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RPL34
HPA
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  • RPL34
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:1323.2 nTPM
FANTOM5:27.0 Scaled Tags Per Million
Pig:312.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA035139
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

1323.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 1323.2
Samples: 246

Max nTPM: 4379.8
Min nTPM: 607.1
Std nTPM: 472.4
Median nTPM: 1222.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 4379.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 3165.4
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 3124.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 3020.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 2788.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 2645.5
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 2614.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 2548.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 2461.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 2382.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 2309.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 2278.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 2258.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 2179.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 2121.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 2019.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 1994.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1939.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 1911.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 1883.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 1882.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1878.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 1855.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 1851.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 1848.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1843.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 1840.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 1832.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 1816.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 1814.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 1793.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 1778.1
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 1764.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1752.5
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 1729.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 1721.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1711.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 1700.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1699.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 1682.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1674.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 1668.5
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 1639.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 1631.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 1613.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 1601.4
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1590.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 1588.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 1585.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 1564.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 1550.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 1533.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 1518.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 1517.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 1512.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 1496.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 1486.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 1480.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1474.3
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 1473.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 1472.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 1463.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 1463.1
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 1462.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 1457.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 1441.8
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 1440.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 1432.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1430.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1430.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 1428.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 1417.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 1414.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 1413.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 1411.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 1406.9
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 1399.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 1386.5
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 1385.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 1375.3
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 1372.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 1365.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1359.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 1354.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 1346.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 1343.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 1343.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 1343.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 1338.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 1334.9
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1331.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 1323.9
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 1309.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 1304.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 1300.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 1298.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 1297.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 1296.0
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 1295.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 1294.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 1289.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 1284.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 1281.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 1280.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 1273.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 1272.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 1272.0
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 1270.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 1269.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 1264.9
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1264.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 1258.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 1255.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1252.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 1251.1
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1247.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 1233.4
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1231.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 1231.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 1229.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 1228.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 1227.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 1223.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 1221.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 1220.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 1217.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1216.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 1211.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 1203.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 1201.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 1200.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1200.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 1197.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 1197.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 1187.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 1185.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 1185.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 1185.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 1183.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 1183.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1180.6
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 1178.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1178.3
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 1177.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 1173.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1172.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 1171.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1165.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1160.4
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 1149.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1144.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 1140.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1135.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 1130.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 1119.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 1117.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 1113.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 1113.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 1111.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 1109.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1108.1
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 1107.0
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 1103.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1100.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 1088.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 1086.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 1083.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 1083.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 1080.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 1080.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 1074.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 1070.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 1069.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 1068.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 1064.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 1060.9
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 1058.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 1057.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 1054.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 1052.6
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 1049.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 1045.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 1045.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1042.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 1039.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 1029.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 1029.3
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 1010.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1010.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 999.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 999.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 996.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 995.5
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 990.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 989.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 986.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 984.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 983.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 979.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 979.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 978.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 977.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 975.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 974.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 953.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 953.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 952.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 950.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 940.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 936.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 932.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 924.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 924.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 915.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 914.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 914.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 903.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 897.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 893.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 890.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 887.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 885.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 881.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 878.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 874.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 863.4
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 863.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 847.8
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 843.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 835.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 810.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 805.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 800.6
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 799.1
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 798.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 795.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 783.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 780.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 777.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 743.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 741.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 736.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 729.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 723.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 616.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 607.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

27.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 27.0
FF:10164-103B2 76 years, female 27.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

312.9
Pig sample Sample description nTPM
Caudate
nTPM: 312.9
Samples: 4

Max nTPM: 356.1
Min nTPM: 276.1
Sample A Female 356.1
Sample B Female 306.8
Sample C Male 312.5
Sample D Male 276.1

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