 80, both hemispheres 157.9
2299 Female, age 85, both hemispheres 118.6
2627 Male, age 74, both hemispheres 109.0
Nucleus raphe magnus
nTPM: 90.7
2459 Female, age 91, both hemispheres 127.2
2328 Male, age 80, both hemispheres 101.3
2051 Male, age 76, both hemispheres 92.3
2455 Male, age 74, both hemispheres 81.7
2160 Male, age 61, both hemispheres 74.8
2172 Female, age 85, both hemispheres 66.6
Nucleus raphe obscurus
nTPM: 123.8
2800 Male, age 61, midline 133.7
2142 Male, age 76, midline 128.4
2845 Female, age 85, midline 109.1
Nucleus raphe pallidus
nTPM: 125.9
1924 Male, age 61, midline 185.9
2183 Male, age 80, midline 100.7
2145 Male, age 76, midline 91.2
Nucleus tractus solitarii
nTPM: 91.3
2191 Female, age 85, both hemispheres 107.9
2656 Male, age 76, both hemispheres 103.3
2307 Male, age 80, both hemispheres 94.4
2144 Female, age 91, right hemisphere 59.4
Paramedian reticular nucleus
nTPM: 98.9
2052 Male, age 76, both hemispheres 113.6
2050 Female, age 85, both hemispheres 102.2
2057 Male, age 80, both hemispheres 96.7
2313 Male, age 61, both hemispheres 83.0
Parvicellular reticular nuclei
nTPM: 100.9
2558 Male, age 74, both hemispheres 116.8
2095 Male, age 76, both hemispheres 93.1
2119 Male, age 80, both hemispheres 92.8
Parvicellular reticular nuclei, medullary
nTPM: 87.5
2189 Female, age 91, both hemispheres 93.5
2091 Female, age 85, both hemispheres 85.5
2181 Male, age 80, left hemisphere 83.4
Pedunculopontine tegmental nucleus
nTPM: 90.1
2338 Male, age 61, both hemispheres 113.5
2334 Male, age 80, both hemispheres 85.4
1921 Female, age 85, both hemispheres 71.5
Peritrigeminal nucleus
nTPM: 102.0
2179 Male, age 61, both hemispheres 106.6
2067 Female, age 85, both hemispheres 103.3
2136 Male, age 76, both hemispheres 96.3
Pontine nuclei
nTPM: 100.1
2115 Male, age 80, left hemisphere 140.3
2319 Female, age 91, both hemispheres 118.5
2454 Male, age 74, left hemisphere 114.6
1968 Male, age 76, left hemisphere 92.7
2787 Female, age 85, both hemispheres 91.3
2109 Female, age 72, unknown 83.9
1863 Male, age 55, unknown 81.7
2727 Male, age 61, right hemisphere 78.0
Pontine raphe nucleus
nTPM: 82.2
2853 Male, age 76, midline 94.0
2122 Female, age 85, midline 70.4
Posteroventral cochlear nucleus
nTPM: 101.3
2135 Female, age 91, both hemispheres 144.1
2341 Male, age 80, both hemispheres 100.4
2070 Male, age 76, both hemispheres 95.3
2752 Female, age 85, both hemispheres 84.9
2371 Male, age 61, both hemispheres 81.9
Prepositus hypoglossal nucleus
nTPM: 84.8
2855 Female, age 85, right hemisphere 90.0
2086 Male, age 80, both hemispheres 79.5
Principal sensory trigeminal nucleus
nTPM: 101.0
2367 Female, age 91, left hemisphere 135.1
2008 Male, age 80, left hemisphere 92.4
2324 Male, age 76, both hemispheres 89.6
2158 Male, age 61, both hemispheres 86.8
Reticular pontine nucleus, caudal
nTPM: 113.0
2457 Female, age 91, both hemispheres 140.1
2559 Male, age 74, both hemispheres 120.8
2332 Male, age 80, right hemisphere 104.1
2092 Male, age 76, both hemispheres 86.9
Reticular pontine nucleus, oral
nTPM: 111.3
2366 Female, age 91, both hemispheres 151.2
2361 Male, age 74, both hemispheres 118.6
1939 Male, age 80, both hemispheres 99.7
2167 Male, age 76, both hemispheres 94.5
2012 Female, age 85, both hemispheres 92.6
Reticulotegmental nucleus
nTPM: 92.5
2322 Female, age 91, both hemispheres 105.3
2333 Male, age 80, both hemispheres 94.7
2452 Male, age 74, both hemispheres 94.1
2325 Male, age 76, both hemispheres 75.9
Spinal trigeminal nucleus, caudal
nTPM: 102.8
2312 Male, age 61, both hemispheres 125.6
2308 Male, age 80, both hemispheres 105.1
2642 Male, age 74, both hemispheres 100.1
2390 Female, age 91, both hemispheres 95.1
2447 Male, age 76, both hemispheres 88.0
Spinal trigeminal nucleus, interpolar
nTPM: 95.5
2389 Female, age 91, both hemispheres 117.7
2386 Female, age 85, both hemispheres 101.0
2033 Male, age 80, both hemispheres 97.8
2625 Male, age 61, both hemispheres 90.9
2066 Male, age 76, right hemisphere 69.9
Spinal trigeminal nucleus, oral
nTPM: 79.6
2164 Male, age 80, both hemispheres 93.0
1978 Male, age 76, both hemispheres 75.7
2737 Female, age 85, both hemispheres 70.2
Spinal vestibular nucleus
nTPM: 98.9
2748 Male, age 76, both hemispheres 107.1
2384 Male, age 74, both hemispheres 104.3
2806 Female, age 85, both hemispheres 103.2
2186 Female, age 91, both hemispheres 99.0
2780 Male, age 80, both hemispheres 90.3
2796 Male, age 61, both hemispheres 89.2
Subcoeruleus area
nTPM: 83.8
2369 Female, age 85, left hemisphere 93.4
1958 Male, age 80, both hemispheres 89.0
2089 Male, age 76, left hemisphere 80.2
2451 Male, age 74, both hemispheres 79.1
2323 Female, age 91, left hemisphere 77.1
Superior olive
nTPM: 115.2
2561 Female, age 91, both hemispheres 151.4
2020 Male, age 76, both hemispheres 117.4
2329 Male, age 80, right hemisphere 109.0
2364 Male, age 74, right hemisphere 101.2
1875 Female, age 85, both hemispheres 97.2
Superior vestibular nucleus
nTPM: 100.5
2061 Male, age 76, both hemispheres 105.1
2015 Male, age 80, both hemispheres 98.9
2383 Male, age 74, both hemispheres 97.4
Ventral medullary reticular nucleus
nTPM: 115.1
2372 Male, age 61, both hemispheres 128.9
2060 Male, age 76, both hemispheres 101.2
Ventral periolivary nuclei
nTPM: 103.6
2794 Female, age 91, left hemisphere 134.8
2023 Male, age 76, both hemispheres 107.0
2130 Female, age 85, both hemispheres 86.9
2165 Male, age 80, both hemispheres 85.8
Ventrolateral medulla, A1-C1 cell groups
nTPM: 95.7
2180 Male, age 61, both hemispheres 111.5
2118 Male, age 80, both hemispheres 104.6
1986 Male, age 76, both hemispheres 95.0
2302 Female, age 91, both hemispheres 94.8
2741 Female, age 85, both hemispheres 72.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 99.6
2456 Female, age 91, both hemispheres 119.6
2359 Male, age 61, both hemispheres 111.3
2840 Female, age 85, both hemispheres 107.6
2161 Male, age 80, both hemispheres 100.4
2449 Male, age 74, both hemispheres 81.0
1959 Male, age 76, both hemispheres 77.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 279.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 279.3
FF:10182-103D2 60 years, female 312.7
FF:10165-103B3 76 years, female 246.0
Medulla oblongata
Scaled Tags Per Million: 260.6
FF:10174-103C3 60 years, female 285.2
FF:10038-101F2 18-64 years, mixed 264.5
FF:10155-103A2 76 years, female 232.2
Pons
Scaled Tags Per Million: 271.5
FF:10033-101E6 18-54 years, mixed 271.5

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 133.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 133.4
Samples: 4

Max nTPM: 150.1
Min nTPM: 114.0
Sample A Female 150.1
Sample B Female 129.8
Sample C Male 114.0
Sample D Male 139.7
Pons
nTPM: 100.5
Samples: 4

Max nTPM: 121.4
Min nTPM: 72.2
Sample A Female 72.2
Sample B Female 121.4
Sample C Male 93.8
Sample D Male 114.5

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 20.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 20.8
Samples: 4

Max nTPM: 23.2
Min nTPM: 18.5
Sample A Male 18.5
Sample B Male 22.0
Sample C Female 23.2
Sample D Female 19.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 6.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 6.1
68666589 Antisense, RP_050203_01_E02, Mouse strain C57BL/6J (56 days, male) 6.1
Pons
Expression energy: 5.9
68666589 Antisense, RP_050203_01_E02, Mouse strain C57BL/6J (56 days, male) 5.9

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