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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:63.1 nTPM
FANTOM5:119.8 Scaled Tags Per Million
Pig:70.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA038051Antibody HPA059070Antibody CAB012448
Glial cells HighHighHigh
Neuronal cells HighMediumHigh






CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

63.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 63.1
Samples: 246

Max nTPM: 104.1
Min nTPM: 36.2
Std nTPM: 12.3
Median nTPM: 62.8
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 104.1
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 103.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 101.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 100.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 96.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 92.4
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 91.6
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 90.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 89.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 87.5
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 85.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 83.8
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 83.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 83.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 82.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 81.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 81.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 80.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 79.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 79.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 79.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 79.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 79.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 79.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 78.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 77.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 76.5
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 76.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 75.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 75.5
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 75.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 75.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 75.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 74.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 74.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 74.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 74.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 74.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 74.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 74.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 74.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 73.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 73.8
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 73.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 73.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 73.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 72.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 72.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 72.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 72.6
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 71.6
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 71.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 71.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 71.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 71.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 71.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 71.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 71.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 70.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 70.6
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 70.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 70.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 70.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 70.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 69.5
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 69.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 69.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 69.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 68.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 68.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 68.7
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 68.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 68.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 68.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 68.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 68.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 68.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 67.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 67.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 67.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 67.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 67.5
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 67.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 67.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 67.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 67.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 66.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 66.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 66.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 66.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 66.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 65.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 65.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 65.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 65.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 65.4
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 65.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 65.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 65.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 65.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 64.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 64.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 64.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 64.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 64.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 64.3
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 64.3
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 64.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 64.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 64.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 63.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 63.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 63.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 63.6
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 63.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 63.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 63.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 63.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 63.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 62.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 62.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 62.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 62.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 62.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 62.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 62.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 62.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 62.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 62.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 62.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 61.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 61.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 61.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 61.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 61.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 61.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 61.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 60.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 60.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 60.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 60.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 60.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 60.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 60.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 60.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 60.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 59.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 59.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 59.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 59.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 59.7
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 59.3
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 59.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 58.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 58.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 58.8
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 58.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 58.8
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 58.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 58.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.2
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 57.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 57.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 57.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 57.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 57.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 57.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 57.0
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 56.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 56.5
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 56.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 56.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 56.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 56.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 55.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 54.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 54.8
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 54.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 54.6
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 54.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 54.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 53.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 53.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 53.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 53.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 52.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 52.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 52.7
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 52.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 52.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 52.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 52.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 52.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 52.0
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 51.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 51.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 51.7
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 51.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 51.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 51.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 51.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 51.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 50.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 50.8
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 50.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 50.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 49.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 49.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 49.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 49.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 49.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 48.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 48.3
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 48.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 48.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 47.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 47.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 47.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 47.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 46.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 46.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 46.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 46.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 45.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 44.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 44.2
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 43.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 43.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 43.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 43.5
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 43.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 42.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 42.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 42.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 41.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 41.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 40.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 40.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 39.9
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 38.9
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 36.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

119.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 119.8
FF:10164-103B2 76 years, female 119.8

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

70.6
Pig sample Sample description nTPM
Caudate
nTPM: 70.6
Samples: 4

Max nTPM: 83.6
Min nTPM: 61.6
Sample A Female 61.6
Sample B Female 73.0
Sample C Male 83.6
Sample D Male 64.3

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