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MRPL51
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:122.2 nTPM
FANTOM5:81.0 Scaled Tags Per Million
Pig:29.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039923
Glial cells Not detected
Neuronal cells Low


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

122.2
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 122.2
Samples: 246

Max nTPM: 294.2
Min nTPM: 76.2
Std nTPM: 31.4
Median nTPM: 115.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 294.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 257.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 230.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 227.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 227.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 224.3
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 213.5
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 192.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 189.5
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 186.9
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 180.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 179.8
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 179.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 176.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 173.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 173.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 170.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 166.1
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 165.9
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 164.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 164.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 164.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 164.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 163.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 160.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 160.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 160.1
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 159.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 159.4
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 157.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 156.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 156.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 155.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 155.1
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 154.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 152.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 151.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 147.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 147.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 146.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 146.6
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 144.9
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 142.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 142.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 142.5
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 142.4
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 142.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 141.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 141.8
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 141.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 140.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 140.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 140.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 139.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 139.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 138.9
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 138.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 138.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 137.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 136.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 134.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 133.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 133.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 133.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 132.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 132.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 131.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 130.5
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 130.5
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 129.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 129.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 129.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 128.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 128.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 128.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 127.9
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 127.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 127.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 127.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 126.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 126.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 126.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 126.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 126.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 125.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 125.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 125.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 124.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 124.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 123.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 123.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 123.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 123.6
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 123.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 123.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 122.5
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 121.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 120.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 120.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 120.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 119.6
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 119.2
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 119.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 118.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 118.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 118.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 117.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 117.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 117.9
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 117.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 117.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 116.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 116.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 116.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 116.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 116.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 116.2
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 116.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 115.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 115.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 115.3
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 115.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 115.0
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 114.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 114.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 114.3
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 114.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 113.7
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 113.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 113.3
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 113.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 113.0
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 112.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 112.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 112.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 111.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 111.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 111.6
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 111.2
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 110.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 110.5
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 110.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 110.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 110.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 110.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 110.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 109.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 109.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 108.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 108.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 108.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 108.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 108.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 108.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 108.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 108.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 108.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 107.7
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 107.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 107.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 107.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 107.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 107.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 106.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 106.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 105.8
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 105.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 105.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 104.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 104.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 104.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 104.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 104.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 103.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 103.6
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 103.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 103.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 103.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 102.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 102.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 102.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 101.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 101.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 101.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 101.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 101.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 101.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 101.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 100.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 100.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 100.4
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 99.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 99.2
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 99.0
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 98.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 98.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 97.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 97.5
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 97.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 97.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 97.1
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 97.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 96.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 95.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 95.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 95.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 95.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 94.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 94.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 94.5
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 94.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 94.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 94.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 93.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 93.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 92.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 92.4
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 92.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 92.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 92.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 90.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 90.6
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 90.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 90.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 89.7
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 89.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 88.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 88.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.3
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 87.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 86.7
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 86.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 85.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 84.6
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 84.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 84.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 83.5
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 83.5
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 82.8
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 82.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 81.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 79.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 78.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 76.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

81.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 81.0
FF:10164-103B2 76 years, female 81.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

29.8
Pig sample Sample description nTPM
Caudate
nTPM: 29.8
Samples: 4

Max nTPM: 35.9
Min nTPM: 26.7
Sample A Female 29.7
Sample B Female 27.0
Sample C Male 35.9
Sample D Male 26.7

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