PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Medulla oblongatai 		14.542
Mouse brain, Intensity
Ponsi 		41.729
RNA expressioni
HPA Brain:56.1 nTPM
FANTOM5:120.8 Scaled Tags Per Million
Pig:60.4 nTPM
Mouse:49.7 nTPM
Allen mouse:5.4 Expression energy

MEDULLA OBLONGATA - Mouse brain profilei , antibody HPA022134
Medulla oblongata mean intensity 14.542
intensityi
FRONT BACK
Nucleus of the solitary tract 6.364
Raphe magnus nucleus 2.936
Cochlear nucleus 1.693
Lateral paragigantocellular nucleus 5.068
Raphe pallidus nucleus 1.476
Facial nucleus 4.655
Hypoglossal nucleus 3.422
Ambiguus nucleus 14.542
External cuneate nucleus 3.978
Inferior olivary nucleus 11.331
Raphe obscures nucleus 3.457
Dorsal motor nucleus of vagus 8.817
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 5.218
Parabrachial nucleus 2.883
Principle sensory trigeminal nucleus 6.292
Locus coeruleus 41.729
Pontine nucleus 2.712
Vestibular nucleus 2.929
Pontine reticular nucleus, oral 3.210
Lateral lemniscus 4.354
Superior paraolivary nucleus 5.361

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 56.1
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 46.3
2188 Female, age 91, both hemispheres 50.3
2301 Female, age 85, both hemispheres 49.8
2090 Male, age 80, both hemispheres 42.8
1984 Male, age 76, both hemispheres 42.4
Area postrema
nTPM: 35.9
2054 Male, age 76, both hemispheres 42.6
2306 Male, age 80, both hemispheres 33.0
2799 Male, age 61, both hemispheres 32.1
Dorsal cochlear nucleus
nTPM: 39.5
2187 Female, age 91, both hemispheres 43.0
2802 Male, age 74, right hemisphere 40.3
2370 Male, age 61, both hemispheres 40.2
2058 Male, age 76, both hemispheres 37.7
2378 Male, age 80, both hemispheres 36.6
Dorsal medullary reticular nucleus
nTPM: 43.7
2040 Female, age 85, both hemispheres 55.7
2088 Male, age 76, both hemispheres 38.1
2373 Male, age 61, both hemispheres 37.5
Dorsal motor vagal complex
nTPM: 40.6
2813 Female, age 72, unknown 46.8
2000 Male, age 74, unknown 46.7
2133 Female, age 91, both hemispheres 44.0
2844 Male, age 55, unknown 43.4
2807 Female, age 85, both hemispheres 37.6
2185 Male, age 76, both hemispheres 37.0
2643 Male, age 74, both hemispheres 36.1
2797 Male, age 61, both hemispheres 33.3
Dorsal tegmental nucleus
nTPM: 44.5
2083 Male, age 80, both hemispheres 48.8
2326 Male, age 74, both hemispheres 43.8
1936 Male, age 76, left hemisphere 43.0
2358 Male, age 61, both hemispheres 42.4
Dorsolateral tegmental area
nTPM: 44.4
2751 Female, age 85, both hemispheres 49.9
2654 Male, age 80, both hemispheres 49.5
2141 Male, age 76, both hemispheres 45.0
2360 Male, age 74, both hemispheres 40.9
2337 Male, age 61, both hemispheres 36.7
Gigantocellular reticular nuclei, medullary
nTPM: 43.6
2387 Female, age 91, both hemispheres 49.3
2462 Male, age 74, both hemispheres 46.1
2022 Male, age 76, right hemisphere 43.7
1876 Female, age 85, both hemispheres 43.2
2310 Male, age 80, both hemispheres 40.4
2314 Male, age 61, both hemispheres 39.0
Gigantocellular reticular nuclei, pars
nTPM: 44.2
2168 Male, age 76, both hemispheres 59.7
2084 Female, age 85, both hemispheres 44.3
2336 Male, age 61, both hemispheres 41.0
2706 Male, age 80, both hemispheres 38.6
2330 Male, age 80, both hemispheres 37.6
Inferior olive
nTPM: 42.2
2628 Female, age 91, both hemispheres 46.8
2563 Male, age 74, both hemispheres 44.9
2085 Female, age 85, both hemispheres 41.7
2379 Male, age 80, both hemispheres 39.5
2178 Male, age 61, both hemispheres 37.8
Kolliker-Fuse nucleus
nTPM: 47.2
2793 Female, age 91, left hemisphere 47.9
2163 Male, age 80, both hemispheres 47.0
2315 Male, age 76, right hemisphere 46.7
Lateral lemniscal nuclei
nTPM: 54.2
2036 Male, age 80, both hemispheres 64.8
2169 Male, age 76, both hemispheres 60.5
2746 Female, age 85, left hemisphere 51.1
2453 Male, age 74, right hemisphere 48.5
2320 Female, age 91, left hemisphere 46.2
Lateral medullary reticular nucleus
nTPM: 45.7
2044 Male, age 76, both hemispheres 54.4
2305 Male, age 74, both hemispheres 49.0
2804 Female, age 91, both hemispheres 46.1
2374 Male, age 61, both hemispheres 44.9
2190 Female, age 85, both hemispheres 42.2
2852 Male, age 80, both hemispheres 37.3
Lateral parabrachial nucleus
nTPM: 46.5
2139 Female, age 85, right hemisphere 55.8
2013 Male, age 80, both hemispheres 45.7
2790 Male, age 61, both hemispheres 42.7
2792 Male, age 76, both hemispheres 41.9
Lateral vestibular nucleus
nTPM: 41.7
2184 Male, age 76, both hemispheres 42.9
2311 Male, age 80, both hemispheres 40.5
Locus coeruleus
nTPM: 56.1
2014 Male, age 55, unknown 69.9
2720 Male, age 74, both hemispheres 59.3
2788 Male, age 74, unknown 56.8
2123 Female, age 91, both hemispheres 55.7
1980 Male, age 76, both hemispheres 52.2
2162 Male, age 80, both hemispheres 49.4
2317 Female, age 72, unknown 49.4
Medial olivary nucleus
nTPM: 41.4
2138 Female, age 91, both hemispheres 45.2
1962 Male, age 76, both hemispheres 41.2
2851 Male, age 80, both hemispheres 40.4
1943 Male, age 61, both hemispheres 38.9
Medial parabrachial nucleus
nTPM: 47.6
2170 Female, age 91, both hemispheres 56.5
2854 Male, age 80, both hemispheres 54.3
2463 Female, age 85, right hemisphere 44.9
2786 Male, age 76, both hemispheres 42.5
2156 Male, age 61, both hemispheres 39.8
Medial periolivary nuclei
nTPM: 52.4
2063 Male, age 76, both hemispheres 64.6
2171 Female, age 85, both hemispheres 62.8
2791 Male, age 74, right hemisphere 47.4
2458 Female, age 91, both hemispheres 44.3
2081 Male, age 80, both hemispheres 43.1
Medial vestibular nucleus
nTPM: 47.1
2624 Male, age 61, both hemispheres 50.4
2801 Male, age 74, both hemispheres 50.3
2803 Female, age 91, both hemispheres 48.9
2743 Female, age 85, both hemispheres 46.6
2134 Male, age 76, both hemispheres 45.8
2093 Male, age 80, both hemispheres 40.7
Motor facial nucleus
nTPM: 50.7
2062 Male, age 76, both hemispheres 62.9
2697 Female, age 85, both hemispheres 55.6
2365 Male, age 74, right hemisphere 53.5
2327 Male, age 80, both hemispheres 47.8
2795 Female, age 91, both hemispheres 46.9
2126 Male, age 61, both hemispheres 37.8
Motor hypoglossal nucleus
nTPM: 49.1
2461 Male, age 61, both hemispheres 58.5
2125 Female, age 91, both hemispheres 50.8
2182 Male, age 80, both hemispheres 48.5
2132 Female, age 85, both hemispheres 47.1
2277 Male, age 76, both hemispheres 40.7
Motor trigeminal nucleus
nTPM: 42.3
2079 Male, age 80, both hemispheres 46.4
2321 Female, age 91, both hemispheres 44.8
2560 Male, age 74, both hemispheres 44.2
2309 Male, age 76, both hemispheres 39.5
2335 Male, age 61, both hemispheres 36.8
Nuclei of the trapezoid body
nTPM: 54.2
2735 Female, age 85, both hemispheres 62.5
2159 Male, age 61, both hemispheres 60.0
1983 Male, age 76, both hemispheres 58.9
2166 Male, age 80, both hemispheres 47.5
2368 Female, age 91, both hemispheres 42.2
Nucleus ambiguus
nTPM: 39.2
2071 Male, age 76, both hemispheres 47.9
2096 Female, age 85, both hemispheres 30.5
Nucleus cuneatus
nTPM: 37.5
2381 Male, age 80, both hemispheres 41.7
2376 Male, age 61, both hemispheres 40.9
2805 Female, age 91, both hemispheres 40.7
2564 Male, age 74, both hemispheres 40.0
2562 Male, age 61, both hemispheres 37.4
2808 Female, age 85, both hemispheres 35.6
2131 Male, age 76, both hemispheres 35.5
2100 Male, age 76, both hemispheres 32.7
2380 Male, age 80, both hemispheres 32.6
Nucleus gracilis
nTPM: 38.7
2627 Male, age 74, both hemispheres 46.5
2382 Male, age 80, both hemispheres 40.5
2299 Female, age 85, both hemispheres 29.3
Nucleus raphe magnus
nTPM: 54.1
2160 Male, age 61, both hemispheres 67.0
2172 Female, age 85, both hemispheres 65.7
2051 Male, age 76, both hemispheres 55.4
2455 Male, age 74, both hemispheres 48.0
2459 Female, age 91, both hemispheres 44.8
2328 Male, age 80, both hemispheres 43.9
Nucleus raphe obscurus
nTPM: 45.9
2845 Female, age 85, midline 51.7
2800 Male, age 61, midline 43.6
2142 Male, age 76, midline 42.4
Nucleus raphe pallidus
nTPM: 47.5
2145 Male, age 76, midline 50.6
2183 Male, age 80, midline 50.4
1924 Male, age 61, midline 41.7
Nucleus tractus solitarii
nTPM: 40.7
2144 Female, age 91, right hemisphere 47.9
2656 Male, age 76, both hemispheres 47.0
2191 Female, age 85, both hemispheres 35.9
2307 Male, age 80, both hemispheres 32.1
Paramedian reticular nucleus
nTPM: 48.2
2050 Female, age 85, both hemispheres 58.6
2313 Male, age 61, both hemispheres 49.9
2052 Male, age 76, both hemispheres 43.4
2057 Male, age 80, both hemispheres 40.9
Parvicellular reticular nuclei
nTPM: 44.5
2558 Male, age 74, both hemispheres 48.1
2095 Male, age 76, both hemispheres 45.2
2119 Male, age 80, both hemispheres 40.2
Parvicellular reticular nuclei, medullary
nTPM: 45.5
2189 Female, age 91, both hemispheres 48.8
2181 Male, age 80, left hemisphere 44.4
2091 Female, age 85, both hemispheres 43.3
Pedunculopontine tegmental nucleus
nTPM: 46.2
2334 Male, age 80, both hemispheres 48.2
2338 Male, age 61, both hemispheres 46.0
1921 Female, age 85, both hemispheres 44.6
Peritrigeminal nucleus
nTPM: 46.1
2136 Male, age 76, both hemispheres 48.1
2067 Female, age 85, both hemispheres 45.3
2179 Male, age 61, both hemispheres 45.0
Pontine nuclei
nTPM: 55.4
1863 Male, age 55, unknown 69.1
2787 Female, age 85, both hemispheres 65.1
2727 Male, age 61, right hemisphere 60.8
2454 Male, age 74, left hemisphere 54.4
2109 Female, age 72, unknown 54.2
1968 Male, age 76, left hemisphere 52.2
2319 Female, age 91, both hemispheres 48.0
2115 Male, age 80, left hemisphere 39.6
Pontine raphe nucleus
nTPM: 54.5
2122 Female, age 85, midline 58.0
2853 Male, age 76, midline 51.1
Posteroventral cochlear nucleus
nTPM: 43.5
2752 Female, age 85, both hemispheres 48.3
2135 Female, age 91, both hemispheres 46.3
2341 Male, age 80, both hemispheres 43.1
2070 Male, age 76, both hemispheres 40.5
2371 Male, age 61, both hemispheres 39.5
Prepositus hypoglossal nucleus
nTPM: 46.9
2855 Female, age 85, right hemisphere 54.5
2086 Male, age 80, both hemispheres 39.3
Principal sensory trigeminal nucleus
nTPM: 49.8
2158 Male, age 61, both hemispheres 59.9
2008 Male, age 80, left hemisphere 48.7
2367 Female, age 91, left hemisphere 48.5
2324 Male, age 76, both hemispheres 42.0
Reticular pontine nucleus, caudal
nTPM: 45.3
2092 Male, age 76, both hemispheres 50.4
2332 Male, age 80, right hemisphere 45.8
2559 Male, age 74, both hemispheres 43.8
2457 Female, age 91, both hemispheres 41.0
Reticular pontine nucleus, oral
nTPM: 51.7
2361 Male, age 74, both hemispheres 60.3
2012 Female, age 85, both hemispheres 55.0
2366 Female, age 91, both hemispheres 48.7
2167 Male, age 76, both hemispheres 47.4
1939 Male, age 80, both hemispheres 47.1
Reticulotegmental nucleus
nTPM: 45.1
2325 Male, age 76, both hemispheres 51.7
2452 Male, age 74, both hemispheres 48.3
2322 Female, age 91, both hemispheres 43.5
2333 Male, age 80, both hemispheres 37.0
Spinal trigeminal nucleus, caudal
nTPM: 42.7
2390 Female, age 91, both hemispheres 53.8
2642 Male, age 74, both hemispheres 40.8
2447 Male, age 76, both hemispheres 40.2
2312 Male, age 61, both hemispheres 39.9
2308 Male, age 80, both hemispheres 38.8
Spinal trigeminal nucleus, interpolar
nTPM: 48.9
2625 Male, age 61, both hemispheres 52.5
2066 Male, age 76, right hemisphere 51.8
2386 Female, age 85, both hemispheres 47.2
2389 Female, age 91, both hemispheres 46.9
2033 Male, age 80, both hemispheres 46.2
Spinal trigeminal nucleus, oral
nTPM: 43.0
2737 Female, age 85, both hemispheres 45.8
1978 Male, age 76, both hemispheres 43.7
2164 Male, age 80, both hemispheres 39.7
Spinal vestibular nucleus
nTPM: 46.2
2186 Female, age 91, both hemispheres 52.3
2806 Female, age 85, both hemispheres 48.5
2384 Male, age 74, both hemispheres 46.6
2780 Male, age 80, both hemispheres 44.6
2748 Male, age 76, both hemispheres 44.5
2796 Male, age 61, both hemispheres 40.3
Subcoeruleus area
nTPM: 45.1
1958 Male, age 80, both hemispheres 50.0
2323 Female, age 91, left hemisphere 48.5
2089 Male, age 76, left hemisphere 46.0
2369 Female, age 85, left hemisphere 43.3
2451 Male, age 74, both hemispheres 37.5
Superior olive
nTPM: 54.3
1875 Female, age 85, both hemispheres 66.6
2020 Male, age 76, both hemispheres 56.2
2364 Male, age 74, right hemisphere 51.4
2329 Male, age 80, right hemisphere 49.1
2561 Female, age 91, both hemispheres 47.9
Superior vestibular nucleus
nTPM: 44.6
2015 Male, age 80, both hemispheres 46.8
2383 Male, age 74, both hemispheres 46.4
2061 Male, age 76, both hemispheres 40.5
Ventral medullary reticular nucleus
nTPM: 42.0
2372 Male, age 61, both hemispheres 43.2
2060 Male, age 76, both hemispheres 40.8
Ventral periolivary nuclei
nTPM: 55.5
2130 Female, age 85, both hemispheres 67.8
2023 Male, age 76, both hemispheres 58.7
2165 Male, age 80, both hemispheres 52.4
2794 Female, age 91, left hemisphere 43.2
Ventrolateral medulla, A1-C1 cell groups
nTPM: 43.3
1986 Male, age 76, both hemispheres 47.5
2741 Female, age 85, both hemispheres 45.0
2180 Male, age 61, both hemispheres 43.8
2302 Female, age 91, both hemispheres 41.5
2118 Male, age 80, both hemispheres 38.7
Ventrolateral tegmental area, A5 NE cell group
nTPM: 47.8
2840 Female, age 85, both hemispheres 56.2
1959 Male, age 76, both hemispheres 51.7
2449 Male, age 74, both hemispheres 50.7
2161 Male, age 80, both hemispheres 45.3
2359 Male, age 61, both hemispheres 41.9
2456 Female, age 91, both hemispheres 40.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 120.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 66.9
FF:10165-103B3 76 years, female 73.7
FF:10182-103D2 60 years, female 60.1
Medulla oblongata
Scaled Tags Per Million: 64.2
FF:10155-103A2 76 years, female 75.3
FF:10038-101F2 18-64 years, mixed 72.7
FF:10174-103C3 60 years, female 44.5
Pons
Scaled Tags Per Million: 120.8
FF:10033-101E6 18-54 years, mixed 120.8

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 60.4
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 53.3
Samples: 4

Max nTPM: 61.1
Min nTPM: 49.5
Sample A Female 61.1
Sample B Female 50.8
Sample C Male 49.5
Sample D Male 51.9
Pons
nTPM: 60.4
Samples: 4

Max nTPM: 63.9
Min nTPM: 57.5
Sample A Female 63.9
Sample B Female 57.5
Sample C Male 59.6
Sample D Male 60.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 49.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 49.7
Samples: 4

Max nTPM: 52.3
Min nTPM: 48.2
Sample A Male 52.3
Sample B Male 48.2
Sample C Female 49.7
Sample D Female 48.7

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 5.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.7
68845807 Antisense, RP_050224_02_E10, Mouse strain C57BL/6J (56 days, male) 3.7
Pons
Expression energy: 5.4
68845807 Antisense, RP_050224_02_E10, Mouse strain C57BL/6J (56 days, male) 5.4

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