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FBXL16
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  • FBXL16
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM
ENDOMETRIUM EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MIDBRAIN NASOPHARYNX
ORAL MUCOSA OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE
SMOOTH MUSCLE SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
GTEx:470.7 nTPM
FANTOM5:744.1 Scaled Tags Per Million
Pig:914.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Antibody HPA039504Antibody HPA056354
Glial cells Not detectedNot detected
Neuronal cells HighMedium





CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

470.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 470.7
Samples: 246

Max nTPM: 1596.5
Min nTPM: 15.5
Std nTPM: 347.2
Median nTPM: 419.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 1596.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 1378.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 1372.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 1247.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 1205.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 1163.9
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 1152.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 1135.4
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 1126.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 1125.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 1080.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 1061.7
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 1046.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 1032.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 1031.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 1029.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 1028.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 1023.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 1019.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 1007.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 1002.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 997.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 982.5
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 946.7
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 936.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 936.4
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 934.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 934.8
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 930.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 925.6
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 912.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 911.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 899.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 890.3
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 885.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 880.1
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 876.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 862.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 861.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 860.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 857.7
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 854.7
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 843.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 835.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 826.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 821.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 819.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 805.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 799.9
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 799.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 787.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 782.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 777.0
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 772.9
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 772.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 770.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 766.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 762.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 759.5
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 757.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 748.7
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 744.5
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 731.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 717.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 713.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 712.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 709.3
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 707.5
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 704.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 686.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 681.8
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 681.1
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 681.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 670.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 669.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 665.0
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 661.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 657.2
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 649.1
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 648.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 642.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 642.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 637.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 626.9
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 624.1
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 620.2
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 613.8
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 606.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 606.4
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 601.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 591.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 588.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 586.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 584.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 583.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 580.9
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 579.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 578.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 576.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 548.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 537.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 536.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 531.9
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 526.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 522.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 519.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 519.8
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 518.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 514.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 513.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 498.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 497.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 495.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 493.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 477.3
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 473.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 471.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 470.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 452.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 450.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 447.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 442.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 421.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 417.8
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 416.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 406.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 403.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 398.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 385.6
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 384.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 379.5
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 377.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 374.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 371.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 368.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 366.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 365.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 356.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 352.1
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 350.3
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 349.8
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 334.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 320.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 319.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 316.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 307.3
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 304.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 301.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 300.5
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 297.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 296.6
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 294.3
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 291.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 264.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 262.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 256.3
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 250.8
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 247.8
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 225.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 225.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 218.5
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 216.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 215.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 215.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 213.1
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 208.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 207.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 204.9
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 196.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 192.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 191.9
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 191.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 185.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 183.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 181.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 179.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 178.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 176.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 174.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 172.4
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 159.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 159.2
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 157.4
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 156.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 153.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 148.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 140.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 135.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 132.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 124.8
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 124.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 124.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 124.0
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 122.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 117.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 113.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 109.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 104.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 101.0
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 98.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 93.7
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 93.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 91.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 91.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 88.4
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 85.5
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 83.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 82.7
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 78.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 76.5
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 75.7
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 72.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 72.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 70.7
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 68.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 66.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 63.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 62.2
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 58.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 53.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 52.0
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 51.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 50.8
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 49.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 48.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 47.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 45.1
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 43.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 41.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 41.4
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 36.4
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 35.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 32.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 29.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 28.7
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 28.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 27.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 26.6
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 26.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 23.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 21.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 18.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 15.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Max subtype Scaled Tags Per Millioni

Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.

744.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 744.1
FF:10164-103B2 76 years, female 744.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

914.3
Pig sample Sample description nTPM
Caudate
nTPM: 914.3
Samples: 4

Max nTPM: 1195.1
Min nTPM: 569.3
Sample A Female 569.3
Sample B Female 1003.2
Sample C Male 1195.1
Sample D Male 889.4

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