PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:125.7 nTPM
FANTOM5:287.4 Scaled Tags Per Million
Pig:35.9 nTPM
Mouse:173.9 nTPM
Allen mouse:0.8 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 125.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 70.7
2188 Female, age 91, both hemispheres 84.1
1984 Male, age 76, both hemispheres 72.9
2090 Male, age 80, both hemispheres 64.9
2301 Female, age 85, both hemispheres 61.0
Area postrema
nTPM: 47.4
2054 Male, age 76, both hemispheres 57.5
2306 Male, age 80, both hemispheres 44.8
2799 Male, age 61, both hemispheres 40.1
Dorsal cochlear nucleus
nTPM: 66.0
2187 Female, age 91, both hemispheres 85.9
2802 Male, age 74, right hemisphere 74.7
2058 Male, age 76, both hemispheres 63.1
2370 Male, age 61, both hemispheres 54.0
2378 Male, age 80, both hemispheres 52.1
Dorsal medullary reticular nucleus
nTPM: 78.3
2040 Female, age 85, both hemispheres 115.4
2373 Male, age 61, both hemispheres 62.1
2088 Male, age 76, both hemispheres 57.4
Dorsal motor vagal complex
nTPM: 68.4
2133 Female, age 91, both hemispheres 112.6
2000 Male, age 74, unknown 94.5
2844 Male, age 55, unknown 86.8
2813 Female, age 72, unknown 72.4
2643 Male, age 74, both hemispheres 55.7
2185 Male, age 76, both hemispheres 46.2
2807 Female, age 85, both hemispheres 41.6
2797 Male, age 61, both hemispheres 37.6
Dorsal tegmental nucleus
nTPM: 71.6
2326 Male, age 74, both hemispheres 88.1
2083 Male, age 80, both hemispheres 85.1
1936 Male, age 76, left hemisphere 64.9
2358 Male, age 61, both hemispheres 48.4
Dorsolateral tegmental area
nTPM: 71.7
2751 Female, age 85, both hemispheres 93.8
2654 Male, age 80, both hemispheres 77.7
2360 Male, age 74, both hemispheres 74.9
2141 Male, age 76, both hemispheres 66.1
2337 Male, age 61, both hemispheres 46.2
Gigantocellular reticular nuclei, medullary
nTPM: 80.0
2462 Male, age 74, both hemispheres 98.3
1876 Female, age 85, both hemispheres 91.7
2022 Male, age 76, right hemisphere 75.3
2310 Male, age 80, both hemispheres 73.4
2314 Male, age 61, both hemispheres 71.4
2387 Female, age 91, both hemispheres 69.8
Gigantocellular reticular nuclei, pars
nTPM: 80.4
2168 Male, age 76, both hemispheres 115.3
2084 Female, age 85, both hemispheres 90.6
2336 Male, age 61, both hemispheres 76.8
2706 Male, age 80, both hemispheres 60.2
2330 Male, age 80, both hemispheres 59.0
Inferior olive
nTPM: 66.9
2563 Male, age 74, both hemispheres 83.7
2085 Female, age 85, both hemispheres 81.0
2178 Male, age 61, both hemispheres 63.5
2628 Female, age 91, both hemispheres 56.4
2379 Male, age 80, both hemispheres 49.9
Kolliker-Fuse nucleus
nTPM: 87.9
2163 Male, age 80, both hemispheres 114.7
2793 Female, age 91, left hemisphere 79.8
2315 Male, age 76, right hemisphere 69.3
Lateral lemniscal nuclei
nTPM: 98.0
2169 Male, age 76, both hemispheres 123.1
2036 Male, age 80, both hemispheres 104.3
2746 Female, age 85, left hemisphere 97.0
2453 Male, age 74, right hemisphere 95.2
2320 Female, age 91, left hemisphere 70.3
Lateral medullary reticular nucleus
nTPM: 83.8
2305 Male, age 74, both hemispheres 117.2
2044 Male, age 76, both hemispheres 103.2
2190 Female, age 85, both hemispheres 74.9
2804 Female, age 91, both hemispheres 73.6
2374 Male, age 61, both hemispheres 68.9
2852 Male, age 80, both hemispheres 65.3
Lateral parabrachial nucleus
nTPM: 79.6
2139 Female, age 85, right hemisphere 107.7
2013 Male, age 80, both hemispheres 84.2
2792 Male, age 76, both hemispheres 64.9
2790 Male, age 61, both hemispheres 61.8
Lateral vestibular nucleus
nTPM: 88.6
2184 Male, age 76, both hemispheres 106.7
2311 Male, age 80, both hemispheres 70.4
Locus coeruleus
nTPM: 118.1
2014 Male, age 55, unknown 147.4
2123 Female, age 91, both hemispheres 147.2
2788 Male, age 74, unknown 122.9
2720 Male, age 74, both hemispheres 115.4
1980 Male, age 76, both hemispheres 106.6
2317 Female, age 72, unknown 97.4
2162 Male, age 80, both hemispheres 90.0
Medial olivary nucleus
nTPM: 68.7
1962 Male, age 76, both hemispheres 75.0
2138 Female, age 91, both hemispheres 74.1
1943 Male, age 61, both hemispheres 63.5
2851 Male, age 80, both hemispheres 62.3
Medial parabrachial nucleus
nTPM: 81.9
2170 Female, age 91, both hemispheres 102.7
2854 Male, age 80, both hemispheres 91.0
2463 Female, age 85, right hemisphere 75.0
2156 Male, age 61, both hemispheres 73.7
2786 Male, age 76, both hemispheres 67.3
Medial periolivary nuclei
nTPM: 102.6
2171 Female, age 85, both hemispheres 136.2
2063 Male, age 76, both hemispheres 133.0
2791 Male, age 74, right hemisphere 108.4
2081 Male, age 80, both hemispheres 72.2
2458 Female, age 91, both hemispheres 63.1
Medial vestibular nucleus
nTPM: 97.6
2801 Male, age 74, both hemispheres 118.3
2134 Male, age 76, both hemispheres 115.2
2743 Female, age 85, both hemispheres 99.0
2803 Female, age 91, both hemispheres 93.4
2093 Male, age 80, both hemispheres 87.6
2624 Male, age 61, both hemispheres 72.0
Motor facial nucleus
nTPM: 91.7
2062 Male, age 76, both hemispheres 133.8
2365 Male, age 74, right hemisphere 112.9
2697 Female, age 85, both hemispheres 84.5
2126 Male, age 61, both hemispheres 76.7
2327 Male, age 80, both hemispheres 75.2
2795 Female, age 91, both hemispheres 67.2
Motor hypoglossal nucleus
nTPM: 83.7
2125 Female, age 91, both hemispheres 110.5
2132 Female, age 85, both hemispheres 99.6
2461 Male, age 61, both hemispheres 84.7
2182 Male, age 80, both hemispheres 65.3
2277 Male, age 76, both hemispheres 58.5
Motor trigeminal nucleus
nTPM: 74.8
2079 Male, age 80, both hemispheres 91.9
2560 Male, age 74, both hemispheres 82.7
2309 Male, age 76, both hemispheres 71.3
2321 Female, age 91, both hemispheres 66.0
2335 Male, age 61, both hemispheres 62.1
Nuclei of the trapezoid body
nTPM: 112.4
2159 Male, age 61, both hemispheres 166.3
2735 Female, age 85, both hemispheres 125.5
1983 Male, age 76, both hemispheres 124.8
2166 Male, age 80, both hemispheres 82.9
2368 Female, age 91, both hemispheres 62.6
Nucleus ambiguus
nTPM: 65.9
2071 Male, age 76, both hemispheres 67.9
2096 Female, age 85, both hemispheres 63.9
Nucleus cuneatus
nTPM: 57.7
2131 Male, age 76, both hemispheres 76.8
2564 Male, age 74, both hemispheres 75.7
2376 Male, age 61, both hemispheres 60.7
2100 Male, age 76, both hemispheres 57.3
2381 Male, age 80, both hemispheres 56.3
2562 Male, age 61, both hemispheres 51.2
2380 Male, age 80, both hemispheres 51.0
2808 Female, age 85, both hemispheres 49.4
2805 Female, age 91, both hemispheres 41.2
Nucleus gracilis
nTPM: 54.5
2627 Male, age 74, both hemispheres 79.8
2382 Male, age 80, both hemispheres 47.4
2299 Female, age 85, both hemispheres 36.2
Nucleus raphe magnus
nTPM: 112.6
2160 Male, age 61, both hemispheres 180.2
2172 Female, age 85, both hemispheres 122.0
2455 Male, age 74, both hemispheres 119.6
2051 Male, age 76, both hemispheres 93.5
2328 Male, age 80, both hemispheres 87.8
2459 Female, age 91, both hemispheres 72.7
Nucleus raphe obscurus
nTPM: 75.5
2845 Female, age 85, midline 92.6
2800 Male, age 61, midline 78.7
2142 Male, age 76, midline 55.3
Nucleus raphe pallidus
nTPM: 87.7
2183 Male, age 80, midline 101.9
1924 Male, age 61, midline 100.7
2145 Male, age 76, midline 60.5
Nucleus tractus solitarii
nTPM: 79.8
2144 Female, age 91, right hemisphere 142.8
2656 Male, age 76, both hemispheres 67.0
2191 Female, age 85, both hemispheres 62.5
2307 Male, age 80, both hemispheres 46.7
Paramedian reticular nucleus
nTPM: 105.3
2050 Female, age 85, both hemispheres 132.8
2313 Male, age 61, both hemispheres 101.9
2057 Male, age 80, both hemispheres 101.7
2052 Male, age 76, both hemispheres 84.8
Parvicellular reticular nuclei
nTPM: 87.6
2119 Male, age 80, both hemispheres 97.0
2095 Male, age 76, both hemispheres 93.7
2558 Male, age 74, both hemispheres 72.2
Parvicellular reticular nuclei, medullary
nTPM: 92.6
2189 Female, age 91, both hemispheres 105.7
2091 Female, age 85, both hemispheres 101.3
2181 Male, age 80, left hemisphere 70.9
Pedunculopontine tegmental nucleus
nTPM: 81.5
2334 Male, age 80, both hemispheres 88.7
1921 Female, age 85, both hemispheres 82.0
2338 Male, age 61, both hemispheres 73.8
Peritrigeminal nucleus
nTPM: 93.3
2136 Male, age 76, both hemispheres 101.2
2179 Male, age 61, both hemispheres 92.5
2067 Female, age 85, both hemispheres 86.2
Pontine nuclei
nTPM: 125.7
2727 Male, age 61, right hemisphere 174.7
1863 Male, age 55, unknown 165.6
2109 Female, age 72, unknown 142.1
2787 Female, age 85, both hemispheres 131.4
2454 Male, age 74, left hemisphere 121.3
1968 Male, age 76, left hemisphere 116.5
2319 Female, age 91, both hemispheres 83.1
2115 Male, age 80, left hemisphere 70.7
Pontine raphe nucleus
nTPM: 103.1
2122 Female, age 85, midline 121.2
2853 Male, age 76, midline 84.9
Posteroventral cochlear nucleus
nTPM: 74.1
2752 Female, age 85, both hemispheres 94.8
2070 Male, age 76, both hemispheres 80.4
2135 Female, age 91, both hemispheres 72.6
2341 Male, age 80, both hemispheres 67.7
2371 Male, age 61, both hemispheres 54.9
Prepositus hypoglossal nucleus
nTPM: 86.1
2855 Female, age 85, right hemisphere 106.3
2086 Male, age 80, both hemispheres 66.0
Principal sensory trigeminal nucleus
nTPM: 103.7
2158 Male, age 61, both hemispheres 137.7
2008 Male, age 80, left hemisphere 110.8
2324 Male, age 76, both hemispheres 87.6
2367 Female, age 91, left hemisphere 78.7
Reticular pontine nucleus, caudal
nTPM: 89.9
2092 Male, age 76, both hemispheres 103.7
2559 Male, age 74, both hemispheres 94.8
2332 Male, age 80, right hemisphere 90.2
2457 Female, age 91, both hemispheres 70.9
Reticular pontine nucleus, oral
nTPM: 89.9
2012 Female, age 85, both hemispheres 109.4
2361 Male, age 74, both hemispheres 104.7
1939 Male, age 80, both hemispheres 86.6
2366 Female, age 91, both hemispheres 75.1
2167 Male, age 76, both hemispheres 73.8
Reticulotegmental nucleus
nTPM: 78.2
2325 Male, age 76, both hemispheres 92.8
2452 Male, age 74, both hemispheres 78.0
2322 Female, age 91, both hemispheres 73.9
2333 Male, age 80, both hemispheres 68.3
Spinal trigeminal nucleus, caudal
nTPM: 80.4
2390 Female, age 91, both hemispheres 131.9
2447 Male, age 76, both hemispheres 79.8
2312 Male, age 61, both hemispheres 64.5
2642 Male, age 74, both hemispheres 64.0
2308 Male, age 80, both hemispheres 61.7
Spinal trigeminal nucleus, interpolar
nTPM: 112.3
2625 Male, age 61, both hemispheres 172.8
2066 Male, age 76, right hemisphere 131.4
2033 Male, age 80, both hemispheres 89.2
2389 Female, age 91, both hemispheres 86.4
2386 Female, age 85, both hemispheres 81.9
Spinal trigeminal nucleus, oral
nTPM: 88.7
2737 Female, age 85, both hemispheres 101.4
2164 Male, age 80, both hemispheres 95.1
1978 Male, age 76, both hemispheres 69.5
Spinal vestibular nucleus
nTPM: 80.3
2186 Female, age 91, both hemispheres 91.3
2806 Female, age 85, both hemispheres 86.3
2780 Male, age 80, both hemispheres 85.3
2748 Male, age 76, both hemispheres 81.5
2384 Male, age 74, both hemispheres 70.4
2796 Male, age 61, both hemispheres 67.0
Subcoeruleus area
nTPM: 87.4
1958 Male, age 80, both hemispheres 99.2
2323 Female, age 91, left hemisphere 95.3
2089 Male, age 76, left hemisphere 85.9
2369 Female, age 85, left hemisphere 81.7
2451 Male, age 74, both hemispheres 74.7
Superior olive
nTPM: 99.4
1875 Female, age 85, both hemispheres 132.9
2364 Male, age 74, right hemisphere 123.1
2020 Male, age 76, both hemispheres 99.0
2329 Male, age 80, right hemisphere 78.4
2561 Female, age 91, both hemispheres 63.6
Superior vestibular nucleus
nTPM: 82.4
2383 Male, age 74, both hemispheres 92.5
2015 Male, age 80, both hemispheres 86.9
2061 Male, age 76, both hemispheres 67.9
Ventral medullary reticular nucleus
nTPM: 68.3
2060 Male, age 76, both hemispheres 70.5
2372 Male, age 61, both hemispheres 66.2
Ventral periolivary nuclei
nTPM: 97.1
2165 Male, age 80, both hemispheres 110.6
2130 Female, age 85, both hemispheres 109.4
2023 Male, age 76, both hemispheres 102.0
2794 Female, age 91, left hemisphere 66.5
Ventrolateral medulla, A1-C1 cell groups
nTPM: 86.9
2741 Female, age 85, both hemispheres 104.6
1986 Male, age 76, both hemispheres 100.8
2180 Male, age 61, both hemispheres 89.4
2302 Female, age 91, both hemispheres 73.0
2118 Male, age 80, both hemispheres 66.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 84.3
2449 Male, age 74, both hemispheres 100.7
2840 Female, age 85, both hemispheres 95.9
1959 Male, age 76, both hemispheres 95.5
2161 Male, age 80, both hemispheres 82.4
2359 Male, age 61, both hemispheres 70.2
2456 Female, age 91, both hemispheres 61.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 287.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 155.6
FF:10182-103D2 60 years, female 184.3
FF:10165-103B3 76 years, female 126.9
Medulla oblongata
Scaled Tags Per Million: 113.2
FF:10038-101F2 18-64 years, mixed 142.1
FF:10155-103A2 76 years, female 105.6
FF:10174-103C3 60 years, female 91.9
Pons
Scaled Tags Per Million: 287.4
FF:10033-101E6 18-54 years, mixed 287.4

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 35.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 29.3
Samples: 4

Max nTPM: 31.1
Min nTPM: 25.0
Sample A Female 31.1
Sample B Female 30.7
Sample C Male 30.4
Sample D Male 25.0
Pons
nTPM: 35.9
Samples: 4

Max nTPM: 40.8
Min nTPM: 27.4
Sample A Female 36.9
Sample B Female 27.4
Sample C Male 40.8
Sample D Male 38.4

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 173.9
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 173.9
Samples: 4

Max nTPM: 177.1
Min nTPM: 171.1
Sample A Male 174.4
Sample B Male 173.0
Sample C Female 177.1
Sample D Female 171.1

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 0.8
73423926 Antisense, RP_051019_03_B08, Mouse strain C57BL/6J (56 days, male) 0.8
Pons
Expression energy: 0.3
73423926 Antisense, RP_051019_03_B08, Mouse strain C57BL/6J (56 days, male) 0.3

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