PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:34.0 nTPM
FANTOM5:11.7 Scaled Tags Per Million
Pig:35.3 nTPM
Mouse:7.1 nTPM
Allen mouse:0.4 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 34.0
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 30.8
2090 Male, age 80, both hemispheres 32.4
1984 Male, age 76, both hemispheres 31.3
2188 Female, age 91, both hemispheres 30.8
2301 Female, age 85, both hemispheres 28.6
Area postrema
nTPM: 24.7
2054 Male, age 76, both hemispheres 29.0
2799 Male, age 61, both hemispheres 23.2
2306 Male, age 80, both hemispheres 22.0
Dorsal cochlear nucleus
nTPM: 27.3
2370 Male, age 61, both hemispheres 31.0
2378 Male, age 80, both hemispheres 30.0
2058 Male, age 76, both hemispheres 28.1
2187 Female, age 91, both hemispheres 26.7
2802 Male, age 74, right hemisphere 20.9
Dorsal medullary reticular nucleus
nTPM: 27.6
2088 Male, age 76, both hemispheres 31.4
2373 Male, age 61, both hemispheres 27.6
2040 Female, age 85, both hemispheres 23.7
Dorsal motor vagal complex
nTPM: 24.2
2807 Female, age 85, both hemispheres 36.4
2813 Female, age 72, unknown 27.0
2133 Female, age 91, both hemispheres 25.9
2000 Male, age 74, unknown 25.0
2643 Male, age 74, both hemispheres 23.3
2185 Male, age 76, both hemispheres 21.1
2844 Male, age 55, unknown 21.0
2797 Male, age 61, both hemispheres 14.0
Dorsal tegmental nucleus
nTPM: 28.3
2358 Male, age 61, both hemispheres 35.8
1936 Male, age 76, left hemisphere 28.2
2326 Male, age 74, both hemispheres 25.7
2083 Male, age 80, both hemispheres 23.4
Dorsolateral tegmental area
nTPM: 30.2
2337 Male, age 61, both hemispheres 38.2
2360 Male, age 74, both hemispheres 30.8
2141 Male, age 76, both hemispheres 29.3
2654 Male, age 80, both hemispheres 27.5
2751 Female, age 85, both hemispheres 25.4
Gigantocellular reticular nuclei, medullary
nTPM: 24.7
2462 Male, age 74, both hemispheres 27.7
2022 Male, age 76, right hemisphere 26.2
2310 Male, age 80, both hemispheres 25.8
1876 Female, age 85, both hemispheres 25.0
2387 Female, age 91, both hemispheres 23.0
2314 Male, age 61, both hemispheres 20.7
Gigantocellular reticular nuclei, pars
nTPM: 24.2
2084 Female, age 85, both hemispheres 27.4
2706 Male, age 80, both hemispheres 25.5
2336 Male, age 61, both hemispheres 25.1
2330 Male, age 80, both hemispheres 22.5
2168 Male, age 76, both hemispheres 20.4
Inferior olive
nTPM: 25.4
2379 Male, age 80, both hemispheres 32.0
2563 Male, age 74, both hemispheres 24.3
2085 Female, age 85, both hemispheres 24.0
2178 Male, age 61, both hemispheres 23.9
2628 Female, age 91, both hemispheres 22.7
Kolliker-Fuse nucleus
nTPM: 27.6
2315 Male, age 76, right hemisphere 29.8
2793 Female, age 91, left hemisphere 28.1
2163 Male, age 80, both hemispheres 24.9
Lateral lemniscal nuclei
nTPM: 26.3
2746 Female, age 85, left hemisphere 29.4
2320 Female, age 91, left hemisphere 28.1
2036 Male, age 80, both hemispheres 26.8
2453 Male, age 74, right hemisphere 26.1
2169 Male, age 76, both hemispheres 21.0
Lateral medullary reticular nucleus
nTPM: 29.4
2305 Male, age 74, both hemispheres 42.3
2852 Male, age 80, both hemispheres 31.8
2190 Female, age 85, both hemispheres 28.4
2044 Male, age 76, both hemispheres 26.0
2374 Male, age 61, both hemispheres 24.2
2804 Female, age 91, both hemispheres 24.0
Lateral parabrachial nucleus
nTPM: 28.9
2792 Male, age 76, both hemispheres 34.3
2790 Male, age 61, both hemispheres 29.5
2013 Male, age 80, both hemispheres 26.7
2139 Female, age 85, right hemisphere 24.9
Lateral vestibular nucleus
nTPM: 25.7
2311 Male, age 80, both hemispheres 26.8
2184 Male, age 76, both hemispheres 24.6
Locus coeruleus
nTPM: 28.7
2014 Male, age 55, unknown 32.1
1980 Male, age 76, both hemispheres 30.6
2788 Male, age 74, unknown 30.0
2162 Male, age 80, both hemispheres 27.9
2123 Female, age 91, both hemispheres 27.7
2317 Female, age 72, unknown 27.3
2720 Male, age 74, both hemispheres 25.0
Medial olivary nucleus
nTPM: 31.9
1943 Male, age 61, both hemispheres 37.1
1962 Male, age 76, both hemispheres 36.5
2851 Male, age 80, both hemispheres 31.3
2138 Female, age 91, both hemispheres 22.7
Medial parabrachial nucleus
nTPM: 28.2
2463 Female, age 85, right hemisphere 30.7
2156 Male, age 61, both hemispheres 28.6
2786 Male, age 76, both hemispheres 27.9
2854 Male, age 80, both hemispheres 27.5
2170 Female, age 91, both hemispheres 26.3
Medial periolivary nuclei
nTPM: 28.2
2081 Male, age 80, both hemispheres 33.0
2791 Male, age 74, right hemisphere 32.6
2458 Female, age 91, both hemispheres 30.7
2063 Male, age 76, both hemispheres 22.5
2171 Female, age 85, both hemispheres 22.1
Medial vestibular nucleus
nTPM: 24.1
2134 Male, age 76, both hemispheres 27.2
2624 Male, age 61, both hemispheres 26.9
2093 Male, age 80, both hemispheres 24.1
2801 Male, age 74, both hemispheres 24.1
2743 Female, age 85, both hemispheres 23.3
2803 Female, age 91, both hemispheres 19.1
Motor facial nucleus
nTPM: 24.6
2365 Male, age 74, right hemisphere 30.4
2697 Female, age 85, both hemispheres 28.8
2126 Male, age 61, both hemispheres 26.5
2327 Male, age 80, both hemispheres 21.8
2062 Male, age 76, both hemispheres 20.3
2795 Female, age 91, both hemispheres 20.0
Motor hypoglossal nucleus
nTPM: 27.6
2182 Male, age 80, both hemispheres 33.9
2277 Male, age 76, both hemispheres 29.5
2132 Female, age 85, both hemispheres 27.6
2461 Male, age 61, both hemispheres 24.2
2125 Female, age 91, both hemispheres 22.7
Motor trigeminal nucleus
nTPM: 26.8
2335 Male, age 61, both hemispheres 28.9
2321 Female, age 91, both hemispheres 28.5
2309 Male, age 76, both hemispheres 27.0
2560 Male, age 74, both hemispheres 26.8
2079 Male, age 80, both hemispheres 23.0
Nuclei of the trapezoid body
nTPM: 25.2
2159 Male, age 61, both hemispheres 26.5
2166 Male, age 80, both hemispheres 26.4
2735 Female, age 85, both hemispheres 26.4
2368 Female, age 91, both hemispheres 24.3
1983 Male, age 76, both hemispheres 22.4
Nucleus ambiguus
nTPM: 27.3
2096 Female, age 85, both hemispheres 27.8
2071 Male, age 76, both hemispheres 26.7
Nucleus cuneatus
nTPM: 27.2
2808 Female, age 85, both hemispheres 33.4
2380 Male, age 80, both hemispheres 30.5
2100 Male, age 76, both hemispheres 30.3
2131 Male, age 76, both hemispheres 29.1
2376 Male, age 61, both hemispheres 26.5
2381 Male, age 80, both hemispheres 25.8
2564 Male, age 74, both hemispheres 25.5
2562 Male, age 61, both hemispheres 23.2
2805 Female, age 91, both hemispheres 20.8
Nucleus gracilis
nTPM: 27.2
2627 Male, age 74, both hemispheres 27.6
2299 Female, age 85, both hemispheres 27.1
2382 Male, age 80, both hemispheres 26.8
Nucleus raphe magnus
nTPM: 24.1
2160 Male, age 61, both hemispheres 28.2
2459 Female, age 91, both hemispheres 27.1
2455 Male, age 74, both hemispheres 23.7
2172 Female, age 85, both hemispheres 22.5
2051 Male, age 76, both hemispheres 21.7
2328 Male, age 80, both hemispheres 21.5
Nucleus raphe obscurus
nTPM: 28.9
2142 Male, age 76, midline 36.1
2845 Female, age 85, midline 26.5
2800 Male, age 61, midline 24.0
Nucleus raphe pallidus
nTPM: 34.0
1924 Male, age 61, midline 37.3
2145 Male, age 76, midline 37.2
2183 Male, age 80, midline 27.6
Nucleus tractus solitarii
nTPM: 27.1
2307 Male, age 80, both hemispheres 29.6
2144 Female, age 91, right hemisphere 27.9
2656 Male, age 76, both hemispheres 25.6
2191 Female, age 85, both hemispheres 25.3
Paramedian reticular nucleus
nTPM: 28.4
2052 Male, age 76, both hemispheres 33.0
2313 Male, age 61, both hemispheres 30.6
2057 Male, age 80, both hemispheres 25.1
2050 Female, age 85, both hemispheres 24.9
Parvicellular reticular nuclei
nTPM: 27.4
2095 Male, age 76, both hemispheres 27.8
2558 Male, age 74, both hemispheres 27.7
2119 Male, age 80, both hemispheres 26.8
Parvicellular reticular nuclei, medullary
nTPM: 24.8
2091 Female, age 85, both hemispheres 26.8
2181 Male, age 80, left hemisphere 25.4
2189 Female, age 91, both hemispheres 22.1
Pedunculopontine tegmental nucleus
nTPM: 26.9
2338 Male, age 61, both hemispheres 33.1
2334 Male, age 80, both hemispheres 24.5
1921 Female, age 85, both hemispheres 23.1
Peritrigeminal nucleus
nTPM: 29.6
2067 Female, age 85, both hemispheres 29.9
2136 Male, age 76, both hemispheres 29.9
2179 Male, age 61, both hemispheres 29.0
Pontine nuclei
nTPM: 26.5
2115 Male, age 80, left hemisphere 36.0
2727 Male, age 61, right hemisphere 33.6
2319 Female, age 91, both hemispheres 28.7
2109 Female, age 72, unknown 27.6
2454 Male, age 74, left hemisphere 23.7
1968 Male, age 76, left hemisphere 21.4
2787 Female, age 85, both hemispheres 21.3
1863 Male, age 55, unknown 20.0
Pontine raphe nucleus
nTPM: 25.7
2853 Male, age 76, midline 27.3
2122 Female, age 85, midline 24.1
Posteroventral cochlear nucleus
nTPM: 30.9
2135 Female, age 91, both hemispheres 39.9
2341 Male, age 80, both hemispheres 35.4
2070 Male, age 76, both hemispheres 27.2
2371 Male, age 61, both hemispheres 26.7
2752 Female, age 85, both hemispheres 25.5
Prepositus hypoglossal nucleus
nTPM: 26.2
2086 Male, age 80, both hemispheres 28.2
2855 Female, age 85, right hemisphere 24.2
Principal sensory trigeminal nucleus
nTPM: 27.1
2367 Female, age 91, left hemisphere 32.5
2158 Male, age 61, both hemispheres 28.0
2324 Male, age 76, both hemispheres 25.8
2008 Male, age 80, left hemisphere 22.0
Reticular pontine nucleus, caudal
nTPM: 24.7
2559 Male, age 74, both hemispheres 28.2
2457 Female, age 91, both hemispheres 26.6
2092 Male, age 76, both hemispheres 23.7
2332 Male, age 80, right hemisphere 20.5
Reticular pontine nucleus, oral
nTPM: 24.3
2361 Male, age 74, both hemispheres 26.6
2167 Male, age 76, both hemispheres 26.0
2366 Female, age 91, both hemispheres 24.1
2012 Female, age 85, both hemispheres 22.7
1939 Male, age 80, both hemispheres 22.2
Reticulotegmental nucleus
nTPM: 25.0
2333 Male, age 80, both hemispheres 26.5
2325 Male, age 76, both hemispheres 25.6
2322 Female, age 91, both hemispheres 24.4
2452 Male, age 74, both hemispheres 23.7
Spinal trigeminal nucleus, caudal
nTPM: 25.4
2642 Male, age 74, both hemispheres 30.3
2312 Male, age 61, both hemispheres 26.5
2447 Male, age 76, both hemispheres 24.6
2308 Male, age 80, both hemispheres 24.3
2390 Female, age 91, both hemispheres 21.3
Spinal trigeminal nucleus, interpolar
nTPM: 25.6
2066 Male, age 76, right hemisphere 27.1
2386 Female, age 85, both hemispheres 26.7
2033 Male, age 80, both hemispheres 25.9
2625 Male, age 61, both hemispheres 24.6
2389 Female, age 91, both hemispheres 23.9
Spinal trigeminal nucleus, oral
nTPM: 26.8
2737 Female, age 85, both hemispheres 28.6
1978 Male, age 76, both hemispheres 26.6
2164 Male, age 80, both hemispheres 25.4
Spinal vestibular nucleus
nTPM: 25.3
2796 Male, age 61, both hemispheres 30.3
2780 Male, age 80, both hemispheres 26.4
2748 Male, age 76, both hemispheres 25.2
2806 Female, age 85, both hemispheres 25.2
2384 Male, age 74, both hemispheres 23.8
2186 Female, age 91, both hemispheres 20.7
Subcoeruleus area
nTPM: 25.0
2451 Male, age 74, both hemispheres 27.9
2323 Female, age 91, left hemisphere 25.4
2369 Female, age 85, left hemisphere 24.5
2089 Male, age 76, left hemisphere 23.8
1958 Male, age 80, both hemispheres 23.2
Superior olive
nTPM: 27.8
2561 Female, age 91, both hemispheres 33.3
2364 Male, age 74, right hemisphere 32.3
2020 Male, age 76, both hemispheres 25.6
1875 Female, age 85, both hemispheres 23.9
2329 Male, age 80, right hemisphere 23.7
Superior vestibular nucleus
nTPM: 29.1
2061 Male, age 76, both hemispheres 32.2
2015 Male, age 80, both hemispheres 27.7
2383 Male, age 74, both hemispheres 27.4
Ventral medullary reticular nucleus
nTPM: 23.6
2060 Male, age 76, both hemispheres 27.5
2372 Male, age 61, both hemispheres 19.8
Ventral periolivary nuclei
nTPM: 26.8
2794 Female, age 91, left hemisphere 34.9
2023 Male, age 76, both hemispheres 26.9
2130 Female, age 85, both hemispheres 24.8
2165 Male, age 80, both hemispheres 20.7
Ventrolateral medulla, A1-C1 cell groups
nTPM: 28.0
2118 Male, age 80, both hemispheres 32.4
2180 Male, age 61, both hemispheres 28.6
1986 Male, age 76, both hemispheres 27.6
2741 Female, age 85, both hemispheres 26.1
2302 Female, age 91, both hemispheres 25.2
Ventrolateral tegmental area, A5 NE cell group
nTPM: 25.5
2359 Male, age 61, both hemispheres 28.4
2840 Female, age 85, both hemispheres 27.3
2161 Male, age 80, both hemispheres 25.3
2449 Male, age 74, both hemispheres 25.1
2456 Female, age 91, both hemispheres 25.1
1959 Male, age 76, both hemispheres 21.9

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 11.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 11.7
FF:10182-103D2 60 years, female 11.8
FF:10165-103B3 76 years, female 11.6
Medulla oblongata
Scaled Tags Per Million: 9.6
FF:10155-103A2 76 years, female 11.3
FF:10038-101F2 18-64 years, mixed 10.3
FF:10174-103C3 60 years, female 7.1
Pons
Scaled Tags Per Million: 8.7
FF:10033-101E6 18-54 years, mixed 8.7

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 35.3
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 22.3
Samples: 4

Max nTPM: 27.0
Min nTPM: 11.6
Sample A Female 27.0
Sample B Female 25.3
Sample C Male 25.1
Sample D Male 11.6
Pons
nTPM: 35.3
Samples: 4

Max nTPM: 54.4
Min nTPM: 25.9
Sample A Female 54.4
Sample B Female 25.9
Sample C Male 27.6
Sample D Male 33.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 7.1
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 7.1
Samples: 4

Max nTPM: 7.5
Min nTPM: 6.4
Sample A Male 7.5
Sample B Male 7.4
Sample C Female 6.4
Sample D Female 7.0

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.4
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.4
678691 Antisense, RP_040914_02_D11, Mouse strain C57BL/6J (56 days, male) 0.4
Pons
Expression energy: 0.4
678691 Antisense, RP_040914_02_D11, Mouse strain C57BL/6J (56 days, male) 0.4

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