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ALDH2
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  • ALDH2
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Low
Neuronal cells: Not detected
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:150.3 nTPM
FANTOM5:377.2 Scaled Tags Per Million
Pig:20.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA051065
Glial cells Low
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

150.3
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 150.3
Samples: 246

Max nTPM: 356.3
Min nTPM: 34.2
Std nTPM: 53.1
Median nTPM: 141.8
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 356.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 331.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 320.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 314.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 308.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 267.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 264.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 260.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 259.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 256.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 246.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 243.3
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 241.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 240.9
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 240.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 237.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 236.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 233.5
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 232.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 231.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 225.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 224.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 224.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 222.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 218.9
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 214.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 214.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 211.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 208.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 208.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 207.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 205.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 204.4
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 204.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 203.6
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 203.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 203.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 202.2
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 202.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 201.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 197.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 197.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 197.7
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 197.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 195.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 195.7
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 194.9
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 194.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 194.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 193.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 192.4
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 192.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 191.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 188.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 188.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 187.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 184.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 183.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 183.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 182.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 182.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 181.4
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 181.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 178.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 177.4
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 176.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 176.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 175.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 175.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 174.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 173.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 173.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 172.2
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 169.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 168.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 168.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 166.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 165.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 164.7
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 164.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 162.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 161.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 160.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 160.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 160.2
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 159.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 159.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 158.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 157.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 157.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 157.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 157.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 156.9
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 156.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 156.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 156.1
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 155.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 155.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 155.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 154.7
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 154.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 154.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 153.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 153.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 153.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 153.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 151.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 150.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 150.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 149.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 148.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 147.9
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 147.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 146.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 145.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 145.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 145.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 144.7
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 143.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 143.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 143.5
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 143.2
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 141.8
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 141.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 140.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 139.9
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 139.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 139.5
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 139.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 139.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 139.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 139.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 138.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 137.4
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 137.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 135.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 135.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 135.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 134.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 134.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 134.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 133.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 133.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 133.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 133.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 132.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 132.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 132.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 132.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 132.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 132.3
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 131.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 131.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 130.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 130.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 129.2
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 129.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 129.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 128.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 128.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 128.5
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 128.3
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 128.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 127.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 127.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 127.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 127.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 126.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 125.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 125.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 125.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 124.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 123.5
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 123.3
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 123.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 122.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 120.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 119.7
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 118.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 118.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 116.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 116.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 116.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 116.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 116.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 116.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 115.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 114.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 114.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 114.4
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 114.2
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 113.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 113.5
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 112.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 112.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 111.5
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 110.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 109.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 109.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 108.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 107.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 107.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 105.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 105.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 105.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 103.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 103.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 103.3
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 102.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 102.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 102.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 101.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 100.6
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 99.6
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 98.6
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 95.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 94.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 93.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 90.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 90.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 89.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 89.2
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 88.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 87.3
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 83.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 83.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 79.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 79.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 78.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 78.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 78.3
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 78.0
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 77.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 73.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 69.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 69.3
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 66.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 65.4
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 56.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 54.5
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 53.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 51.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 47.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 46.6
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 40.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 34.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

377.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 377.2
FF:10164-103B2 76 years, female 377.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

20.9
Pig sample Sample description nTPM
Caudate
nTPM: 20.9
Samples: 4

Max nTPM: 21.9
Min nTPM: 19.8
Sample A Female 21.9
Sample B Female 20.3
Sample C Male 19.8
Sample D Male 21.7

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