PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:39.2 nTPM
FANTOM5:32.7 Scaled Tags Per Million
Pig:18.5 nTPM
Mouse:22.4 nTPM
Allen mouse:8.1 Expression energy

PONS AND MEDULLA - Annotated protein expression
Pending normal tissue analysis

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 39.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 24.6
2301 Female, age 85, both hemispheres 26.3
2090 Male, age 80, both hemispheres 25.6
2188 Female, age 91, both hemispheres 23.5
1984 Male, age 76, both hemispheres 22.8
Area postrema
nTPM: 21.8
2054 Male, age 76, both hemispheres 29.3
2306 Male, age 80, both hemispheres 22.1
2799 Male, age 61, both hemispheres 13.9
Dorsal cochlear nucleus
nTPM: 33.7
2370 Male, age 61, both hemispheres 36.6
2058 Male, age 76, both hemispheres 35.9
2802 Male, age 74, right hemisphere 35.0
2378 Male, age 80, both hemispheres 34.5
2187 Female, age 91, both hemispheres 26.6
Dorsal medullary reticular nucleus
nTPM: 39.2
2040 Female, age 85, both hemispheres 40.8
2373 Male, age 61, both hemispheres 40.7
2088 Male, age 76, both hemispheres 36.1
Dorsal motor vagal complex
nTPM: 32.2
2797 Male, age 61, both hemispheres 39.9
2844 Male, age 55, unknown 38.6
2000 Male, age 74, unknown 37.6
2185 Male, age 76, both hemispheres 32.4
2813 Female, age 72, unknown 29.8
2807 Female, age 85, both hemispheres 27.3
2133 Female, age 91, both hemispheres 26.9
2643 Male, age 74, both hemispheres 25.3
Dorsal tegmental nucleus
nTPM: 31.7
2083 Male, age 80, both hemispheres 39.4
1936 Male, age 76, left hemisphere 32.8
2326 Male, age 74, both hemispheres 29.2
2358 Male, age 61, both hemispheres 25.4
Dorsolateral tegmental area
nTPM: 31.3
2141 Male, age 76, both hemispheres 39.1
2654 Male, age 80, both hemispheres 36.6
2751 Female, age 85, both hemispheres 36.3
2360 Male, age 74, both hemispheres 24.2
2337 Male, age 61, both hemispheres 20.3
Gigantocellular reticular nuclei, medullary
nTPM: 32.7
2022 Male, age 76, right hemisphere 47.4
1876 Female, age 85, both hemispheres 39.3
2387 Female, age 91, both hemispheres 31.3
2310 Male, age 80, both hemispheres 27.4
2462 Male, age 74, both hemispheres 25.5
2314 Male, age 61, both hemispheres 25.1
Gigantocellular reticular nuclei, pars
nTPM: 33.0
2084 Female, age 85, both hemispheres 46.4
2336 Male, age 61, both hemispheres 39.1
2168 Male, age 76, both hemispheres 29.1
2706 Male, age 80, both hemispheres 25.7
2330 Male, age 80, both hemispheres 24.8
Inferior olive
nTPM: 29.7
2563 Male, age 74, both hemispheres 35.2
2085 Female, age 85, both hemispheres 29.8
2628 Female, age 91, both hemispheres 29.2
2379 Male, age 80, both hemispheres 28.4
2178 Male, age 61, both hemispheres 26.0
Kolliker-Fuse nucleus
nTPM: 27.4
2163 Male, age 80, both hemispheres 34.4
2793 Female, age 91, left hemisphere 28.3
2315 Male, age 76, right hemisphere 19.6
Lateral lemniscal nuclei
nTPM: 25.6
2169 Male, age 76, both hemispheres 29.0
2320 Female, age 91, left hemisphere 26.5
2453 Male, age 74, right hemisphere 25.0
2746 Female, age 85, left hemisphere 23.8
2036 Male, age 80, both hemispheres 23.7
Lateral medullary reticular nucleus
nTPM: 26.2
2804 Female, age 91, both hemispheres 29.1
2374 Male, age 61, both hemispheres 28.0
2044 Male, age 76, both hemispheres 27.9
2852 Male, age 80, both hemispheres 27.8
2190 Female, age 85, both hemispheres 26.4
2305 Male, age 74, both hemispheres 18.3
Lateral parabrachial nucleus
nTPM: 27.8
2139 Female, age 85, right hemisphere 30.8
2790 Male, age 61, both hemispheres 29.8
2013 Male, age 80, both hemispheres 27.5
2792 Male, age 76, both hemispheres 23.0
Lateral vestibular nucleus
nTPM: 34.4
2184 Male, age 76, both hemispheres 37.2
2311 Male, age 80, both hemispheres 31.6
Locus coeruleus
nTPM: 34.0
2162 Male, age 80, both hemispheres 40.5
1980 Male, age 76, both hemispheres 37.5
2014 Male, age 55, unknown 33.3
2317 Female, age 72, unknown 33.2
2788 Male, age 74, unknown 32.2
2123 Female, age 91, both hemispheres 31.2
2720 Male, age 74, both hemispheres 30.3
Medial olivary nucleus
nTPM: 19.0
2851 Male, age 80, both hemispheres 25.5
2138 Female, age 91, both hemispheres 24.5
1943 Male, age 61, both hemispheres 15.3
1962 Male, age 76, both hemispheres 10.5
Medial parabrachial nucleus
nTPM: 31.7
2786 Male, age 76, both hemispheres 41.2
2463 Female, age 85, right hemisphere 36.1
2156 Male, age 61, both hemispheres 30.2
2854 Male, age 80, both hemispheres 25.7
2170 Female, age 91, both hemispheres 25.6
Medial periolivary nuclei
nTPM: 23.2
2063 Male, age 76, both hemispheres 25.1
2458 Female, age 91, both hemispheres 23.9
2791 Male, age 74, right hemisphere 23.5
2171 Female, age 85, both hemispheres 22.0
2081 Male, age 80, both hemispheres 21.4
Medial vestibular nucleus
nTPM: 30.1
2093 Male, age 80, both hemispheres 36.4
2803 Female, age 91, both hemispheres 35.9
2801 Male, age 74, both hemispheres 27.9
2624 Male, age 61, both hemispheres 27.2
2134 Male, age 76, both hemispheres 26.9
2743 Female, age 85, both hemispheres 26.1
Motor facial nucleus
nTPM: 27.6
2795 Female, age 91, both hemispheres 32.9
2126 Male, age 61, both hemispheres 31.2
2062 Male, age 76, both hemispheres 29.2
2327 Male, age 80, both hemispheres 24.8
2365 Male, age 74, right hemisphere 24.6
2697 Female, age 85, both hemispheres 23.0
Motor hypoglossal nucleus
nTPM: 30.8
2132 Female, age 85, both hemispheres 33.7
2461 Male, age 61, both hemispheres 32.8
2125 Female, age 91, both hemispheres 32.1
2277 Male, age 76, both hemispheres 29.0
2182 Male, age 80, both hemispheres 26.4
Motor trigeminal nucleus
nTPM: 31.1
2309 Male, age 76, both hemispheres 41.8
2335 Male, age 61, both hemispheres 35.8
2560 Male, age 74, both hemispheres 29.3
2321 Female, age 91, both hemispheres 27.1
2079 Male, age 80, both hemispheres 21.5
Nuclei of the trapezoid body
nTPM: 26.0
2368 Female, age 91, both hemispheres 29.1
2159 Male, age 61, both hemispheres 28.4
1983 Male, age 76, both hemispheres 25.8
2166 Male, age 80, both hemispheres 23.4
2735 Female, age 85, both hemispheres 23.3
Nucleus ambiguus
nTPM: 34.8
2096 Female, age 85, both hemispheres 48.8
2071 Male, age 76, both hemispheres 20.9
Nucleus cuneatus
nTPM: 33.4
2562 Male, age 61, both hemispheres 44.3
2805 Female, age 91, both hemispheres 39.3
2100 Male, age 76, both hemispheres 35.5
2131 Male, age 76, both hemispheres 33.9
2381 Male, age 80, both hemispheres 33.4
2564 Male, age 74, both hemispheres 31.5
2376 Male, age 61, both hemispheres 30.6
2380 Male, age 80, both hemispheres 27.2
2808 Female, age 85, both hemispheres 25.3
Nucleus gracilis
nTPM: 25.9
2382 Male, age 80, both hemispheres 26.8
2627 Male, age 74, both hemispheres 25.9
2299 Female, age 85, both hemispheres 25.1
Nucleus raphe magnus
nTPM: 25.7
2160 Male, age 61, both hemispheres 28.2
2328 Male, age 80, both hemispheres 26.8
2459 Female, age 91, both hemispheres 26.8
2051 Male, age 76, both hemispheres 25.3
2455 Male, age 74, both hemispheres 24.8
2172 Female, age 85, both hemispheres 22.3
Nucleus raphe obscurus
nTPM: 20.3
2800 Male, age 61, midline 24.2
2845 Female, age 85, midline 21.3
2142 Male, age 76, midline 15.5
Nucleus raphe pallidus
nTPM: 18.3
2183 Male, age 80, midline 27.1
2145 Male, age 76, midline 16.5
1924 Male, age 61, midline 11.2
Nucleus tractus solitarii
nTPM: 31.5
2656 Male, age 76, both hemispheres 53.5
2307 Male, age 80, both hemispheres 30.1
2191 Female, age 85, both hemispheres 25.8
2144 Female, age 91, right hemisphere 16.6
Paramedian reticular nucleus
nTPM: 32.3
2313 Male, age 61, both hemispheres 43.8
2057 Male, age 80, both hemispheres 35.6
2050 Female, age 85, both hemispheres 30.6
2052 Male, age 76, both hemispheres 19.2
Parvicellular reticular nuclei
nTPM: 28.4
2119 Male, age 80, both hemispheres 31.6
2558 Male, age 74, both hemispheres 26.9
2095 Male, age 76, both hemispheres 26.7
Parvicellular reticular nuclei, medullary
nTPM: 38.4
2181 Male, age 80, left hemisphere 45.9
2189 Female, age 91, both hemispheres 35.8
2091 Female, age 85, both hemispheres 33.4
Pedunculopontine tegmental nucleus
nTPM: 36.1
1921 Female, age 85, both hemispheres 48.2
2334 Male, age 80, both hemispheres 34.6
2338 Male, age 61, both hemispheres 25.5
Peritrigeminal nucleus
nTPM: 23.2
2067 Female, age 85, both hemispheres 25.9
2179 Male, age 61, both hemispheres 23.7
2136 Male, age 76, both hemispheres 20.1
Pontine nuclei
nTPM: 24.6
1968 Male, age 76, left hemisphere 29.5
2787 Female, age 85, both hemispheres 25.8
1863 Male, age 55, unknown 25.5
2115 Male, age 80, left hemisphere 24.9
2109 Female, age 72, unknown 23.7
2319 Female, age 91, both hemispheres 22.9
2454 Male, age 74, left hemisphere 22.8
2727 Male, age 61, right hemisphere 21.6
Pontine raphe nucleus
nTPM: 34.4
2853 Male, age 76, midline 41.6
2122 Female, age 85, midline 27.3
Posteroventral cochlear nucleus
nTPM: 30.6
2752 Female, age 85, both hemispheres 37.6
2070 Male, age 76, both hemispheres 34.8
2371 Male, age 61, both hemispheres 34.5
2135 Female, age 91, both hemispheres 23.1
2341 Male, age 80, both hemispheres 22.8
Prepositus hypoglossal nucleus
nTPM: 28.0
2086 Male, age 80, both hemispheres 29.0
2855 Female, age 85, right hemisphere 26.9
Principal sensory trigeminal nucleus
nTPM: 27.2
2324 Male, age 76, both hemispheres 34.5
2158 Male, age 61, both hemispheres 27.0
2367 Female, age 91, left hemisphere 24.2
2008 Male, age 80, left hemisphere 23.1
Reticular pontine nucleus, caudal
nTPM: 27.0
2559 Male, age 74, both hemispheres 31.6
2457 Female, age 91, both hemispheres 27.9
2332 Male, age 80, right hemisphere 24.6
2092 Male, age 76, both hemispheres 24.0
Reticular pontine nucleus, oral
nTPM: 31.4
2167 Male, age 76, both hemispheres 40.9
1939 Male, age 80, both hemispheres 37.5
2012 Female, age 85, both hemispheres 31.3
2366 Female, age 91, both hemispheres 26.4
2361 Male, age 74, both hemispheres 21.0
Reticulotegmental nucleus
nTPM: 32.6
2333 Male, age 80, both hemispheres 33.3
2322 Female, age 91, both hemispheres 33.2
2325 Male, age 76, both hemispheres 32.2
2452 Male, age 74, both hemispheres 31.5
Spinal trigeminal nucleus, caudal
nTPM: 34.2
2390 Female, age 91, both hemispheres 36.5
2308 Male, age 80, both hemispheres 35.3
2447 Male, age 76, both hemispheres 34.2
2312 Male, age 61, both hemispheres 32.4
2642 Male, age 74, both hemispheres 32.4
Spinal trigeminal nucleus, interpolar
nTPM: 33.4
2625 Male, age 61, both hemispheres 39.9
2033 Male, age 80, both hemispheres 35.2
2386 Female, age 85, both hemispheres 35.1
2389 Female, age 91, both hemispheres 32.8
2066 Male, age 76, right hemisphere 24.0
Spinal trigeminal nucleus, oral
nTPM: 34.6
1978 Male, age 76, both hemispheres 39.1
2737 Female, age 85, both hemispheres 35.1
2164 Male, age 80, both hemispheres 29.5
Spinal vestibular nucleus
nTPM: 37.7
2186 Female, age 91, both hemispheres 40.2
2780 Male, age 80, both hemispheres 38.9
2796 Male, age 61, both hemispheres 38.4
2806 Female, age 85, both hemispheres 37.5
2748 Male, age 76, both hemispheres 36.1
2384 Male, age 74, both hemispheres 34.9
Subcoeruleus area
nTPM: 34.2
2323 Female, age 91, left hemisphere 36.7
2369 Female, age 85, left hemisphere 35.2
2451 Male, age 74, both hemispheres 34.6
1958 Male, age 80, both hemispheres 32.9
2089 Male, age 76, left hemisphere 31.7
Superior olive
nTPM: 25.8
2020 Male, age 76, both hemispheres 28.7
2561 Female, age 91, both hemispheres 27.3
2329 Male, age 80, right hemisphere 26.5
1875 Female, age 85, both hemispheres 24.3
2364 Male, age 74, right hemisphere 22.3
Superior vestibular nucleus
nTPM: 28.8
2015 Male, age 80, both hemispheres 32.2
2061 Male, age 76, both hemispheres 30.1
2383 Male, age 74, both hemispheres 24.1
Ventral medullary reticular nucleus
nTPM: 35.4
2060 Male, age 76, both hemispheres 41.9
2372 Male, age 61, both hemispheres 28.8
Ventral periolivary nuclei
nTPM: 24.6
2794 Female, age 91, left hemisphere 28.0
2165 Male, age 80, both hemispheres 25.7
2130 Female, age 85, both hemispheres 24.0
2023 Male, age 76, both hemispheres 20.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 24.9
2741 Female, age 85, both hemispheres 26.9
2180 Male, age 61, both hemispheres 26.3
2302 Female, age 91, both hemispheres 24.8
2118 Male, age 80, both hemispheres 24.4
1986 Male, age 76, both hemispheres 22.4
Ventrolateral tegmental area, A5 NE cell group
nTPM: 27.1
2456 Female, age 91, both hemispheres 30.7
2359 Male, age 61, both hemispheres 28.7
1959 Male, age 76, both hemispheres 26.8
2449 Male, age 74, both hemispheres 26.0
2161 Male, age 80, both hemispheres 25.7
2840 Female, age 85, both hemispheres 24.4

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 32.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 32.7
FF:10182-103D2 60 years, female 40.9
FF:10165-103B3 76 years, female 24.5
Medulla oblongata
Scaled Tags Per Million: 24.9
FF:10038-101F2 18-64 years, mixed 36.3
FF:10155-103A2 76 years, female 21.1
FF:10174-103C3 60 years, female 17.2
Pons
Scaled Tags Per Million: 31.8
FF:10033-101E6 18-54 years, mixed 31.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 18.5
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 16.1
Samples: 4

Max nTPM: 21.6
Min nTPM: 9.0
Sample A Female 21.6
Sample B Female 16.1
Sample C Male 17.5
Sample D Male 9.0
Pons
nTPM: 18.5
Samples: 4

Max nTPM: 22.0
Min nTPM: 13.7
Sample A Female 17.3
Sample B Female 21.0
Sample C Male 22.0
Sample D Male 13.7

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 22.4
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 22.4
Samples: 4

Max nTPM: 22.4
Min nTPM: 22.3
Sample A Male 22.3
Sample B Male 22.3
Sample C Female 22.4
Sample D Female 22.4

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 8.1
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 8.1
71654154 Antisense, RP_050927_03_D10, Mouse strain C57BL/6J (56 days, male) 8.1
Pons
Expression energy: 6.3
71654154 Antisense, RP_050927_03_D10, Mouse strain C57BL/6J (56 days, male) 6.3

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