PONS AND MEDULLA - Expression summary
Protein expressioni No data
RNA expressioni
HPA Brain:198.5 nTPM
FANTOM5:212.2 Scaled Tags Per Million
Pig:52.0 nTPM
Mouse:69.8 nTPM
Allen mouse:7.6 Expression energy

PONS AND MEDULLA - HPA Brain RNA-seq
Max subtype nTPMi 198.5
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 123.3
1984 Male, age 76, both hemispheres 140.6
2090 Male, age 80, both hemispheres 121.7
2188 Female, age 91, both hemispheres 117.4
2301 Female, age 85, both hemispheres 113.7
Area postrema
nTPM: 141.8
2799 Male, age 61, both hemispheres 162.2
2054 Male, age 76, both hemispheres 149.7
2306 Male, age 80, both hemispheres 113.4
Dorsal cochlear nucleus
nTPM: 149.2
2802 Male, age 74, right hemisphere 168.1
2370 Male, age 61, both hemispheres 165.8
2058 Male, age 76, both hemispheres 155.6
2378 Male, age 80, both hemispheres 128.7
2187 Female, age 91, both hemispheres 127.9
Dorsal medullary reticular nucleus
nTPM: 158.1
2040 Female, age 85, both hemispheres 175.1
2088 Male, age 76, both hemispheres 154.4
2373 Male, age 61, both hemispheres 144.7
Dorsal motor vagal complex
nTPM: 168.1
2844 Male, age 55, unknown 212.1
2797 Male, age 61, both hemispheres 183.6
2643 Male, age 74, both hemispheres 176.8
2133 Female, age 91, both hemispheres 174.8
2813 Female, age 72, unknown 173.3
2000 Male, age 74, unknown 159.4
2185 Male, age 76, both hemispheres 142.7
2807 Female, age 85, both hemispheres 122.2
Dorsal tegmental nucleus
nTPM: 140.6
2083 Male, age 80, both hemispheres 163.5
2326 Male, age 74, both hemispheres 135.7
1936 Male, age 76, left hemisphere 134.0
2358 Male, age 61, both hemispheres 129.1
Dorsolateral tegmental area
nTPM: 145.6
2141 Male, age 76, both hemispheres 175.8
2654 Male, age 80, both hemispheres 165.2
2751 Female, age 85, both hemispheres 138.9
2360 Male, age 74, both hemispheres 137.9
2337 Male, age 61, both hemispheres 110.2
Gigantocellular reticular nuclei, medullary
nTPM: 145.4
2462 Male, age 74, both hemispheres 170.2
1876 Female, age 85, both hemispheres 155.4
2022 Male, age 76, right hemisphere 154.4
2310 Male, age 80, both hemispheres 137.2
2387 Female, age 91, both hemispheres 136.4
2314 Male, age 61, both hemispheres 118.9
Gigantocellular reticular nuclei, pars
nTPM: 145.5
2336 Male, age 61, both hemispheres 164.0
2168 Male, age 76, both hemispheres 161.1
2084 Female, age 85, both hemispheres 160.0
2706 Male, age 80, both hemispheres 124.2
2330 Male, age 80, both hemispheres 118.2
Inferior olive
nTPM: 132.4
2563 Male, age 74, both hemispheres 143.3
2085 Female, age 85, both hemispheres 136.3
2628 Female, age 91, both hemispheres 129.3
2379 Male, age 80, both hemispheres 128.7
2178 Male, age 61, both hemispheres 124.2
Kolliker-Fuse nucleus
nTPM: 129.3
2163 Male, age 80, both hemispheres 157.0
2793 Female, age 91, left hemisphere 125.4
2315 Male, age 76, right hemisphere 105.5
Lateral lemniscal nuclei
nTPM: 146.9
2036 Male, age 80, both hemispheres 155.0
2169 Male, age 76, both hemispheres 153.2
2453 Male, age 74, right hemisphere 152.0
2746 Female, age 85, left hemisphere 151.2
2320 Female, age 91, left hemisphere 123.2
Lateral medullary reticular nucleus
nTPM: 131.6
2804 Female, age 91, both hemispheres 149.5
2044 Male, age 76, both hemispheres 139.2
2374 Male, age 61, both hemispheres 131.3
2190 Female, age 85, both hemispheres 131.1
2852 Male, age 80, both hemispheres 122.7
2305 Male, age 74, both hemispheres 115.8
Lateral parabrachial nucleus
nTPM: 144.5
2139 Female, age 85, right hemisphere 167.1
2790 Male, age 61, both hemispheres 163.9
2013 Male, age 80, both hemispheres 136.2
2792 Male, age 76, both hemispheres 110.9
Lateral vestibular nucleus
nTPM: 138.0
2184 Male, age 76, both hemispheres 146.1
2311 Male, age 80, both hemispheres 129.9
Locus coeruleus
nTPM: 198.5
2014 Male, age 55, unknown 234.0
2317 Female, age 72, unknown 210.3
2123 Female, age 91, both hemispheres 201.3
1980 Male, age 76, both hemispheres 199.8
2720 Male, age 74, both hemispheres 183.9
2788 Male, age 74, unknown 182.1
2162 Male, age 80, both hemispheres 178.3
Medial olivary nucleus
nTPM: 110.3
2138 Female, age 91, both hemispheres 129.6
2851 Male, age 80, both hemispheres 110.9
1943 Male, age 61, both hemispheres 103.7
1962 Male, age 76, both hemispheres 96.9
Medial parabrachial nucleus
nTPM: 144.5
2786 Male, age 76, both hemispheres 159.0
2156 Male, age 61, both hemispheres 153.1
2170 Female, age 91, both hemispheres 141.9
2854 Male, age 80, both hemispheres 134.6
2463 Female, age 85, right hemisphere 133.9
Medial periolivary nuclei
nTPM: 139.4
2171 Female, age 85, both hemispheres 168.2
2063 Male, age 76, both hemispheres 158.1
2791 Male, age 74, right hemisphere 141.5
2081 Male, age 80, both hemispheres 115.9
2458 Female, age 91, both hemispheres 113.2
Medial vestibular nucleus
nTPM: 151.7
2134 Male, age 76, both hemispheres 158.2
2624 Male, age 61, both hemispheres 156.4
2743 Female, age 85, both hemispheres 156.1
2093 Male, age 80, both hemispheres 154.2
2803 Female, age 91, both hemispheres 149.1
2801 Male, age 74, both hemispheres 135.9
Motor facial nucleus
nTPM: 144.4
2062 Male, age 76, both hemispheres 170.8
2795 Female, age 91, both hemispheres 146.7
2126 Male, age 61, both hemispheres 146.2
2365 Male, age 74, right hemisphere 143.5
2327 Male, age 80, both hemispheres 134.1
2697 Female, age 85, both hemispheres 124.8
Motor hypoglossal nucleus
nTPM: 158.8
2277 Male, age 76, both hemispheres 169.9
2132 Female, age 85, both hemispheres 166.7
2461 Male, age 61, both hemispheres 163.1
2125 Female, age 91, both hemispheres 159.4
2182 Male, age 80, both hemispheres 134.9
Motor trigeminal nucleus
nTPM: 143.2
2335 Male, age 61, both hemispheres 157.0
2309 Male, age 76, both hemispheres 152.0
2560 Male, age 74, both hemispheres 146.6
2079 Male, age 80, both hemispheres 140.2
2321 Female, age 91, both hemispheres 120.1
Nuclei of the trapezoid body
nTPM: 150.1
2735 Female, age 85, both hemispheres 178.7
2159 Male, age 61, both hemispheres 157.6
1983 Male, age 76, both hemispheres 155.7
2368 Female, age 91, both hemispheres 131.0
2166 Male, age 80, both hemispheres 127.6
Nucleus ambiguus
nTPM: 159.7
2096 Female, age 85, both hemispheres 201.2
2071 Male, age 76, both hemispheres 118.2
Nucleus cuneatus
nTPM: 139.4
2562 Male, age 61, both hemispheres 181.5
2564 Male, age 74, both hemispheres 162.8
2131 Male, age 76, both hemispheres 153.6
2805 Female, age 91, both hemispheres 147.8
2100 Male, age 76, both hemispheres 142.7
2376 Male, age 61, both hemispheres 138.3
2381 Male, age 80, both hemispheres 119.4
2380 Male, age 80, both hemispheres 107.0
2808 Female, age 85, both hemispheres 101.5
Nucleus gracilis
nTPM: 119.9
2627 Male, age 74, both hemispheres 135.2
2382 Male, age 80, both hemispheres 113.2
2299 Female, age 85, both hemispheres 111.3
Nucleus raphe magnus
nTPM: 149.4
2160 Male, age 61, both hemispheres 174.7
2172 Female, age 85, both hemispheres 170.1
2455 Male, age 74, both hemispheres 155.8
2328 Male, age 80, both hemispheres 134.5
2051 Male, age 76, both hemispheres 130.7
2459 Female, age 91, both hemispheres 130.5
Nucleus raphe obscurus
nTPM: 127.8
2800 Male, age 61, midline 147.7
2845 Female, age 85, midline 127.3
2142 Male, age 76, midline 108.5
Nucleus raphe pallidus
nTPM: 120.7
2183 Male, age 80, midline 144.9
1924 Male, age 61, midline 125.0
2145 Male, age 76, midline 92.2
Nucleus tractus solitarii
nTPM: 152.4
2656 Male, age 76, both hemispheres 196.2
2144 Female, age 91, right hemisphere 153.7
2191 Female, age 85, both hemispheres 130.3
2307 Male, age 80, both hemispheres 129.5
Paramedian reticular nucleus
nTPM: 156.3
2313 Male, age 61, both hemispheres 191.3
2057 Male, age 80, both hemispheres 162.6
2050 Female, age 85, both hemispheres 157.6
2052 Male, age 76, both hemispheres 113.7
Parvicellular reticular nuclei
nTPM: 144.3
2558 Male, age 74, both hemispheres 157.2
2119 Male, age 80, both hemispheres 147.1
2095 Male, age 76, both hemispheres 128.8
Parvicellular reticular nuclei, medullary
nTPM: 164.3
2181 Male, age 80, left hemisphere 169.0
2189 Female, age 91, both hemispheres 167.0
2091 Female, age 85, both hemispheres 156.8
Pedunculopontine tegmental nucleus
nTPM: 149.9
1921 Female, age 85, both hemispheres 176.7
2334 Male, age 80, both hemispheres 154.6
2338 Male, age 61, both hemispheres 118.3
Peritrigeminal nucleus
nTPM: 139.7
2179 Male, age 61, both hemispheres 152.9
2067 Female, age 85, both hemispheres 142.8
2136 Male, age 76, both hemispheres 123.5
Pontine nuclei
nTPM: 151.8
2787 Female, age 85, both hemispheres 200.5
2727 Male, age 61, right hemisphere 172.3
1863 Male, age 55, unknown 163.3
2109 Female, age 72, unknown 158.1
1968 Male, age 76, left hemisphere 151.9
2454 Male, age 74, left hemisphere 126.2
2115 Male, age 80, left hemisphere 125.5
2319 Female, age 91, both hemispheres 116.6
Pontine raphe nucleus
nTPM: 168.9
2122 Female, age 85, midline 170.0
2853 Male, age 76, midline 167.8
Posteroventral cochlear nucleus
nTPM: 136.9
2752 Female, age 85, both hemispheres 170.8
2070 Male, age 76, both hemispheres 151.5
2371 Male, age 61, both hemispheres 150.0
2135 Female, age 91, both hemispheres 110.0
2341 Male, age 80, both hemispheres 102.4
Prepositus hypoglossal nucleus
nTPM: 147.9
2086 Male, age 80, both hemispheres 148.8
2855 Female, age 85, right hemisphere 147.0
Principal sensory trigeminal nucleus
nTPM: 144.1
2158 Male, age 61, both hemispheres 169.3
2008 Male, age 80, left hemisphere 152.8
2324 Male, age 76, both hemispheres 137.8
2367 Female, age 91, left hemisphere 116.5
Reticular pontine nucleus, caudal
nTPM: 132.5
2559 Male, age 74, both hemispheres 139.1
2092 Male, age 76, both hemispheres 135.7
2332 Male, age 80, right hemisphere 134.9
2457 Female, age 91, both hemispheres 120.3
Reticular pontine nucleus, oral
nTPM: 137.8
2012 Female, age 85, both hemispheres 152.0
1939 Male, age 80, both hemispheres 148.7
2167 Male, age 76, both hemispheres 141.3
2361 Male, age 74, both hemispheres 134.6
2366 Female, age 91, both hemispheres 112.6
Reticulotegmental nucleus
nTPM: 142.0
2452 Male, age 74, both hemispheres 156.0
2325 Male, age 76, both hemispheres 145.4
2333 Male, age 80, both hemispheres 138.0
2322 Female, age 91, both hemispheres 128.7
Spinal trigeminal nucleus, caudal
nTPM: 147.1
2390 Female, age 91, both hemispheres 166.8
2447 Male, age 76, both hemispheres 156.8
2642 Male, age 74, both hemispheres 148.3
2308 Male, age 80, both hemispheres 136.5
2312 Male, age 61, both hemispheres 127.2
Spinal trigeminal nucleus, interpolar
nTPM: 160.0
2625 Male, age 61, both hemispheres 183.9
2033 Male, age 80, both hemispheres 163.3
2386 Female, age 85, both hemispheres 159.0
2066 Male, age 76, right hemisphere 153.1
2389 Female, age 91, both hemispheres 140.7
Spinal trigeminal nucleus, oral
nTPM: 152.2
1978 Male, age 76, both hemispheres 158.7
2737 Female, age 85, both hemispheres 155.2
2164 Male, age 80, both hemispheres 142.6
Spinal vestibular nucleus
nTPM: 154.8
2780 Male, age 80, both hemispheres 170.3
2186 Female, age 91, both hemispheres 163.5
2796 Male, age 61, both hemispheres 157.0
2384 Male, age 74, both hemispheres 151.5
2748 Male, age 76, both hemispheres 144.0
2806 Female, age 85, both hemispheres 142.5
Subcoeruleus area
nTPM: 151.1
2323 Female, age 91, left hemisphere 170.0
2451 Male, age 74, both hemispheres 161.5
1958 Male, age 80, both hemispheres 155.0
2089 Male, age 76, left hemisphere 143.2
2369 Female, age 85, left hemisphere 126.0
Superior olive
nTPM: 137.5
1875 Female, age 85, both hemispheres 170.6
2020 Male, age 76, both hemispheres 136.0
2364 Male, age 74, right hemisphere 133.1
2329 Male, age 80, right hemisphere 124.7
2561 Female, age 91, both hemispheres 122.9
Superior vestibular nucleus
nTPM: 139.4
2015 Male, age 80, both hemispheres 149.8
2061 Male, age 76, both hemispheres 138.7
2383 Male, age 74, both hemispheres 129.6
Ventral medullary reticular nucleus
nTPM: 157.7
2060 Male, age 76, both hemispheres 172.0
2372 Male, age 61, both hemispheres 143.5
Ventral periolivary nuclei
nTPM: 140.9
2130 Female, age 85, both hemispheres 159.0
2165 Male, age 80, both hemispheres 147.6
2023 Male, age 76, both hemispheres 135.0
2794 Female, age 91, left hemisphere 121.9
Ventrolateral medulla, A1-C1 cell groups
nTPM: 136.3
2741 Female, age 85, both hemispheres 153.2
2180 Male, age 61, both hemispheres 141.1
1986 Male, age 76, both hemispheres 134.7
2302 Female, age 91, both hemispheres 133.0
2118 Male, age 80, both hemispheres 119.9
Ventrolateral tegmental area, A5 NE cell group
nTPM: 138.6
2449 Male, age 74, both hemispheres 148.1
2359 Male, age 61, both hemispheres 146.4
1959 Male, age 76, both hemispheres 142.3
2840 Female, age 85, both hemispheres 136.0
2161 Male, age 80, both hemispheres 132.7
2456 Female, age 91, both hemispheres 126.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 212.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 163.9
FF:10182-103D2 60 years, female 170.4
FF:10165-103B3 76 years, female 157.4
Medulla oblongata
Scaled Tags Per Million: 149.1
FF:10038-101F2 18-64 years, mixed 203.8
FF:10155-103A2 76 years, female 139.5
FF:10174-103C3 60 years, female 104.1
Pons
Scaled Tags Per Million: 212.2
FF:10033-101E6 18-54 years, mixed 212.2

PONS AND MEDULLA - Pig RNA-seqi
Max subtype nTPMi 52.0
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 34.6
Samples: 4

Max nTPM: 38.2
Min nTPM: 26.8
Sample A Female 38.2
Sample B Female 36.7
Sample C Male 36.6
Sample D Male 26.8
Pons
nTPM: 52.1
Samples: 4

Max nTPM: 76.1
Min nTPM: 42.1
Sample A Female 76.1
Sample B Female 45.1
Sample C Male 44.9
Sample D Male 42.1

PONS AND MEDULLA - Mouse RNA-seqi
Max subtype nTPMi 69.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 69.8
Samples: 4

Max nTPM: 72.0
Min nTPM: 68.3
Sample A Male 72.0
Sample B Male 69.7
Sample C Female 69.3
Sample D Female 68.3

PONS AND MEDULLA - Allen Mouse ISHi
Max subtype Expression energyi 7.6
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 7.6
70194624 Antisense, RP_050517_01_G05, Mouse strain C57BL/6J (56 days, male) 7.7
74957911 Antisense, RP_060315_05_A08, Mouse strain C57BL/6J (56 days, male) 7.5
Pons
Expression energy: 7.5
74957911 Antisense, RP_060315_05_A08, Mouse strain C57BL/6J (56 days, male) 8.3
70194624 Antisense, RP_050517_01_G05, Mouse strain C57BL/6J (56 days, male) 6.7

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