PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:238.3 nTPM
FANTOM5:174.1 Scaled Tags Per Million
Pig:129.9 nTPM
Mouse:15.7 nTPM
Allen mouse:3.7 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 238.3
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 137.2
1984 Male, age 76, both hemispheres 170.0
2090 Male, age 80, both hemispheres 151.9
2301 Female, age 85, both hemispheres 120.8
2188 Female, age 91, both hemispheres 106.1
Area postrema
nTPM: 238.3
2799 Male, age 61, both hemispheres 311.1
2306 Male, age 80, both hemispheres 219.5
2054 Male, age 76, both hemispheres 184.4
Dorsal cochlear nucleus
nTPM: 167.0
2370 Male, age 61, both hemispheres 192.3
2802 Male, age 74, right hemisphere 178.7
2378 Male, age 80, both hemispheres 168.3
2058 Male, age 76, both hemispheres 162.2
2187 Female, age 91, both hemispheres 133.8
Dorsal medullary reticular nucleus
nTPM: 152.1
2373 Male, age 61, both hemispheres 156.9
2088 Male, age 76, both hemispheres 154.3
2040 Female, age 85, both hemispheres 145.1
Dorsal motor vagal complex
nTPM: 193.4
2643 Male, age 74, both hemispheres 248.2
2797 Male, age 61, both hemispheres 212.0
2844 Male, age 55, unknown 210.3
2185 Male, age 76, both hemispheres 203.0
2000 Male, age 74, unknown 189.5
2813 Female, age 72, unknown 183.4
2133 Female, age 91, both hemispheres 158.3
2807 Female, age 85, both hemispheres 142.7
Dorsal tegmental nucleus
nTPM: 169.6
2358 Male, age 61, both hemispheres 206.4
2083 Male, age 80, both hemispheres 163.9
2326 Male, age 74, both hemispheres 159.8
1936 Male, age 76, left hemisphere 148.2
Dorsolateral tegmental area
nTPM: 183.0
2337 Male, age 61, both hemispheres 308.4
2654 Male, age 80, both hemispheres 162.6
2141 Male, age 76, both hemispheres 160.1
2360 Male, age 74, both hemispheres 147.9
2751 Female, age 85, both hemispheres 136.1
Gigantocellular reticular nuclei, medullary
nTPM: 144.8
2314 Male, age 61, both hemispheres 179.2
1876 Female, age 85, both hemispheres 145.6
2022 Male, age 76, right hemisphere 141.8
2462 Male, age 74, both hemispheres 139.7
2387 Female, age 91, both hemispheres 135.3
2310 Male, age 80, both hemispheres 127.0
Gigantocellular reticular nuclei, pars
nTPM: 151.7
2084 Female, age 85, both hemispheres 167.9
2336 Male, age 61, both hemispheres 162.0
2330 Male, age 80, both hemispheres 148.1
2706 Male, age 80, both hemispheres 144.7
2168 Male, age 76, both hemispheres 135.6
Inferior olive
nTPM: 217.2
2563 Male, age 74, both hemispheres 252.3
2379 Male, age 80, both hemispheres 216.7
2085 Female, age 85, both hemispheres 212.0
2178 Male, age 61, both hemispheres 202.6
2628 Female, age 91, both hemispheres 202.5
Kolliker-Fuse nucleus
nTPM: 152.2
2315 Male, age 76, right hemisphere 202.5
2163 Male, age 80, both hemispheres 150.6
2793 Female, age 91, left hemisphere 103.4
Lateral lemniscal nuclei
nTPM: 122.9
2746 Female, age 85, left hemisphere 142.1
2169 Male, age 76, both hemispheres 132.3
2453 Male, age 74, right hemisphere 124.1
2036 Male, age 80, both hemispheres 113.6
2320 Female, age 91, left hemisphere 102.2
Lateral medullary reticular nucleus
nTPM: 169.3
2804 Female, age 91, both hemispheres 201.2
2852 Male, age 80, both hemispheres 199.4
2374 Male, age 61, both hemispheres 184.7
2190 Female, age 85, both hemispheres 154.9
2305 Male, age 74, both hemispheres 147.2
2044 Male, age 76, both hemispheres 128.1
Lateral parabrachial nucleus
nTPM: 150.1
2139 Female, age 85, right hemisphere 174.2
2013 Male, age 80, both hemispheres 152.7
2790 Male, age 61, both hemispheres 138.8
2792 Male, age 76, both hemispheres 134.7
Lateral vestibular nucleus
nTPM: 167.2
2311 Male, age 80, both hemispheres 174.6
2184 Male, age 76, both hemispheres 159.9
Locus coeruleus
nTPM: 159.6
2317 Female, age 72, unknown 176.8
2123 Female, age 91, both hemispheres 173.6
1980 Male, age 76, both hemispheres 171.6
2014 Male, age 55, unknown 161.8
2162 Male, age 80, both hemispheres 154.3
2788 Male, age 74, unknown 140.6
2720 Male, age 74, both hemispheres 138.9
Medial olivary nucleus
nTPM: 194.6
2138 Female, age 91, both hemispheres 235.3
1943 Male, age 61, both hemispheres 194.1
2851 Male, age 80, both hemispheres 177.7
1962 Male, age 76, both hemispheres 171.5
Medial parabrachial nucleus
nTPM: 154.2
2156 Male, age 61, both hemispheres 181.8
2463 Female, age 85, right hemisphere 156.4
2786 Male, age 76, both hemispheres 154.8
2854 Male, age 80, both hemispheres 142.0
2170 Female, age 91, both hemispheres 135.8
Medial periolivary nuclei
nTPM: 125.7
2081 Male, age 80, both hemispheres 148.1
2171 Female, age 85, both hemispheres 128.2
2791 Male, age 74, right hemisphere 121.2
2063 Male, age 76, both hemispheres 120.9
2458 Female, age 91, both hemispheres 109.8
Medial vestibular nucleus
nTPM: 151.5
2624 Male, age 61, both hemispheres 175.7
2134 Male, age 76, both hemispheres 156.3
2093 Male, age 80, both hemispheres 152.5
2743 Female, age 85, both hemispheres 148.1
2801 Male, age 74, both hemispheres 141.2
2803 Female, age 91, both hemispheres 135.1
Motor facial nucleus
nTPM: 130.4
2795 Female, age 91, both hemispheres 180.8
2126 Male, age 61, both hemispheres 139.3
2062 Male, age 76, both hemispheres 134.3
2365 Male, age 74, right hemisphere 123.3
2327 Male, age 80, both hemispheres 104.6
2697 Female, age 85, both hemispheres 100.2
Motor hypoglossal nucleus
nTPM: 151.2
2277 Male, age 76, both hemispheres 190.0
2461 Male, age 61, both hemispheres 158.9
2182 Male, age 80, both hemispheres 149.6
2125 Female, age 91, both hemispheres 142.9
2132 Female, age 85, both hemispheres 114.4
Motor trigeminal nucleus
nTPM: 138.6
2335 Male, age 61, both hemispheres 195.0
2309 Male, age 76, both hemispheres 136.7
2079 Male, age 80, both hemispheres 133.1
2560 Male, age 74, both hemispheres 120.4
2321 Female, age 91, both hemispheres 108.0
Nuclei of the trapezoid body
nTPM: 125.3
2368 Female, age 91, both hemispheres 136.1
1983 Male, age 76, both hemispheres 131.7
2735 Female, age 85, both hemispheres 125.7
2159 Male, age 61, both hemispheres 117.5
2166 Male, age 80, both hemispheres 115.3
Nucleus ambiguus
nTPM: 171.4
2096 Female, age 85, both hemispheres 172.2
2071 Male, age 76, both hemispheres 170.5
Nucleus cuneatus
nTPM: 178.5
2564 Male, age 74, both hemispheres 232.9
2562 Male, age 61, both hemispheres 190.2
2805 Female, age 91, both hemispheres 188.8
2131 Male, age 76, both hemispheres 177.4
2376 Male, age 61, both hemispheres 176.2
2100 Male, age 76, both hemispheres 174.2
2380 Male, age 80, both hemispheres 169.5
2808 Female, age 85, both hemispheres 154.6
2381 Male, age 80, both hemispheres 142.5
Nucleus gracilis
nTPM: 181.5
2627 Male, age 74, both hemispheres 205.1
2299 Female, age 85, both hemispheres 192.9
2382 Male, age 80, both hemispheres 146.6
Nucleus raphe magnus
nTPM: 125.9
2051 Male, age 76, both hemispheres 164.0
2455 Male, age 74, both hemispheres 132.8
2328 Male, age 80, both hemispheres 120.8
2172 Female, age 85, both hemispheres 115.7
2160 Male, age 61, both hemispheres 114.0
2459 Female, age 91, both hemispheres 108.0
Nucleus raphe obscurus
nTPM: 155.2
2142 Male, age 76, midline 193.2
2800 Male, age 61, midline 156.0
2845 Female, age 85, midline 116.3
Nucleus raphe pallidus
nTPM: 183.4
1924 Male, age 61, midline 204.8
2145 Male, age 76, midline 177.3
2183 Male, age 80, midline 168.2
Nucleus tractus solitarii
nTPM: 150.5
2656 Male, age 76, both hemispheres 157.1
2307 Male, age 80, both hemispheres 155.0
2191 Female, age 85, both hemispheres 154.5
2144 Female, age 91, right hemisphere 135.3
Paramedian reticular nucleus
nTPM: 136.5
2057 Male, age 80, both hemispheres 158.4
2313 Male, age 61, both hemispheres 153.4
2050 Female, age 85, both hemispheres 123.9
2052 Male, age 76, both hemispheres 110.6
Parvicellular reticular nuclei
nTPM: 142.2
2119 Male, age 80, both hemispheres 173.4
2095 Male, age 76, both hemispheres 127.8
2558 Male, age 74, both hemispheres 125.5
Parvicellular reticular nuclei, medullary
nTPM: 158.6
2091 Female, age 85, both hemispheres 162.6
2181 Male, age 80, left hemisphere 160.3
2189 Female, age 91, both hemispheres 152.9
Pedunculopontine tegmental nucleus
nTPM: 177.6
2338 Male, age 61, both hemispheres 199.3
1921 Female, age 85, both hemispheres 173.1
2334 Male, age 80, both hemispheres 160.3
Peritrigeminal nucleus
nTPM: 171.0
2067 Female, age 85, both hemispheres 183.6
2179 Male, age 61, both hemispheres 173.7
2136 Male, age 76, both hemispheres 155.7
Pontine nuclei
nTPM: 118.1
2115 Male, age 80, left hemisphere 159.3
2787 Female, age 85, both hemispheres 133.9
1863 Male, age 55, unknown 130.0
1968 Male, age 76, left hemisphere 128.5
2109 Female, age 72, unknown 108.3
2319 Female, age 91, both hemispheres 105.5
2727 Male, age 61, right hemisphere 95.9
2454 Male, age 74, left hemisphere 83.3
Pontine raphe nucleus
nTPM: 133.9
2853 Male, age 76, midline 139.4
2122 Female, age 85, midline 128.4
Posteroventral cochlear nucleus
nTPM: 142.2
2371 Male, age 61, both hemispheres 180.4
2752 Female, age 85, both hemispheres 155.9
2341 Male, age 80, both hemispheres 135.2
2070 Male, age 76, both hemispheres 133.3
2135 Female, age 91, both hemispheres 106.3
Prepositus hypoglossal nucleus
nTPM: 154.9
2086 Male, age 80, both hemispheres 187.8
2855 Female, age 85, right hemisphere 122.0
Principal sensory trigeminal nucleus
nTPM: 125.1
2324 Male, age 76, both hemispheres 171.5
2158 Male, age 61, both hemispheres 119.6
2008 Male, age 80, left hemisphere 112.6
2367 Female, age 91, left hemisphere 96.6
Reticular pontine nucleus, caudal
nTPM: 116.8
2092 Male, age 76, both hemispheres 134.0
2332 Male, age 80, right hemisphere 118.7
2559 Male, age 74, both hemispheres 108.5
2457 Female, age 91, both hemispheres 105.8
Reticular pontine nucleus, oral
nTPM: 122.8
1939 Male, age 80, both hemispheres 162.5
2167 Male, age 76, both hemispheres 139.8
2012 Female, age 85, both hemispheres 130.1
2366 Female, age 91, both hemispheres 95.9
2361 Male, age 74, both hemispheres 85.6
Reticulotegmental nucleus
nTPM: 149.7
2333 Male, age 80, both hemispheres 169.2
2322 Female, age 91, both hemispheres 154.9
2452 Male, age 74, both hemispheres 144.1
2325 Male, age 76, both hemispheres 130.6
Spinal trigeminal nucleus, caudal
nTPM: 159.0
2642 Male, age 74, both hemispheres 176.8
2312 Male, age 61, both hemispheres 165.4
2308 Male, age 80, both hemispheres 156.0
2447 Male, age 76, both hemispheres 150.7
2390 Female, age 91, both hemispheres 146.3
Spinal trigeminal nucleus, interpolar
nTPM: 146.8
2625 Male, age 61, both hemispheres 177.0
2033 Male, age 80, both hemispheres 150.8
2066 Male, age 76, right hemisphere 137.2
2386 Female, age 85, both hemispheres 136.3
2389 Female, age 91, both hemispheres 132.7
Spinal trigeminal nucleus, oral
nTPM: 148.9
1978 Male, age 76, both hemispheres 151.6
2737 Female, age 85, both hemispheres 149.9
2164 Male, age 80, both hemispheres 145.3
Spinal vestibular nucleus
nTPM: 149.1
2796 Male, age 61, both hemispheres 168.4
2780 Male, age 80, both hemispheres 158.0
2186 Female, age 91, both hemispheres 150.6
2384 Male, age 74, both hemispheres 147.1
2806 Female, age 85, both hemispheres 142.5
2748 Male, age 76, both hemispheres 128.0
Subcoeruleus area
nTPM: 152.0
2323 Female, age 91, left hemisphere 171.1
2451 Male, age 74, both hemispheres 169.2
2089 Male, age 76, left hemisphere 144.8
1958 Male, age 80, both hemispheres 138.2
2369 Female, age 85, left hemisphere 136.6
Superior olive
nTPM: 117.1
2364 Male, age 74, right hemisphere 123.9
2020 Male, age 76, both hemispheres 120.2
2561 Female, age 91, both hemispheres 118.6
2329 Male, age 80, right hemisphere 115.8
1875 Female, age 85, both hemispheres 106.8
Superior vestibular nucleus
nTPM: 166.3
2061 Male, age 76, both hemispheres 183.5
2015 Male, age 80, both hemispheres 164.9
2383 Male, age 74, both hemispheres 150.4
Ventral medullary reticular nucleus
nTPM: 150.0
2372 Male, age 61, both hemispheres 161.3
2060 Male, age 76, both hemispheres 138.8
Ventral periolivary nuclei
nTPM: 121.7
2130 Female, age 85, both hemispheres 143.4
2165 Male, age 80, both hemispheres 128.4
2794 Female, age 91, left hemisphere 109.5
2023 Male, age 76, both hemispheres 105.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 162.0
2302 Female, age 91, both hemispheres 190.4
2180 Male, age 61, both hemispheres 175.0
2118 Male, age 80, both hemispheres 151.2
1986 Male, age 76, both hemispheres 147.1
2741 Female, age 85, both hemispheres 146.3
Ventrolateral tegmental area, A5 NE cell group
nTPM: 140.3
2359 Male, age 61, both hemispheres 181.8
2161 Male, age 80, both hemispheres 147.6
2840 Female, age 85, both hemispheres 133.0
1959 Male, age 76, both hemispheres 131.0
2456 Female, age 91, both hemispheres 128.2
2449 Male, age 74, both hemispheres 120.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 174.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 174.1
FF:10182-103D2 60 years, female 175.1
FF:10165-103B3 76 years, female 173.2
Medulla oblongata
Scaled Tags Per Million: 152.4
FF:10155-103A2 76 years, female 205.4
FF:10038-101F2 18-64 years, mixed 162.7
FF:10174-103C3 60 years, female 89.0
Pons
Scaled Tags Per Million: 101.6
FF:10033-101E6 18-54 years, mixed 101.6

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 129.9
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 129.9
Samples: 4

Max nTPM: 137.6
Min nTPM: 121.2
Sample A Female 128.0
Sample B Female 137.6
Sample C Male 132.7
Sample D Male 121.2
Pons
nTPM: 110.8
Samples: 4

Max nTPM: 135.1
Min nTPM: 99.6
Sample A Female 135.1
Sample B Female 106.5
Sample C Male 101.8
Sample D Male 99.6

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 15.7
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 15.7
Samples: 4

Max nTPM: 20.8
Min nTPM: 12.7
Sample A Male 20.8
Sample B Male 14.0
Sample C Female 12.7
Sample D Female 15.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 3.7
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 3.7
69736244 Antisense, RP_050503_04_D06, Mouse strain C57BL/6J (56 days, male) 3.7
Pons
Expression energy: 3.5
69736244 Antisense, RP_050503_04_D06, Mouse strain C57BL/6J (56 days, male) 3.5

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