PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:127.5 nTPM
FANTOM5:93.7 Scaled Tags Per Million
Pig:35.8 nTPM
Mouse:27.6 nTPM
Allen mouse:1.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 127.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 76.1
2301 Female, age 85, both hemispheres 98.4
1984 Male, age 76, both hemispheres 80.5
2090 Male, age 80, both hemispheres 67.2
2188 Female, age 91, both hemispheres 58.1
Area postrema
nTPM: 127.5
2799 Male, age 61, both hemispheres 188.6
2306 Male, age 80, both hemispheres 115.0
2054 Male, age 76, both hemispheres 79.0
Dorsal cochlear nucleus
nTPM: 71.4
2802 Male, age 74, right hemisphere 76.0
2378 Male, age 80, both hemispheres 75.7
2058 Male, age 76, both hemispheres 71.8
2370 Male, age 61, both hemispheres 69.1
2187 Female, age 91, both hemispheres 64.5
Dorsal medullary reticular nucleus
nTPM: 62.6
2373 Male, age 61, both hemispheres 77.3
2088 Male, age 76, both hemispheres 70.7
2040 Female, age 85, both hemispheres 39.6
Dorsal motor vagal complex
nTPM: 93.9
2797 Male, age 61, both hemispheres 146.7
2185 Male, age 76, both hemispheres 109.6
2643 Male, age 74, both hemispheres 104.0
2844 Male, age 55, unknown 93.0
2807 Female, age 85, both hemispheres 88.2
2813 Female, age 72, unknown 82.3
2000 Male, age 74, unknown 64.3
2133 Female, age 91, both hemispheres 63.3
Dorsal tegmental nucleus
nTPM: 79.0
2358 Male, age 61, both hemispheres 128.5
2083 Male, age 80, both hemispheres 70.4
2326 Male, age 74, both hemispheres 59.0
1936 Male, age 76, left hemisphere 58.0
Dorsolateral tegmental area
nTPM: 68.4
2337 Male, age 61, both hemispheres 118.8
2654 Male, age 80, both hemispheres 64.2
2141 Male, age 76, both hemispheres 61.0
2360 Male, age 74, both hemispheres 49.6
2751 Female, age 85, both hemispheres 48.6
Gigantocellular reticular nuclei, medullary
nTPM: 68.7
2314 Male, age 61, both hemispheres 90.2
2310 Male, age 80, both hemispheres 87.3
2387 Female, age 91, both hemispheres 69.8
2462 Male, age 74, both hemispheres 66.9
2022 Male, age 76, right hemisphere 51.4
1876 Female, age 85, both hemispheres 46.7
Gigantocellular reticular nuclei, pars
nTPM: 80.1
2330 Male, age 80, both hemispheres 100.1
2706 Male, age 80, both hemispheres 98.6
2168 Male, age 76, both hemispheres 89.1
2336 Male, age 61, both hemispheres 61.0
2084 Female, age 85, both hemispheres 51.6
Inferior olive
nTPM: 94.3
2628 Female, age 91, both hemispheres 130.0
2379 Male, age 80, both hemispheres 110.1
2178 Male, age 61, both hemispheres 79.4
2085 Female, age 85, both hemispheres 76.9
2563 Male, age 74, both hemispheres 74.9
Kolliker-Fuse nucleus
nTPM: 81.6
2315 Male, age 76, right hemisphere 100.9
2793 Female, age 91, left hemisphere 81.2
2163 Male, age 80, both hemispheres 62.9
Lateral lemniscal nuclei
nTPM: 79.5
2169 Male, age 76, both hemispheres 90.1
2746 Female, age 85, left hemisphere 88.7
2320 Female, age 91, left hemisphere 77.8
2036 Male, age 80, both hemispheres 74.1
2453 Male, age 74, right hemisphere 67.0
Lateral medullary reticular nucleus
nTPM: 72.6
2852 Male, age 80, both hemispheres 83.5
2804 Female, age 91, both hemispheres 83.0
2374 Male, age 61, both hemispheres 79.9
2044 Male, age 76, both hemispheres 69.7
2190 Female, age 85, both hemispheres 63.1
2305 Male, age 74, both hemispheres 56.3
Lateral parabrachial nucleus
nTPM: 80.6
2139 Female, age 85, right hemisphere 89.4
2792 Male, age 76, both hemispheres 88.0
2790 Male, age 61, both hemispheres 78.8
2013 Male, age 80, both hemispheres 66.1
Lateral vestibular nucleus
nTPM: 74.6
2311 Male, age 80, both hemispheres 83.8
2184 Male, age 76, both hemispheres 65.5
Locus coeruleus
nTPM: 55.3
2720 Male, age 74, both hemispheres 65.3
2162 Male, age 80, both hemispheres 64.5
1980 Male, age 76, both hemispheres 58.4
2317 Female, age 72, unknown 56.4
2123 Female, age 91, both hemispheres 55.8
2014 Male, age 55, unknown 43.8
2788 Male, age 74, unknown 42.9
Medial olivary nucleus
nTPM: 75.9
2851 Male, age 80, both hemispheres 105.3
1962 Male, age 76, both hemispheres 76.1
2138 Female, age 91, both hemispheres 68.9
1943 Male, age 61, both hemispheres 53.4
Medial parabrachial nucleus
nTPM: 67.5
2156 Male, age 61, both hemispheres 76.3
2854 Male, age 80, both hemispheres 76.1
2786 Male, age 76, both hemispheres 63.6
2170 Female, age 91, both hemispheres 62.4
2463 Female, age 85, right hemisphere 58.9
Medial periolivary nuclei
nTPM: 74.3
2171 Female, age 85, both hemispheres 97.5
2063 Male, age 76, both hemispheres 81.9
2458 Female, age 91, both hemispheres 69.8
2081 Male, age 80, both hemispheres 69.2
2791 Male, age 74, right hemisphere 53.0
Medial vestibular nucleus
nTPM: 67.5
2624 Male, age 61, both hemispheres 105.6
2134 Male, age 76, both hemispheres 64.9
2743 Female, age 85, both hemispheres 63.2
2801 Male, age 74, both hemispheres 62.6
2803 Female, age 91, both hemispheres 56.4
2093 Male, age 80, both hemispheres 52.6
Motor facial nucleus
nTPM: 82.8
2795 Female, age 91, both hemispheres 103.9
2327 Male, age 80, both hemispheres 103.8
2697 Female, age 85, both hemispheres 103.4
2062 Male, age 76, both hemispheres 75.1
2365 Male, age 74, right hemisphere 58.9
2126 Male, age 61, both hemispheres 51.6
Motor hypoglossal nucleus
nTPM: 64.9
2182 Male, age 80, both hemispheres 79.4
2461 Male, age 61, both hemispheres 68.5
2277 Male, age 76, both hemispheres 68.0
2125 Female, age 91, both hemispheres 58.6
2132 Female, age 85, both hemispheres 50.1
Motor trigeminal nucleus
nTPM: 72.9
2079 Male, age 80, both hemispheres 79.5
2321 Female, age 91, both hemispheres 74.0
2335 Male, age 61, both hemispheres 72.0
2560 Male, age 74, both hemispheres 70.0
2309 Male, age 76, both hemispheres 68.8
Nuclei of the trapezoid body
nTPM: 78.5
2735 Female, age 85, both hemispheres 85.3
2368 Female, age 91, both hemispheres 81.6
1983 Male, age 76, both hemispheres 80.5
2166 Male, age 80, both hemispheres 76.7
2159 Male, age 61, both hemispheres 68.1
Nucleus ambiguus
nTPM: 76.2
2071 Male, age 76, both hemispheres 79.5
2096 Female, age 85, both hemispheres 72.9
Nucleus cuneatus
nTPM: 90.0
2805 Female, age 91, both hemispheres 116.8
2808 Female, age 85, both hemispheres 97.6
2562 Male, age 61, both hemispheres 90.5
2564 Male, age 74, both hemispheres 90.4
2380 Male, age 80, both hemispheres 88.5
2100 Male, age 76, both hemispheres 83.5
2376 Male, age 61, both hemispheres 83.0
2131 Male, age 76, both hemispheres 81.0
2381 Male, age 80, both hemispheres 78.8
Nucleus gracilis
nTPM: 97.9
2299 Female, age 85, both hemispheres 110.0
2627 Male, age 74, both hemispheres 94.2
2382 Male, age 80, both hemispheres 89.4
Nucleus raphe magnus
nTPM: 81.4
2172 Female, age 85, both hemispheres 103.6
2051 Male, age 76, both hemispheres 90.1
2328 Male, age 80, both hemispheres 88.7
2160 Male, age 61, both hemispheres 71.1
2455 Male, age 74, both hemispheres 68.6
2459 Female, age 91, both hemispheres 66.6
Nucleus raphe obscurus
nTPM: 74.7
2142 Male, age 76, midline 90.8
2845 Female, age 85, midline 71.9
2800 Male, age 61, midline 61.5
Nucleus raphe pallidus
nTPM: 80.2
2145 Male, age 76, midline 93.1
2183 Male, age 80, midline 77.1
1924 Male, age 61, midline 70.5
Nucleus tractus solitarii
nTPM: 73.5
2307 Male, age 80, both hemispheres 95.6
2191 Female, age 85, both hemispheres 88.2
2656 Male, age 76, both hemispheres 67.7
2144 Female, age 91, right hemisphere 42.5
Paramedian reticular nucleus
nTPM: 56.4
2050 Female, age 85, both hemispheres 63.6
2057 Male, age 80, both hemispheres 58.8
2313 Male, age 61, both hemispheres 54.7
2052 Male, age 76, both hemispheres 48.6
Parvicellular reticular nuclei
nTPM: 66.7
2558 Male, age 74, both hemispheres 76.1
2095 Male, age 76, both hemispheres 66.6
2119 Male, age 80, both hemispheres 57.4
Parvicellular reticular nuclei, medullary
nTPM: 63.2
2181 Male, age 80, left hemisphere 70.5
2189 Female, age 91, both hemispheres 61.0
2091 Female, age 85, both hemispheres 58.0
Pedunculopontine tegmental nucleus
nTPM: 64.4
2338 Male, age 61, both hemispheres 84.7
2334 Male, age 80, both hemispheres 61.6
1921 Female, age 85, both hemispheres 46.9
Peritrigeminal nucleus
nTPM: 77.4
2136 Male, age 76, both hemispheres 85.6
2067 Female, age 85, both hemispheres 75.4
2179 Male, age 61, both hemispheres 71.2
Pontine nuclei
nTPM: 74.8
2787 Female, age 85, both hemispheres 106.0
1863 Male, age 55, unknown 89.7
2115 Male, age 80, left hemisphere 82.9
1968 Male, age 76, left hemisphere 82.0
2109 Female, age 72, unknown 66.9
2319 Female, age 91, both hemispheres 62.9
2727 Male, age 61, right hemisphere 55.2
2454 Male, age 74, left hemisphere 52.7
Pontine raphe nucleus
nTPM: 68.4
2853 Male, age 76, midline 69.1
2122 Female, age 85, midline 67.6
Posteroventral cochlear nucleus
nTPM: 61.2
2371 Male, age 61, both hemispheres 80.5
2341 Male, age 80, both hemispheres 68.4
2070 Male, age 76, both hemispheres 65.7
2135 Female, age 91, both hemispheres 47.5
2752 Female, age 85, both hemispheres 44.0
Prepositus hypoglossal nucleus
nTPM: 64.0
2086 Male, age 80, both hemispheres 67.4
2855 Female, age 85, right hemisphere 60.6
Principal sensory trigeminal nucleus
nTPM: 69.4
2324 Male, age 76, both hemispheres 77.5
2158 Male, age 61, both hemispheres 73.6
2367 Female, age 91, left hemisphere 69.0
2008 Male, age 80, left hemisphere 57.6
Reticular pontine nucleus, caudal
nTPM: 72.3
2332 Male, age 80, right hemisphere 93.5
2092 Male, age 76, both hemispheres 79.9
2457 Female, age 91, both hemispheres 62.2
2559 Male, age 74, both hemispheres 53.6
Reticular pontine nucleus, oral
nTPM: 63.5
2366 Female, age 91, both hemispheres 68.2
2361 Male, age 74, both hemispheres 67.8
2012 Female, age 85, both hemispheres 63.4
1939 Male, age 80, both hemispheres 61.6
2167 Male, age 76, both hemispheres 56.5
Reticulotegmental nucleus
nTPM: 74.1
2333 Male, age 80, both hemispheres 81.3
2325 Male, age 76, both hemispheres 72.9
2452 Male, age 74, both hemispheres 71.6
2322 Female, age 91, both hemispheres 70.4
Spinal trigeminal nucleus, caudal
nTPM: 74.2
2308 Male, age 80, both hemispheres 87.9
2312 Male, age 61, both hemispheres 79.8
2447 Male, age 76, both hemispheres 71.2
2642 Male, age 74, both hemispheres 71.2
2390 Female, age 91, both hemispheres 61.1
Spinal trigeminal nucleus, interpolar
nTPM: 63.4
2625 Male, age 61, both hemispheres 83.9
2389 Female, age 91, both hemispheres 65.4
2066 Male, age 76, right hemisphere 65.3
2033 Male, age 80, both hemispheres 53.0
2386 Female, age 85, both hemispheres 49.5
Spinal trigeminal nucleus, oral
nTPM: 58.2
2164 Male, age 80, both hemispheres 71.6
1978 Male, age 76, both hemispheres 55.5
2737 Female, age 85, both hemispheres 47.5
Spinal vestibular nucleus
nTPM: 57.9
2796 Male, age 61, both hemispheres 75.0
2780 Male, age 80, both hemispheres 60.5
2748 Male, age 76, both hemispheres 58.5
2806 Female, age 85, both hemispheres 54.5
2384 Male, age 74, both hemispheres 51.4
2186 Female, age 91, both hemispheres 47.7
Subcoeruleus area
nTPM: 62.9
2089 Male, age 76, left hemisphere 79.0
2451 Male, age 74, both hemispheres 65.9
2323 Female, age 91, left hemisphere 60.9
1958 Male, age 80, both hemispheres 57.8
2369 Female, age 85, left hemisphere 51.0
Superior olive
nTPM: 74.6
2329 Male, age 80, right hemisphere 86.5
2561 Female, age 91, both hemispheres 85.7
1875 Female, age 85, both hemispheres 76.2
2020 Male, age 76, both hemispheres 67.0
2364 Male, age 74, right hemisphere 57.3
Superior vestibular nucleus
nTPM: 63.6
2061 Male, age 76, both hemispheres 82.4
2015 Male, age 80, both hemispheres 58.0
2383 Male, age 74, both hemispheres 50.3
Ventral medullary reticular nucleus
nTPM: 66.4
2372 Male, age 61, both hemispheres 71.9
2060 Male, age 76, both hemispheres 60.9
Ventral periolivary nuclei
nTPM: 83.9
2130 Female, age 85, both hemispheres 103.6
2165 Male, age 80, both hemispheres 82.6
2794 Female, age 91, left hemisphere 82.5
2023 Male, age 76, both hemispheres 66.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 74.0
2302 Female, age 91, both hemispheres 93.4
1986 Male, age 76, both hemispheres 74.7
2118 Male, age 80, both hemispheres 70.7
2180 Male, age 61, both hemispheres 67.2
2741 Female, age 85, both hemispheres 63.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 75.7
2161 Male, age 80, both hemispheres 86.5
2840 Female, age 85, both hemispheres 77.4
1959 Male, age 76, both hemispheres 77.1
2456 Female, age 91, both hemispheres 76.4
2359 Male, age 61, both hemispheres 68.7
2449 Male, age 74, both hemispheres 68.3

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 93.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 77.4
FF:10182-103D2 60 years, female 79.5
FF:10165-103B3 76 years, female 75.4
Medulla oblongata
Scaled Tags Per Million: 93.7
FF:10038-101F2 18-64 years, mixed 105.2
FF:10155-103A2 76 years, female 105.0
FF:10174-103C3 60 years, female 71.1
Pons
Scaled Tags Per Million: 79.9
FF:10033-101E6 18-54 years, mixed 79.9

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 35.8
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 35.8
Samples: 4

Max nTPM: 41.6
Min nTPM: 30.2
Sample A Female 30.2
Sample B Female 41.6
Sample C Male 37.2
Sample D Male 34.2
Pons
nTPM: 34.3
Samples: 4

Max nTPM: 47.7
Min nTPM: 27.3
Sample A Female 47.7
Sample B Female 27.3
Sample C Male 28.2
Sample D Male 33.8

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 27.6
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 27.7
Samples: 4

Max nTPM: 30.2
Min nTPM: 25.6
Sample A Male 27.3
Sample B Male 30.2
Sample C Female 25.6
Sample D Female 27.5

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 1.7
77620501 Antisense, RP_070129_03_F06, Mouse strain C57BL/6J (56 days, male) 1.7
Pons
Expression energy: 1.4
77620501 Antisense, RP_070129_03_F06, Mouse strain C57BL/6J (56 days, male) 1.4

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