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HNRNPA2B1
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  • HNRNPA2B1
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:335.4 nTPM
FANTOM5:658.9 Scaled Tags Per Million
Pig:188.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA001666Antibody CAB012403
Glial cells HighHigh
Neuronal cells -High





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

335.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 335.4
Samples: 246

Max nTPM: 485.3
Min nTPM: 228.9
Std nTPM: 41.9
Median nTPM: 328.2
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 485.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 467.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 461.9
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 457.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 436.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 425.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 423.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 421.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 420.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 420.0
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 413.4
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 413.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 410.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 410.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 409.3
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 408.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 408.7
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 407.8
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 407.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 406.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 405.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 399.4
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 397.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 396.4
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 392.1
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 392.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 391.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 391.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 389.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 389.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 388.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 388.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 387.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 385.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 382.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 379.4
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 379.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 378.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 376.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 375.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 375.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 375.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 374.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 374.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 373.5
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 372.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 371.0
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 368.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 368.0
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 367.6
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 367.6
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 367.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 366.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 366.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 364.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 364.3
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 363.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 362.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 360.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 360.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 359.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 358.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 358.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 356.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 356.6
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 356.3
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 355.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 354.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 353.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 353.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 353.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 353.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 352.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 352.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 352.1
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 352.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 351.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 350.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 349.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 347.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 347.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 346.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 345.6
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 345.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 343.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 343.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 343.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 342.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 342.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 342.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 342.4
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 342.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 341.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 341.4
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 340.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 340.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 338.6
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 338.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 338.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 337.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 337.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 337.0
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 336.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 336.4
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 336.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 334.0
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 333.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 333.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 333.2
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 332.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 331.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 331.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 330.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 330.8
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 330.7
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 330.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 330.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 330.0
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 329.9
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 329.0
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 328.8
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 328.5
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 328.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 328.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 327.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 327.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 327.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 327.0
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 326.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 326.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 326.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 326.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 326.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 325.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 325.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 325.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 325.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 324.7
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 324.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 324.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 324.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 324.5
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 324.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 322.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 321.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 321.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 320.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 319.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 319.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 319.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 319.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 319.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 318.5
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 318.5
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 318.2
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 318.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 318.1
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 317.4
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 316.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 315.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 315.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 315.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 314.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 314.5
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 314.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 314.3
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 314.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 314.0
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 313.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 313.7
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 313.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 313.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 313.2
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 312.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 311.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 311.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 310.9
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 310.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 310.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 309.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 309.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 307.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 307.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 306.8
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 306.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 306.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 305.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 305.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 305.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 304.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 304.4
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 303.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 303.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 302.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 302.5
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 301.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 301.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 300.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 300.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 299.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 299.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 298.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 297.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 297.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 296.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 296.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 296.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 295.3
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 294.9
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 294.7
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 294.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 292.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 292.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 292.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 291.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 291.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 291.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 290.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 290.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 288.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 288.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 288.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 287.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 287.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 285.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 285.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 285.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 284.3
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 284.1
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 281.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 280.7
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 278.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 277.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 276.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 276.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 276.5
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 275.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 272.8
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 268.5
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 268.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 267.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 266.8
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 264.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 253.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 244.9
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 228.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

658.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 658.9
FF:10164-103B2 76 years, female 658.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

188.2
Pig sample Sample description nTPM
Caudate
nTPM: 188.2
Samples: 4

Max nTPM: 203.2
Min nTPM: 165.8
Sample A Female 203.2
Sample B Female 165.8
Sample C Male 200.0
Sample D Male 183.9

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